| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461787
Identifier: 77461787
GI number: 77461787
Start: 6234121
End: 6234939
Strand: Reverse
Name: 77461787
Synonym: Pfl01_5566
Alternate gene names: NA
Gene position: 6234939-6234121 (Counterclockwise)
Preceding gene: 77461788
Following gene: 77461786
Centisome position: 96.84
GC content: 53.11
Gene sequence:
>819_bases ATGAGCCTGTTCGTTTCTGCCTATGCCTTGGCTGAGAACATTCAGATCGTCGGGGTTGGCGGGCACATGTTGACGCTGAA GGATAAGAAATGGAGCAGGCCTGCTGCGGAGTTGGCGATCGCCTCGTTTACCGCGAATGGCAAGACTTTCCCACTCTATG TTTCCGACGTTGGTACCGAAACGCATGACAGTTGGCTAAGCCCTGACAAAAAAACAGTGCTGCTTCTTCAGACTCTGTAT GGCGTTGTCATTGGTCAAGAGGCTGAAGAAATTCCAACAGAGGAGACTGGTTGCGGTGTCGTTTCGATGGAGACCGGTTG CGTACTGAGTCAGCACGCAGCCACGTTTTGCTACGGCAAGTGGGAGGGCAATCGATGGACCTCCGGTGAAGGGGAAGTTC TTGACCTTGCCTTGACGACACCGTCTCCAAAGGATTTGTTGAATCGAGTCGCAAGTATTGAGGTGCCGCAATCTCGCGTG GAAGAACTCGAATTCAATCTTCGCACTATAAGTCCAGACGCCTATATGGCTTGTCACCCACCGGCGCGCAATGTTCAAGC TCTCAACGACCTGGCCTTCTACCTGGCCGAGGGCGGTAACGATGAACTTGCATTGAAGTTTTATCGAGGCGTTGAGGCCG TCGGCAAACGCACGGTACTGATGTTGAACATCGCCGACTCACTCTGGCGCCTTGATCGCAAAGACGAAGCGCAGCGCTAT TACAGCGAGTACCGCGACGCGATGAGCGCGGACGGTAAGGCGCAGAAAATACCTCAACGTGCAGTTGAGCGATCCGTTAT TCAGGGAATGAAACATTGA
Upstream 100 bases:
>100_bases CTGATCAAGGCTTACGGCGTGACGAAGAGGCAGTTGCAGTCGGAAAGTCCGTCAGTGAAAAGGATCGACTATGGGCAGCC TTAAATGGGTGATGATAGTC
Downstream 100 bases:
>100_bases ACATGTTTGTGCGCTGTATCGCGTTGTCCTTAGGCCTGCTGTCCGCTTCAGCCGTGCTCGCTGAGGACACTTGCAAAGTC ATCACCGTGAGCTGGCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSLFVSAYALAENIQIVGVGGHMLTLKDKKWSRPAAELAIASFTANGKTFPLYVSDVGTETHDSWLSPDKKTVLLLQTLY GVVIGQEAEEIPTEETGCGVVSMETGCVLSQHAATFCYGKWEGNRWTSGEGEVLDLALTTPSPKDLLNRVASIEVPQSRV EELEFNLRTISPDAYMACHPPARNVQALNDLAFYLAEGGNDELALKFYRGVEAVGKRTVLMLNIADSLWRLDRKDEAQRY YSEYRDAMSADGKAQKIPQRAVERSVIQGMKH
Sequences:
>Translated_272_residues MSLFVSAYALAENIQIVGVGGHMLTLKDKKWSRPAAELAIASFTANGKTFPLYVSDVGTETHDSWLSPDKKTVLLLQTLY GVVIGQEAEEIPTEETGCGVVSMETGCVLSQHAATFCYGKWEGNRWTSGEGEVLDLALTTPSPKDLLNRVASIEVPQSRV EELEFNLRTISPDAYMACHPPARNVQALNDLAFYLAEGGNDELALKFYRGVEAVGKRTVLMLNIADSLWRLDRKDEAQRY YSEYRDAMSADGKAQKIPQRAVERSVIQGMKH >Mature_271_residues SLFVSAYALAENIQIVGVGGHMLTLKDKKWSRPAAELAIASFTANGKTFPLYVSDVGTETHDSWLSPDKKTVLLLQTLYG VVIGQEAEEIPTEETGCGVVSMETGCVLSQHAATFCYGKWEGNRWTSGEGEVLDLALTTPSPKDLLNRVASIEVPQSRVE ELEFNLRTISPDAYMACHPPARNVQALNDLAFYLAEGGNDELALKFYRGVEAVGKRTVLMLNIADSLWRLDRKDEAQRYY SEYRDAMSADGKAQKIPQRAVERSVIQGMKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30064; Mature: 29933
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFVSAYALAENIQIVGVGGHMLTLKDKKWSRPAAELAIASFTANGKTFPLYVSDVGTE CCEEEEEHHHHCCEEEEEECCEEEEEECCCCCCCHHHHEEEEEECCCCEEEEEEECCCCC THDSWLSPDKKTVLLLQTLYGVVIGQEAEEIPTEETGCGVVSMETGCVLSQHAATFCYGK CCHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCCEEHHCCCEEEEEE WEGNRWTSGEGEVLDLALTTPSPKDLLNRVASIEVPQSRVEELEFNLRTISPDAYMACHP ECCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHCEEEEECCCCEEEECC PARNVQALNDLAFYLAEGGNDELALKFYRGVEAVGKRTVLMLNIADSLWRLDRKDEAQRY CCCCHHHHHHHHHHEECCCCCCEEEHHHHHHHHHCCEEEEEEEECHHHHHCCCHHHHHHH YSEYRDAMSADGKAQKIPQRAVERSVIQGMKH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLFVSAYALAENIQIVGVGGHMLTLKDKKWSRPAAELAIASFTANGKTFPLYVSDVGTE CEEEEEHHHHCCEEEEEECCEEEEEECCCCCCCHHHHEEEEEECCCCEEEEEEECCCCC THDSWLSPDKKTVLLLQTLYGVVIGQEAEEIPTEETGCGVVSMETGCVLSQHAATFCYGK CCHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCCEEHHCCCEEEEEE WEGNRWTSGEGEVLDLALTTPSPKDLLNRVASIEVPQSRVEELEFNLRTISPDAYMACHP ECCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHCEEEEECCCCEEEECC PARNVQALNDLAFYLAEGGNDELALKFYRGVEAVGKRTVLMLNIADSLWRLDRKDEAQRY CCCCHHHHHHHHHHEECCCCCCEEEHHHHHHHHHCCEEEEEEEECHHHHHCCCHHHHHHH YSEYRDAMSADGKAQKIPQRAVERSVIQGMKH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA