| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yfkF [H]
Identifier: 77461754
GI number: 77461754
Start: 6202415
End: 6203560
Strand: Reverse
Name: yfkF [H]
Synonym: Pfl01_5533
Alternate gene names: 77461754
Gene position: 6203560-6202415 (Counterclockwise)
Preceding gene: 77461755
Following gene: 77461751
Centisome position: 96.35
GC content: 63.96
Gene sequence:
>1146_bases ATGCGTTGGGCGACGTATTTCGCCGTGTTGGCGTCTGTCTTGAGTGTTGGCCTGGCCCTTGGGGTCAGCATGCCGCTGGT GTCGTTGCGCCTGGAGAGCTGGGGCTACGGCTCGTTCGCCATTGGCGTGATGGCGGCGATGCCGGCCATTGGCGTGTTGC TGGGGGCGAAGATCTCCAGTCATCTGGCCGCGCGTTTCGGTACGGCGAACCTGATGCGCCTGTGCCTGTGGGCTGGGGCG CTGTCCATCGGCCTGCTGGCGCTGCTGCCGAGCTACCCGATCTGGCTGGTATTGCGGCTGATGATCGGCGTGGTTCTGAC CATCGTGTTCATCCTCGGCGAGAGCTGGATCAATCAACTGGTGGTCGAGCACTGGCGCGGGCGACTGGTGGCACTGTATG GCAGCAGTTATGCGTTGAGCCAACTGTCTGGTCCATTACTGCTGGGTGCGCTTGGCACCGATCACGATTACGGTTTCTGG GTGGGTGTCGGTCTGCTGATCGCTTCGCCGTTTCTGCTGCTGGGCCGCAGTGGCGCGCCAAGCAGCGAGGCCAGCAGCGT GACCTTCGGCGATCTGTGGGGCTTCGCTCGCGAACTGCCGGCCATCGCCTGGGCGGTGTCTTTGTTCGCCGCATTCGAAG CAATGATCCTGACCCTGTTGCCGGTGTATTGCCTGCAACAGGGGTTCACTGCGGAGATTGCGCTGGCGATGGTCAGCACC GTGGTGGTGGGCGATGCGCTGCTGCAATTGCCCATCGGTGCGCTGGCCGATTATCTGTCACGGCGAACCCTGTTTACCGG TTGCGCCGTGGTATTGATGTTGTCGAGCCTGGCGATCCCGATGCTGCTCGACACCTTGCTGATCTGGCCGCTGTGGGTGC TGTTCGGCGCCAGTGCCGGTGGTCTGTTCACGCTTTCGCTGATTCTGATCGGCGAGCGCTACCGCGACGATGCGCTGGTG CGCGCCAACGCGCATGTCGCGCAGCTGTGGGGCGTCGGTTGTCTGATCGGGCCGTTGATGGCGGGGGCTGGCAGTCAGTG GATCAGCGGGCATGCATTGCCGTGGCTGATGGCGGCCGGGGCGTTCGGGCTGGTGATACTGCTGTCGCGGCAAGGGGCGT TCGGCAAGGTGCCGGAGCCCGCTTGA
Upstream 100 bases:
>100_bases CAGTCAGCACATTTGCTGAATGTGAAACCGTTATCGCGAGCAAGCTCGCTCCCACAGTCTTTTGTGGTGCACATAAAAAT TATCCACAGGAGCGTGGACC
Downstream 100 bases:
>100_bases TAAGCCGGCTGGAGCGGGTTGCTACAGCATCCGCTCCAGTCCCACCGTAGTGCTGAACCACGCATTGAAGCGCCGCCACC AGTTGCCGGGCTCCTTGGTC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MRWATYFAVLASVLSVGLALGVSMPLVSLRLESWGYGSFAIGVMAAMPAIGVLLGAKISSHLAARFGTANLMRLCLWAGA LSIGLLALLPSYPIWLVLRLMIGVVLTIVFILGESWINQLVVEHWRGRLVALYGSSYALSQLSGPLLLGALGTDHDYGFW VGVGLLIASPFLLLGRSGAPSSEASSVTFGDLWGFARELPAIAWAVSLFAAFEAMILTLLPVYCLQQGFTAEIALAMVST VVVGDALLQLPIGALADYLSRRTLFTGCAVVLMLSSLAIPMLLDTLLIWPLWVLFGASAGGLFTLSLILIGERYRDDALV RANAHVAQLWGVGCLIGPLMAGAGSQWISGHALPWLMAAGAFGLVILLSRQGAFGKVPEPA
Sequences:
>Translated_381_residues MRWATYFAVLASVLSVGLALGVSMPLVSLRLESWGYGSFAIGVMAAMPAIGVLLGAKISSHLAARFGTANLMRLCLWAGA LSIGLLALLPSYPIWLVLRLMIGVVLTIVFILGESWINQLVVEHWRGRLVALYGSSYALSQLSGPLLLGALGTDHDYGFW VGVGLLIASPFLLLGRSGAPSSEASSVTFGDLWGFARELPAIAWAVSLFAAFEAMILTLLPVYCLQQGFTAEIALAMVST VVVGDALLQLPIGALADYLSRRTLFTGCAVVLMLSSLAIPMLLDTLLIWPLWVLFGASAGGLFTLSLILIGERYRDDALV RANAHVAQLWGVGCLIGPLMAGAGSQWISGHALPWLMAAGAFGLVILLSRQGAFGKVPEPA >Mature_381_residues MRWATYFAVLASVLSVGLALGVSMPLVSLRLESWGYGSFAIGVMAAMPAIGVLLGAKISSHLAARFGTANLMRLCLWAGA LSIGLLALLPSYPIWLVLRLMIGVVLTIVFILGESWINQLVVEHWRGRLVALYGSSYALSQLSGPLLLGALGTDHDYGFW VGVGLLIASPFLLLGRSGAPSSEASSVTFGDLWGFARELPAIAWAVSLFAAFEAMILTLLPVYCLQQGFTAEIALAMVST VVVGDALLQLPIGALADYLSRRTLFTGCAVVLMLSSLAIPMLLDTLLIWPLWVLFGASAGGLFTLSLILIGERYRDDALV RANAHVAQLWGVGCLIGPLMAGAGSQWISGHALPWLMAAGAFGLVILLSRQGAFGKVPEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40298; Mature: 40298
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWATYFAVLASVLSVGLALGVSMPLVSLRLESWGYGSFAIGVMAAMPAIGVLLGAKISS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH HLAARFGTANLMRLCLWAGALSIGLLALLPSYPIWLVLRLMIGVVLTIVFILGESWINQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVEHWRGRLVALYGSSYALSQLSGPLLLGALGTDHDYGFWVGVGLLIASPFLLLGRSGAP HHHHHCCCEEEEECCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCCC SSEASSVTFGDLWGFARELPAIAWAVSLFAAFEAMILTLLPVYCLQQGFTAEIALAMVST CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VVVGDALLQLPIGALADYLSRRTLFTGCAVVLMLSSLAIPMLLDTLLIWPLWVLFGASAG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLFTLSLILIGERYRDDALVRANAHVAQLWGVGCLIGPLMAGAGSQWISGHALPWLMAAG HHHHHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AFGLVILLSRQGAFGKVPEPA HHHHHHHEECCCCCCCCCCCC >Mature Secondary Structure MRWATYFAVLASVLSVGLALGVSMPLVSLRLESWGYGSFAIGVMAAMPAIGVLLGAKISS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH HLAARFGTANLMRLCLWAGALSIGLLALLPSYPIWLVLRLMIGVVLTIVFILGESWINQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVEHWRGRLVALYGSSYALSQLSGPLLLGALGTDHDYGFWVGVGLLIASPFLLLGRSGAP HHHHHCCCEEEEECCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCCC SSEASSVTFGDLWGFARELPAIAWAVSLFAAFEAMILTLLPVYCLQQGFTAEIALAMVST CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VVVGDALLQLPIGALADYLSRRTLFTGCAVVLMLSSLAIPMLLDTLLIWPLWVLFGASAG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLFTLSLILIGERYRDDALVRANAHVAQLWGVGCLIGPLMAGAGSQWISGHALPWLMAAG HHHHHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AFGLVILLSRQGAFGKVPEPA HHHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]