| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461786
Identifier: 77461786
GI number: 77461786
Start: 6233363
End: 6234118
Strand: Reverse
Name: 77461786
Synonym: Pfl01_5565
Alternate gene names: NA
Gene position: 6234118-6233363 (Counterclockwise)
Preceding gene: 77461787
Following gene: 77461785
Centisome position: 96.83
GC content: 53.84
Gene sequence:
>756_bases ATGTTTGTGCGCTGTATCGCGTTGTCCTTAGGCCTGCTGTCCGCTTCAGCCGTGCTCGCTGAGGACACTTGCAAAGTCAT CACCGTGAGCTGGCAGTACGATGAGTGTGTGGAAGCCGACCGCAAGAGTGCCGACGCAAAACTCAATTCCAGCTACAAAA AACTGATGGCGCGATTTGAATCTCGATGGAAGCCTGAGCCTGAACAAGGAAAGGCTTACATGGCTATGGCAAAAGACTCG CAGCGCGCCTGGATCAAGTTGCGCGATACCACTTGCCCCCTCGATGCCACGGATGTCGAACCTGGTTCGCAGGCATATAC CTTGGTGCTCAATAAGTGCATCGCCAGAATGAGTCTAGAGCGTGCAGCCTTCCTGGATGCGGTCGTTCCGGATGGTCCGA GTGAAGTGGTCGATGTCGCCAAGGTTTCCAGTTCTGCTTCGCAACGATACGGCGATGTGGTGGCTCGTTATGTCACTACG TTTGGTAGCCCCTGCCTCAATGTTCAGACCCTCGCGCCCGAGGGCAATTGGCGGGTGCTCTCCTCAAAACGGTTTTGCAG TTTTAACGGCAAATCGTTTTGGGATGGTTACGCCAGTGCCTTGTTTGAGGATCATGCATTCACTTCGGATGGTTTACAGC TGACGCTCAGCTTGTTCGAGCTTCGTGAGGAGGCAGAGAAGCGCCTCGCCTGTGTAATTCCGATTCAAAACGAGCGAATC AAAGAGCTGAAATGCGGCGCACCTGAGTCATCGTGA
Upstream 100 bases:
>100_bases ACAGCGAGTACCGCGACGCGATGAGCGCGGACGGTAAGGCGCAGAAAATACCTCAACGTGCAGTTGAGCGATCCGTTATT CAGGGAATGAAACATTGAAC
Downstream 100 bases:
>100_bases AACCATCAGCGTAAATATTTAGAAGATTGATCAGCAGGGAAGTGATCGGAATTGAACAGGCTCTTAAGTTGTTTTGGTGT GCTCGGGCTTATCGTCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MFVRCIALSLGLLSASAVLAEDTCKVITVSWQYDECVEADRKSADAKLNSSYKKLMARFESRWKPEPEQGKAYMAMAKDS QRAWIKLRDTTCPLDATDVEPGSQAYTLVLNKCIARMSLERAAFLDAVVPDGPSEVVDVAKVSSSASQRYGDVVARYVTT FGSPCLNVQTLAPEGNWRVLSSKRFCSFNGKSFWDGYASALFEDHAFTSDGLQLTLSLFELREEAEKRLACVIPIQNERI KELKCGAPESS
Sequences:
>Translated_251_residues MFVRCIALSLGLLSASAVLAEDTCKVITVSWQYDECVEADRKSADAKLNSSYKKLMARFESRWKPEPEQGKAYMAMAKDS QRAWIKLRDTTCPLDATDVEPGSQAYTLVLNKCIARMSLERAAFLDAVVPDGPSEVVDVAKVSSSASQRYGDVVARYVTT FGSPCLNVQTLAPEGNWRVLSSKRFCSFNGKSFWDGYASALFEDHAFTSDGLQLTLSLFELREEAEKRLACVIPIQNERI KELKCGAPESS >Mature_251_residues MFVRCIALSLGLLSASAVLAEDTCKVITVSWQYDECVEADRKSADAKLNSSYKKLMARFESRWKPEPEQGKAYMAMAKDS QRAWIKLRDTTCPLDATDVEPGSQAYTLVLNKCIARMSLERAAFLDAVVPDGPSEVVDVAKVSSSASQRYGDVVARYVTT FGSPCLNVQTLAPEGNWRVLSSKRFCSFNGKSFWDGYASALFEDHAFTSDGLQLTLSLFELREEAEKRLACVIPIQNERI KELKCGAPESS
Specific function: Unknown
COG id: COG3755
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27795; Mature: 27795
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVRCIALSLGLLSASAVLAEDTCKVITVSWQYDECVEADRKSADAKLNSSYKKLMARFE CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHH SRWKPEPEQGKAYMAMAKDSQRAWIKLRDTTCPLDATDVEPGSQAYTLVLNKCIARMSLE HHCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RAAFLDAVVPDGPSEVVDVAKVSSSASQRYGDVVARYVTTFGSPCLNVQTLAPEGNWRVL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEE SSKRFCSFNGKSFWDGYASALFEDHAFTSDGLQLTLSLFELREEAEKRLACVIPIQNERI CCCCEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCHH KELKCGAPESS HHHCCCCCCCC >Mature Secondary Structure MFVRCIALSLGLLSASAVLAEDTCKVITVSWQYDECVEADRKSADAKLNSSYKKLMARFE CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHH SRWKPEPEQGKAYMAMAKDSQRAWIKLRDTTCPLDATDVEPGSQAYTLVLNKCIARMSLE HHCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RAAFLDAVVPDGPSEVVDVAKVSSSASQRYGDVVARYVTTFGSPCLNVQTLAPEGNWRVL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEE SSKRFCSFNGKSFWDGYASALFEDHAFTSDGLQLTLSLFELREEAEKRLACVIPIQNERI CCCCEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCHH KELKCGAPESS HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA