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The map label for this gene is 77461795

Identifier: 77461795

GI number: 77461795

Start: 6242365

End: 6244590

Strand: Reverse

Name: 77461795

Synonym: Pfl01_5574

Alternate gene names: NA

Gene position: 6244590-6242365 (Counterclockwise)

Preceding gene: 77461796

Following gene: 77461794

Centisome position: 96.99

GC content: 59.84

Gene sequence:

>2226_bases
ATGTTCAACCCAGCTAACGAAACGCACTTCAGCCTGACCGTTGAAGATTACGTAGGCGACCTGCAAGTCCTGTCGTTCAC
CGGCACCGAAGGCATCAGCCAGCCGTTCCGTTTCGACATCGAACTGGTCAGCGAAAACCCGGATCTGGACCTGGAAAAGC
TCCTGCACAAACAGGCCTTCCTCGCCCTCGATCCGCAGGGCTCGGGTATCCACGGCCAGATCTACCGCGTGGCCCAGGGC
GATGCCGGCAAGCGCCTGACCCGCTACAAAGTCTCGCTGGTGCCGCAGCTGCAATACCTGCATCACCGCACCAACCAGCG
CATCTACCAGCAGATGTCGGCGCCGAAAATCATCGCACTGATCCTCGACGAGCACGGCATCAAGGGCAACGCCTACAGCT
TTCAGTTGAGCCAGCCGTGCCCGGACCGCGACTACTGCGTGCAGTACGACGAAACCGATCTGCACTTCGTCCAGCGCCTG
TGCGAAGAAGAGGGGATTCACTACCACTTCCAGCACAGCAAGAAAGGTCATCTGCTGGTGTTCGGCGATGACCAGACCGT
GTTCCCCAACCTCGGACAACCGACCGCGTATGTACAGGGCAGCGGCATGGTCGCCGAAGAACCGGTGATCAAAGGCTTCA
AGCTGCGTCTGGAAACCCGCACCAGCCGCACCACCCGCCGCGACTACGATTTCGAGAAACCGCGCCTGCAAATGGAGGCG
GCGTACAAACCGGACGGCGAGAGCACTGAACCGGATCTCGAAGACTACGACTACCCCGGCCGTTTCATCGACCGCGCGCG
CGGCAAGTTCCTCAGCCAGCGCGCCCTCGAACGCCACCGTGCCGACTACCGCCAGGCCGAAGGTCGCGGTGACCAGACCA
GACTCGTCAGCGGCCACTTCATGGAAATGTCCGACCACCCGCGCAGCGAGTGGAACGACCTGTGGCTGCTCACCGAAATT
TTCCACGAAGGCAAACAGCCGCAAGTCCTCGAAGAATCGGTGACCAGCGACACCACCGACAACAAGGACGACTTCCACCA
GGGCTACCGCAACCGCTTCCTCGCCACCCCGTGGGACGTGTTCTACCGCCCCGCGCTCGAACACCCGAAACCCCGCGTGC
TCGGCAGCCAGACCGCGATGGTCACCGGCCCCAAAGGCGAAGAAATCCACTGCGACCAATACGGCCGCATCAAAGTGCAA
TTCCACTGGGACCGCGAAGGCCTGGCCGACGACAAAACCAGCTGCTGGCTGCGCGTCTCCAGCTCCTGGGCCGGCGACCG
CTACGGCGCCATCTCCATCCCGCGCATCGGCATGGAAGTCCTCGTCACCTTCCTCGAAGGCGACCCCGATCAACCGCTGG
TCACCGGCTGCCTGTACCACAAGGAAAACCCGGTGCCGTACGCCTTGCCGGCAAACAAAACCCGCAGCGTCTTCAAAACC
CTCAGCTCCCCGGGCGGCGGTGGCTACAACGAACTGCGCATCGAAGACAAAAAAGGCGCCGAACAGATATTCATCCACGC
CCAGCGGGACTGGGATGAAAACGTTGAGCACGACCAGAAGATTCGCGTCGGGAATGAACGTCACGACACGGTGGTGAAGA
ACAGCTACACCGAGCTCAAGGCAGAAGAACACCGCACCACCATAAGCGACCGCAAGATCGAAGCGAAAGCCGACGATCAC
CTGACGGTAGGAGAAAGCCAGCACATCAAGCTCGGTACCGCCCAGTTGACCAGTGTGGGGAAAGAGATCCACCTGAAGTC
TGGCGACAAGATGGTGATTGAGGCTGGCACCGAACTGACCATTCTGGGCGGTGGGAGCTTTATCAAGCTCGATGGCGGTG
GTGTGACGGTGGTTGGACCGGTGGTGAAGATCAATGCCGGAGGCTCGGCGGGAAGCGGTACGGGGATTGGCATTCTGGCA
CCGGTCATTCCGCTGATTGCGGATCAGGCTAGGGCGGGGAACACACTGAAGTCTGGTACTGCCAATAGTCCGAAGTATGA
CGAACAAATCCGTTTTGTGACCGGGCTCGGTCAACCCATAAAGTCTGTGAAGGCAGCGATTATTGTCCCTTCGTCGGTCG
CTCCTAAAATCTCCAAAAGCAACGCAGATGGTCTGCATCCGCGTGTGGTGACTGACAGCGAGGAAACCGCTGAGGTCCAT
CTGATGTGGGACGAACTCATCGTGCCGGAAGGCTCCGACGATTACGAAGCGAGTAGAAATAAATGA

Upstream 100 bases:

>100_bases
TCTGCCGAACAATTGCGTGACGCCTTGGGCGCCACTTCGTCCTGGCTGCAGCGTTTGCGACTGCGGGCGTAACGGATGAC
ATTCGAACAGGGAGCACTTT

Downstream 100 bases:

>100_bases
GCGCACCCGTTGCTACATTCAAAACCAATAACCAAAGCTGCTCCGTTCAAGACATCACGTTGAAATGCGACAAGCTATGG
ACGATGGGGCAGCAAGAGGC

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; VgrG-Like Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 741; Mature: 741

Protein sequence:

>741_residues
MFNPANETHFSLTVEDYVGDLQVLSFTGTEGISQPFRFDIELVSENPDLDLEKLLHKQAFLALDPQGSGIHGQIYRVAQG
DAGKRLTRYKVSLVPQLQYLHHRTNQRIYQQMSAPKIIALILDEHGIKGNAYSFQLSQPCPDRDYCVQYDETDLHFVQRL
CEEEGIHYHFQHSKKGHLLVFGDDQTVFPNLGQPTAYVQGSGMVAEEPVIKGFKLRLETRTSRTTRRDYDFEKPRLQMEA
AYKPDGESTEPDLEDYDYPGRFIDRARGKFLSQRALERHRADYRQAEGRGDQTRLVSGHFMEMSDHPRSEWNDLWLLTEI
FHEGKQPQVLEESVTSDTTDNKDDFHQGYRNRFLATPWDVFYRPALEHPKPRVLGSQTAMVTGPKGEEIHCDQYGRIKVQ
FHWDREGLADDKTSCWLRVSSSWAGDRYGAISIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENPVPYALPANKTRSVFKT
LSSPGGGGYNELRIEDKKGAEQIFIHAQRDWDENVEHDQKIRVGNERHDTVVKNSYTELKAEEHRTTISDRKIEAKADDH
LTVGESQHIKLGTAQLTSVGKEIHLKSGDKMVIEAGTELTILGGGSFIKLDGGGVTVVGPVVKINAGGSAGSGTGIGILA
PVIPLIADQARAGNTLKSGTANSPKYDEQIRFVTGLGQPIKSVKAAIIVPSSVAPKISKSNADGLHPRVVTDSEETAEVH
LMWDELIVPEGSDDYEASRNK

Sequences:

>Translated_741_residues
MFNPANETHFSLTVEDYVGDLQVLSFTGTEGISQPFRFDIELVSENPDLDLEKLLHKQAFLALDPQGSGIHGQIYRVAQG
DAGKRLTRYKVSLVPQLQYLHHRTNQRIYQQMSAPKIIALILDEHGIKGNAYSFQLSQPCPDRDYCVQYDETDLHFVQRL
CEEEGIHYHFQHSKKGHLLVFGDDQTVFPNLGQPTAYVQGSGMVAEEPVIKGFKLRLETRTSRTTRRDYDFEKPRLQMEA
AYKPDGESTEPDLEDYDYPGRFIDRARGKFLSQRALERHRADYRQAEGRGDQTRLVSGHFMEMSDHPRSEWNDLWLLTEI
FHEGKQPQVLEESVTSDTTDNKDDFHQGYRNRFLATPWDVFYRPALEHPKPRVLGSQTAMVTGPKGEEIHCDQYGRIKVQ
FHWDREGLADDKTSCWLRVSSSWAGDRYGAISIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENPVPYALPANKTRSVFKT
LSSPGGGGYNELRIEDKKGAEQIFIHAQRDWDENVEHDQKIRVGNERHDTVVKNSYTELKAEEHRTTISDRKIEAKADDH
LTVGESQHIKLGTAQLTSVGKEIHLKSGDKMVIEAGTELTILGGGSFIKLDGGGVTVVGPVVKINAGGSAGSGTGIGILA
PVIPLIADQARAGNTLKSGTANSPKYDEQIRFVTGLGQPIKSVKAAIIVPSSVAPKISKSNADGLHPRVVTDSEETAEVH
LMWDELIVPEGSDDYEASRNK
>Mature_741_residues
MFNPANETHFSLTVEDYVGDLQVLSFTGTEGISQPFRFDIELVSENPDLDLEKLLHKQAFLALDPQGSGIHGQIYRVAQG
DAGKRLTRYKVSLVPQLQYLHHRTNQRIYQQMSAPKIIALILDEHGIKGNAYSFQLSQPCPDRDYCVQYDETDLHFVQRL
CEEEGIHYHFQHSKKGHLLVFGDDQTVFPNLGQPTAYVQGSGMVAEEPVIKGFKLRLETRTSRTTRRDYDFEKPRLQMEA
AYKPDGESTEPDLEDYDYPGRFIDRARGKFLSQRALERHRADYRQAEGRGDQTRLVSGHFMEMSDHPRSEWNDLWLLTEI
FHEGKQPQVLEESVTSDTTDNKDDFHQGYRNRFLATPWDVFYRPALEHPKPRVLGSQTAMVTGPKGEEIHCDQYGRIKVQ
FHWDREGLADDKTSCWLRVSSSWAGDRYGAISIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENPVPYALPANKTRSVFKT
LSSPGGGGYNELRIEDKKGAEQIFIHAQRDWDENVEHDQKIRVGNERHDTVVKNSYTELKAEEHRTTISDRKIEAKADDH
LTVGESQHIKLGTAQLTSVGKEIHLKSGDKMVIEAGTELTILGGGSFIKLDGGGVTVVGPVVKINAGGSAGSGTGIGILA
PVIPLIADQARAGNTLKSGTANSPKYDEQIRFVTGLGQPIKSVKAAIIVPSSVAPKISKSNADGLHPRVVTDSEETAEVH
LMWDELIVPEGSDDYEASRNK

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82999; Mature: 82999

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNPANETHFSLTVEDYVGDLQVLSFTGTEGISQPFRFDIELVSENPDLDLEKLLHKQAF
CCCCCCCCEEEEEHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHE
LALDPQGSGIHGQIYRVAQGDAGKRLTRYKVSLVPQLQYLHHRTNQRIYQQMSAPKIIAL
EEECCCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEE
ILDEHGIKGNAYSFQLSQPCPDRDYCVQYDETDLHFVQRLCEEEGIHYHFQHSKKGHLLV
EEECCCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCCCCEEEE
FGDDQTVFPNLGQPTAYVQGSGMVAEEPVIKGFKLRLETRTSRTTRRDYDFEKPRLQMEA
ECCCCEECCCCCCCEEEEECCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEE
AYKPDGESTEPDLEDYDYPGRFIDRARGKFLSQRALERHRADYRQAEGRGDQTRLVSGHF
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEE
MEMSDHPRSEWNDLWLLTEIFHEGKQPQVLEESVTSDTTDNKDDFHQGYRNRFLATPWDV
EECCCCCCCCHHHEEEEHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHH
FYRPALEHPKPRVLGSQTAMVTGPKGEEIHCDQYGRIKVQFHWDREGLADDKTSCWLRVS
HHCCCCCCCCCCEECCCEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEE
SSWAGDRYGAISIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENPVPYALPANKTRSVFKT
CCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCHHHHHHHH
LSSPGGGGYNELRIEDKKGAEQIFIHAQRDWDENVEHDQKIRVGNERHDTVVKNSYTELK
HCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHCCHHHHH
AEEHRTTISDRKIEAKADDHLTVGESQHIKLGTAQLTSVGKEIHLKSGDKMVIEAGTELT
HHHHHCCCCCCEEECCCCCCEECCCCCEEEECHHHHHHCCCEEEECCCCEEEEECCCEEE
ILGGGSFIKLDGGGVTVVGPVVKINAGGSAGSGTGIGILAPVIPLIADQARAGNTLKSGT
EEECCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
ANSPKYDEQIRFVTGLGQPIKSVKAAIIVPSSVAPKISKSNADGLHPRVVTDSEETAEVH
CCCCCHHHHEEEEHHCCCHHHHCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEE
LMWDELIVPEGSDDYEASRNK
EEEEHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MFNPANETHFSLTVEDYVGDLQVLSFTGTEGISQPFRFDIELVSENPDLDLEKLLHKQAF
CCCCCCCCEEEEEHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHE
LALDPQGSGIHGQIYRVAQGDAGKRLTRYKVSLVPQLQYLHHRTNQRIYQQMSAPKIIAL
EEECCCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEE
ILDEHGIKGNAYSFQLSQPCPDRDYCVQYDETDLHFVQRLCEEEGIHYHFQHSKKGHLLV
EEECCCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCCCCEEEE
FGDDQTVFPNLGQPTAYVQGSGMVAEEPVIKGFKLRLETRTSRTTRRDYDFEKPRLQMEA
ECCCCEECCCCCCCEEEEECCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEE
AYKPDGESTEPDLEDYDYPGRFIDRARGKFLSQRALERHRADYRQAEGRGDQTRLVSGHF
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEE
MEMSDHPRSEWNDLWLLTEIFHEGKQPQVLEESVTSDTTDNKDDFHQGYRNRFLATPWDV
EECCCCCCCCHHHEEEEHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHH
FYRPALEHPKPRVLGSQTAMVTGPKGEEIHCDQYGRIKVQFHWDREGLADDKTSCWLRVS
HHCCCCCCCCCCEECCCEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEE
SSWAGDRYGAISIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENPVPYALPANKTRSVFKT
CCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCHHHHHHHH
LSSPGGGGYNELRIEDKKGAEQIFIHAQRDWDENVEHDQKIRVGNERHDTVVKNSYTELK
HCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHCCHHHHH
AEEHRTTISDRKIEAKADDHLTVGESQHIKLGTAQLTSVGKEIHLKSGDKMVIEAGTELT
HHHHHCCCCCCEEECCCCCCEECCCCCEEEECHHHHHHCCCEEEECCCCEEEEECCCEEE
ILGGGSFIKLDGGGVTVVGPVVKINAGGSAGSGTGIGILAPVIPLIADQARAGNTLKSGT
EEECCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
ANSPKYDEQIRFVTGLGQPIKSVKAAIIVPSSVAPKISKSNADGLHPRVVTDSEETAEVH
CCCCCHHHHEEEEHHCCCHHHHCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEE
LMWDELIVPEGSDDYEASRNK
EEEEHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA