| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461794
Identifier: 77461794
GI number: 77461794
Start: 6241361
End: 6242368
Strand: Reverse
Name: 77461794
Synonym: Pfl01_5573
Alternate gene names: NA
Gene position: 6242368-6241361 (Counterclockwise)
Preceding gene: 77461795
Following gene: 77461793
Centisome position: 96.96
GC content: 46.23
Gene sequence:
>1008_bases ATGAGCGCACCCGTTGCTACATTCAAAACCAATAACCAAAGCTGCTCCGTTCAAGACATCACGTTGAAATGCGACAAGCT ATGGACGATGGGGCAGCAAGAGGCTATCAGCCGACTGAGTGTCTCAGAAAAGAGCTGGTTTTCTTCGTCGAGCAAAATGG TATTGGTGGGTGACTTCAGCGCGCGAGCCGCGCGCATTGCAGCAGCCTATGCTGAGTTTTATCTAGAGCGTGGTGAGGAC GGCAAACCTGACTTGAAGGGACGCTTTTACTGGATGGGATTGGCAGCTTTCGCGAGCAAGCAAGTCATGTGTGGTCTCGA TTACATTCCTTCGGAACCGTACCTGACAGGCATAGTGCCGTTGCCATTTCAGATCCCCTACAAAATAGGCAAAAATGGCC TCGGCATGGGCAACTTTTGGCTGTTTCAGGATATTTTTGTCTGGCATTGGTTCTATAAAAAATATCCGGAGCAATTTAAT GACTGTGCCCCGAAGCGAAACGCGAAGAGCTGCGATGCGCAAGTTCAGATGAATATCGATGAGTTGCCTTGGGCGGATAA AGCACTACCTGTTCTGAAAAATCTGGGACTGACTCCTGACATCACTGCAGGCTTCAACCTCATAAAAAAATCCGAGACGA CATCTGATCCGGTTGCGAAACGAAATATTCAACAGCAATCACTATTGGCAATTGCTGATCATGAACAAAGAAGAATTCTT CAACCGCTTATCTATAACGGCTTTTTGTTTCAGAAAGTTCTGCAGACACAAGCTGCCGCTGAGGGTGCGCCGTTTGTACC GTTGCGGGTTGCTTCTTTCAGTTCTGCCTGTGATGTAAACAATAAGGAGTTGCGGGTTCAGATGACTAAAGGGGACTTGT TTAACGAATCTGATCGAATGGAGTTTATTCTGGAAATTGCAAAGCAATACCATAAAATGATGGGGCAAAAGAAAGATTAT ATGGAGCAGCAAATAGAGACGATTTCTACCTGGAAAAGCCGAAAATGA
Upstream 100 bases:
>100_bases GTGTGGTGACTGACAGCGAGGAAACCGCTGAGGTCCATCTGATGTGGGACGAACTCATCGTGCCGGAAGGCTCCGACGAT TACGAAGCGAGTAGAAATAA
Downstream 100 bases:
>100_bases AATTTTACGGGTTGTTGATTTTTTTATTGCTCGCTGCATGCGGTGACTCAGACAAAGTAGGGACTGTTTCCATGGCAAAC AAAACCCAGTTAATCAGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSAPVATFKTNNQSCSVQDITLKCDKLWTMGQQEAISRLSVSEKSWFSSSSKMVLVGDFSARAARIAAAYAEFYLERGED GKPDLKGRFYWMGLAAFASKQVMCGLDYIPSEPYLTGIVPLPFQIPYKIGKNGLGMGNFWLFQDIFVWHWFYKKYPEQFN DCAPKRNAKSCDAQVQMNIDELPWADKALPVLKNLGLTPDITAGFNLIKKSETTSDPVAKRNIQQQSLLAIADHEQRRIL QPLIYNGFLFQKVLQTQAAAEGAPFVPLRVASFSSACDVNNKELRVQMTKGDLFNESDRMEFILEIAKQYHKMMGQKKDY MEQQIETISTWKSRK
Sequences:
>Translated_335_residues MSAPVATFKTNNQSCSVQDITLKCDKLWTMGQQEAISRLSVSEKSWFSSSSKMVLVGDFSARAARIAAAYAEFYLERGED GKPDLKGRFYWMGLAAFASKQVMCGLDYIPSEPYLTGIVPLPFQIPYKIGKNGLGMGNFWLFQDIFVWHWFYKKYPEQFN DCAPKRNAKSCDAQVQMNIDELPWADKALPVLKNLGLTPDITAGFNLIKKSETTSDPVAKRNIQQQSLLAIADHEQRRIL QPLIYNGFLFQKVLQTQAAAEGAPFVPLRVASFSSACDVNNKELRVQMTKGDLFNESDRMEFILEIAKQYHKMMGQKKDY MEQQIETISTWKSRK >Mature_334_residues SAPVATFKTNNQSCSVQDITLKCDKLWTMGQQEAISRLSVSEKSWFSSSSKMVLVGDFSARAARIAAAYAEFYLERGEDG KPDLKGRFYWMGLAAFASKQVMCGLDYIPSEPYLTGIVPLPFQIPYKIGKNGLGMGNFWLFQDIFVWHWFYKKYPEQFND CAPKRNAKSCDAQVQMNIDELPWADKALPVLKNLGLTPDITAGFNLIKKSETTSDPVAKRNIQQQSLLAIADHEQRRILQ PLIYNGFLFQKVLQTQAAAEGAPFVPLRVASFSSACDVNNKELRVQMTKGDLFNESDRMEFILEIAKQYHKMMGQKKDYM EQQIETISTWKSRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38085; Mature: 37954
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPVATFKTNNQSCSVQDITLKCDKLWTMGQQEAISRLSVSEKSWFSSSSKMVLVGDFS CCCCCEEEECCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHCCHHHHHCCCCCEEEEECCC ARAARIAAAYAEFYLERGEDGKPDLKGRFYWMGLAAFASKQVMCGLDYIPSEPYLTGIVP HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCHHEECCCCCCCCCCEEEEEC LPFQIPYKIGKNGLGMGNFWLFQDIFVWHWFYKKYPEQFNDCAPKRNAKSCDAQVQMNID CCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEECHH ELPWADKALPVLKNLGLTPDITAGFNLIKKSETTSDPVAKRNIQQQSLLAIADHEQRRIL HCCCCCHHHHHHHHCCCCCCCHHCHHHHCCCCCCCCCHHHHCCCHHHHHHHHCHHHHHHH QPLIYNGFLFQKVLQTQAAAEGAPFVPLRVASFSSACDVNNKELRVQMTKGDLFNESDRM HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHH EFILEIAKQYHKMMGQKKDYMEQQIETISTWKSRK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SAPVATFKTNNQSCSVQDITLKCDKLWTMGQQEAISRLSVSEKSWFSSSSKMVLVGDFS CCCCEEEECCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHCCHHHHHCCCCCEEEEECCC ARAARIAAAYAEFYLERGEDGKPDLKGRFYWMGLAAFASKQVMCGLDYIPSEPYLTGIVP HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCHHEECCCCCCCCCCEEEEEC LPFQIPYKIGKNGLGMGNFWLFQDIFVWHWFYKKYPEQFNDCAPKRNAKSCDAQVQMNID CCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEECHH ELPWADKALPVLKNLGLTPDITAGFNLIKKSETTSDPVAKRNIQQQSLLAIADHEQRRIL HCCCCCHHHHHHHHCCCCCCCHHCHHHHCCCCCCCCCHHHHCCCHHHHHHHHCHHHHHHH QPLIYNGFLFQKVLQTQAAAEGAPFVPLRVASFSSACDVNNKELRVQMTKGDLFNESDRM HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHH EFILEIAKQYHKMMGQKKDYMEQQIETISTWKSRK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA