| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fcuA [H]
Identifier: 77460020
GI number: 77460020
Start: 4299449
End: 4301878
Strand: Direct
Name: fcuA [H]
Synonym: Pfl01_3798
Alternate gene names: 77460020
Gene position: 4299449-4301878 (Clockwise)
Preceding gene: 77460019
Following gene: 77460021
Centisome position: 66.78
GC content: 65.43
Gene sequence:
>2430_bases ATGACCGCAATGCCATCGCCCCGCCACGCCACGTTTGCGCTCAAGGCCCTGAACCTGAGCCTGGCCCTGGCCTTCAGCGC ACTGCTGCCGAGCGCCGCCCAAGCCGCCGACAGCGTCAGTGAAAGCGCCAGCCGCAGCGTCAACATCGGCCCCGGCCTGC TCAGCCATGTGCTGGCGCAATTTGCGGTCAGCGTCGGCGTGCCGCTGTCGTTCGATCCGGCGCAATTGGGCAATCGCCAG AGCCCCGGCCTGCAAGGCAGTTACACCGCGCAGAGCGGTTTTGCCCGGTTGCTGGAAGGCAGCGGTTTCGAGCTGATCAG CACCGGGCACAACGGTTACACCGTGGCGCCGAAAGTTGCGGCGGACAGCGCGCTGGAACTGGGCGCCACCAACGTCAGCG CCCTGCGTGACGACAGTGGTGACACCTACGGCGGCGAACAGGTCGCCCGCCGCGCGCAGATCGGCATGCTCGGCAACCAG GAGGTCAACGACCTGCCCTTCAGCGTCACCAGTTACACCGCCAAGACCATGGCCGACCAACAGGCCCAGACCGTCGGCGA TGTGTTGCTCAACGACGCCTCGGTGCGCCAGTCCAACGGCTTCGGCAACTTCTCGCAGATGTTCATGATCCGCGGCCTGC CGCTGGCCTCCGATGACATTTCCTATAACGGCCTCTATGGCGTGCTGCCCCGGCAGATCATTGCCGTCGAAGCGCTGGAC CGGGTCGAACTGTTCAAGGGCCCGAATGCATTCGTCAACGGCGTGACCCCGAGCGGCAGCGGCATCGGTGGCGGGATCAA CCTGCAACCCAAACGCGCCATGGACACGCCGACCCGCAGCGTCACCCTCGACTACAGCGCCGACGGTCGGGTCGGCGGCC ATCTGGATCTGGGCCAGCGCTTTGGCGAGGACAACCGCTTCGGCGCGCGGGTCAACCTGATGCAGCGCGAAGGCGATACT GCCGTCGATGACGAAGACCAGCGCTCGTCGCTGTTCAGCCTCGGCCTGGACTATCGTGGCGATCGCCTGCGAGTCTCGAC CGATTTCGGCTATCAGAAGCAGGTCATCAACCAGGGCCGCTCGGTGGTCTATGTCGATTCGAGCTTGGCAAAAGCGCCCA AGGTGCCGCACGCCAACGCCAGCTACGCCCAGAGCTGGAGCTACTCGCAACTCGAAGACACCTTCGGCATGGCCCGCGCC GAGTACGACCTCAACGACAACTGGACCGCCTACTTGTCCGGCGGCGCCAAGCACACCCGCGAGAACGGGGTTTACTCGTC GCTGACCGTCACCGACCTCAACGGCAACGCCCGTGGCGGCATGCTCTATTCGCCCCACGACGAGGACAACCAGAGCGCCA TGGCCGGGCTCAACGGCCGCTTCGACACCGGCCCCGTCACGCACCAGTTGAACCTCGGCTGGGCGGGCATCTGGGGCGAG CAGCGCTCGGCGTTCGAAACCATCGGCACCGCCGGGCGCTACAGCACCAACCTGTACAACGTCACCGACAAACCGCGCCC GGCGCCCACCTCGTTCGCCAGCGACATCAGCGACCCGCGCATCACCGGCAAGAACACCCTGCGCAGCGAGGCGATTTCCG ACACCCTCGGCTTCGTCGATGACCGCATTCTGCTGACCCTCGGCGTGCGCCGTCAGGCACTGAAAGTCGACGGCTGGAGC ACCGCCAGCGGCGCCCGTACCTCAAGTTACGAAGAGTCGATCACCACCCCGGTCTACGGCCTGGTGATCAAGCCGTGGGA ACACGTGTCGTTCTACGCCAACCGCATCGAAGGCCTGGCCAAAGGCCCGACGCCGCCGACCACCGCGATCAACCGCGACG AAACCTTCGCCCCGGTGCGCAGCAAGCAGATCGAGGCCGGCGTGCGCCTGGACATGGGCAGCTACGGCGCCAACCTCGGC GTCTATCGCATCGAACAACCGTCGAGCTACACCCAGGACGGAATCTTCCGGGTCGACGGTCAGCAGACCAACAAAGGCGT GGAACTCAACGTGTACGGCGAACCGCTCGACGGCCTGCGCCTGCTCAGCGGCGCAACCGTGATGAAGACTGAACTGGAAG GCAGCAGCAACGGCGCAAATGACGGCAACCGCGCCGTCGGGGTGCCGCGCTTCCAGTTCAACCTCGGCGCCGACTGGGAC ATTCCGGGCCTCGAAGGCGCCGCCCTCAGCGCGCGGATGTTGCGTACCGGCGGCCAGTACCTGAATGCGGCGAATACTCA AAGCATTCCAGCGTGGAACCGCTTCGACCTCGGCTCGCGCTACGCCTTCAAACTGGATGAAAAACAGATCACGCTGCGGG CCAATCTGGAGAACGTCGCCAACGAAGCCTATTGGGCCTCGGCCAACGGCGGTTACCTGACCCAGGGCACGCCGCGCACG CTGAAGGTGTCGGCGACCGTGGACTTCTGA
Upstream 100 bases:
>100_bases AGCCCTCGGACAATATTTTCAATATTCCCTGATACCTTTTCGCGACTCGTCCGGTGAGTGGATAGACCTTCCGATTCCAC GCCCCCGACAGGAACACCGA
Downstream 100 bases:
>100_bases CCGCTCGTCATCCGGCCGGCACCAAGGGTTCGGCGCGTCTGACCAATATCAGGTAAATCCCCTTTCCGGAGACAGACCAT GGTGACGCGCAAACTCACCT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MTAMPSPRHATFALKALNLSLALAFSALLPSAAQAADSVSESASRSVNIGPGLLSHVLAQFAVSVGVPLSFDPAQLGNRQ SPGLQGSYTAQSGFARLLEGSGFELISTGHNGYTVAPKVAADSALELGATNVSALRDDSGDTYGGEQVARRAQIGMLGNQ EVNDLPFSVTSYTAKTMADQQAQTVGDVLLNDASVRQSNGFGNFSQMFMIRGLPLASDDISYNGLYGVLPRQIIAVEALD RVELFKGPNAFVNGVTPSGSGIGGGINLQPKRAMDTPTRSVTLDYSADGRVGGHLDLGQRFGEDNRFGARVNLMQREGDT AVDDEDQRSSLFSLGLDYRGDRLRVSTDFGYQKQVINQGRSVVYVDSSLAKAPKVPHANASYAQSWSYSQLEDTFGMARA EYDLNDNWTAYLSGGAKHTRENGVYSSLTVTDLNGNARGGMLYSPHDEDNQSAMAGLNGRFDTGPVTHQLNLGWAGIWGE QRSAFETIGTAGRYSTNLYNVTDKPRPAPTSFASDISDPRITGKNTLRSEAISDTLGFVDDRILLTLGVRRQALKVDGWS TASGARTSSYEESITTPVYGLVIKPWEHVSFYANRIEGLAKGPTPPTTAINRDETFAPVRSKQIEAGVRLDMGSYGANLG VYRIEQPSSYTQDGIFRVDGQQTNKGVELNVYGEPLDGLRLLSGATVMKTELEGSSNGANDGNRAVGVPRFQFNLGADWD IPGLEGAALSARMLRTGGQYLNAANTQSIPAWNRFDLGSRYAFKLDEKQITLRANLENVANEAYWASANGGYLTQGTPRT LKVSATVDF
Sequences:
>Translated_809_residues MTAMPSPRHATFALKALNLSLALAFSALLPSAAQAADSVSESASRSVNIGPGLLSHVLAQFAVSVGVPLSFDPAQLGNRQ SPGLQGSYTAQSGFARLLEGSGFELISTGHNGYTVAPKVAADSALELGATNVSALRDDSGDTYGGEQVARRAQIGMLGNQ EVNDLPFSVTSYTAKTMADQQAQTVGDVLLNDASVRQSNGFGNFSQMFMIRGLPLASDDISYNGLYGVLPRQIIAVEALD RVELFKGPNAFVNGVTPSGSGIGGGINLQPKRAMDTPTRSVTLDYSADGRVGGHLDLGQRFGEDNRFGARVNLMQREGDT AVDDEDQRSSLFSLGLDYRGDRLRVSTDFGYQKQVINQGRSVVYVDSSLAKAPKVPHANASYAQSWSYSQLEDTFGMARA EYDLNDNWTAYLSGGAKHTRENGVYSSLTVTDLNGNARGGMLYSPHDEDNQSAMAGLNGRFDTGPVTHQLNLGWAGIWGE QRSAFETIGTAGRYSTNLYNVTDKPRPAPTSFASDISDPRITGKNTLRSEAISDTLGFVDDRILLTLGVRRQALKVDGWS TASGARTSSYEESITTPVYGLVIKPWEHVSFYANRIEGLAKGPTPPTTAINRDETFAPVRSKQIEAGVRLDMGSYGANLG VYRIEQPSSYTQDGIFRVDGQQTNKGVELNVYGEPLDGLRLLSGATVMKTELEGSSNGANDGNRAVGVPRFQFNLGADWD IPGLEGAALSARMLRTGGQYLNAANTQSIPAWNRFDLGSRYAFKLDEKQITLRANLENVANEAYWASANGGYLTQGTPRT LKVSATVDF >Mature_808_residues TAMPSPRHATFALKALNLSLALAFSALLPSAAQAADSVSESASRSVNIGPGLLSHVLAQFAVSVGVPLSFDPAQLGNRQS PGLQGSYTAQSGFARLLEGSGFELISTGHNGYTVAPKVAADSALELGATNVSALRDDSGDTYGGEQVARRAQIGMLGNQE VNDLPFSVTSYTAKTMADQQAQTVGDVLLNDASVRQSNGFGNFSQMFMIRGLPLASDDISYNGLYGVLPRQIIAVEALDR VELFKGPNAFVNGVTPSGSGIGGGINLQPKRAMDTPTRSVTLDYSADGRVGGHLDLGQRFGEDNRFGARVNLMQREGDTA VDDEDQRSSLFSLGLDYRGDRLRVSTDFGYQKQVINQGRSVVYVDSSLAKAPKVPHANASYAQSWSYSQLEDTFGMARAE YDLNDNWTAYLSGGAKHTRENGVYSSLTVTDLNGNARGGMLYSPHDEDNQSAMAGLNGRFDTGPVTHQLNLGWAGIWGEQ RSAFETIGTAGRYSTNLYNVTDKPRPAPTSFASDISDPRITGKNTLRSEAISDTLGFVDDRILLTLGVRRQALKVDGWST ASGARTSSYEESITTPVYGLVIKPWEHVSFYANRIEGLAKGPTPPTTAINRDETFAPVRSKQIEAGVRLDMGSYGANLGV YRIEQPSSYTQDGIFRVDGQQTNKGVELNVYGEPLDGLRLLSGATVMKTELEGSSNGANDGNRAVGVPRFQFNLGADWDI PGLEGAALSARMLRTGGQYLNAANTQSIPAWNRFDLGSRYAFKLDEKQITLRANLENVANEAYWASANGGYLTQGTPRTL KVSATVDF
Specific function: Receptor for the hydroxamate siderophore, ferrichrome. Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=164, Percent_Identity=32.9268292682927, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 86773; Mature: 86642
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMPSPRHATFALKALNLSLALAFSALLPSAAQAADSVSESASRSVNIGPGLLSHVLAQ CCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHH FAVSVGVPLSFDPAQLGNRQSPGLQGSYTAQSGFARLLEGSGFELISTGHNGYTVAPKVA HHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEECCCHH ADSALELGATNVSALRDDSGDTYGGEQVARRAQIGMLGNQEVNDLPFSVTSYTAKTMADQ CCCHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH QAQTVGDVLLNDASVRQSNGFGNFSQMFMIRGLPLASDDISYNGLYGVLPRQIIAVEALD HHHHHHHHHHCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHCHHHHHHHHHHH RVELFKGPNAFVNGVTPSGSGIGGGINLQPKRAMDTPTRSVTLDYSADGRVGGHLDLGQR HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHH FGEDNRFGARVNLMQREGDTAVDDEDQRSSLFSLGLDYRGDRLRVSTDFGYQKQVINQGR CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCC SVVYVDSSLAKAPKVPHANASYAQSWSYSQLEDTFGMARAEYDLNDNWTAYLSGGAKHTR EEEEECCHHHHCCCCCCCCCHHHHCCCHHHHHHHHCCEEEEECCCCCEEEEEECCCCHHH ENGVYSSLTVTDLNGNARGGMLYSPHDEDNQSAMAGLNGRFDTGPVTHQLNLGWAGIWGE CCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHCCCCCCCCCCCEEEEECCEEEECCC QRSAFETIGTAGRYSTNLYNVTDKPRPAPTSFASDISDPRITGKNTLRSEAISDTLGFVD HHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC DRILLTLGVRRQALKVDGWSTASGARTSSYEESITTPVYGLVIKPWEHVSFYANRIEGLA CEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHC KGPTPPTTAINRDETFAPVRSKQIEAGVRLDMGSYGANLGVYRIEQPSSYTQDGIFRVDG CCCCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCCCEEEECC QQTNKGVELNVYGEPLDGLRLLSGATVMKTELEGSSNGANDGNRAVGVPRFQFNLGADWD CCCCCCEEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCEECCCEEEEECCCCCC IPGLEGAALSARMLRTGGQYLNAANTQSIPAWNRFDLGSRYAFKLDEKQITLRANLENVA CCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECHHHHC NEAYWASANGGYLTQGTPRTLKVSATVDF CCCEEECCCCCEEECCCCCEEEEEEEECC >Mature Secondary Structure TAMPSPRHATFALKALNLSLALAFSALLPSAAQAADSVSESASRSVNIGPGLLSHVLAQ CCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHH FAVSVGVPLSFDPAQLGNRQSPGLQGSYTAQSGFARLLEGSGFELISTGHNGYTVAPKVA HHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEECCCHH ADSALELGATNVSALRDDSGDTYGGEQVARRAQIGMLGNQEVNDLPFSVTSYTAKTMADQ CCCHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH QAQTVGDVLLNDASVRQSNGFGNFSQMFMIRGLPLASDDISYNGLYGVLPRQIIAVEALD HHHHHHHHHHCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHCHHHHHHHHHHH RVELFKGPNAFVNGVTPSGSGIGGGINLQPKRAMDTPTRSVTLDYSADGRVGGHLDLGQR HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHH FGEDNRFGARVNLMQREGDTAVDDEDQRSSLFSLGLDYRGDRLRVSTDFGYQKQVINQGR CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCC SVVYVDSSLAKAPKVPHANASYAQSWSYSQLEDTFGMARAEYDLNDNWTAYLSGGAKHTR EEEEECCHHHHCCCCCCCCCHHHHCCCHHHHHHHHCCEEEEECCCCCEEEEEECCCCHHH ENGVYSSLTVTDLNGNARGGMLYSPHDEDNQSAMAGLNGRFDTGPVTHQLNLGWAGIWGE CCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHCCCCCCCCCCCEEEEECCEEEECCC QRSAFETIGTAGRYSTNLYNVTDKPRPAPTSFASDISDPRITGKNTLRSEAISDTLGFVD HHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC DRILLTLGVRRQALKVDGWSTASGARTSSYEESITTPVYGLVIKPWEHVSFYANRIEGLA CEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHC KGPTPPTTAINRDETFAPVRSKQIEAGVRLDMGSYGANLGVYRIEQPSSYTQDGIFRVDG CCCCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCCCEEEECC QQTNKGVELNVYGEPLDGLRLLSGATVMKTELEGSSNGANDGNRAVGVPRFQFNLGADWD CCCCCCEEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCEECCCEEEEECCCCCC IPGLEGAALSARMLRTGGQYLNAANTQSIPAWNRFDLGSRYAFKLDEKQITLRANLENVA CCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECHHHHC NEAYWASANGGYLTQGTPRTLKVSATVDF CCCEEECCCCCEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8384682 [H]