| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460002
Identifier: 77460002
GI number: 77460002
Start: 4276471
End: 4277127
Strand: Direct
Name: 77460002
Synonym: Pfl01_3780
Alternate gene names: NA
Gene position: 4276471-4277127 (Clockwise)
Preceding gene: 77460001
Following gene: 77460004
Centisome position: 66.42
GC content: 60.88
Gene sequence:
>657_bases ATGAATCAAAAAACCACCTCCGAACCCATGGCCACGCTTTACCAGGAAGGCCGCCACACGTTTGTCGAACTCGTACCCGA TGGCGGGGCCAGGCTCGACGCCTTGTTCCATACCGTTCCCGCATTGGGCCAACTGGCCGTCGGCGTGGTGTACGGACATT TACACTCGCGGCCTGGTCTTGATCCGCGATTGCGCGAAGCGGTGTCCCTTGCCGCCATTGTCGCCTCGGGCATGGTCGGA CCTCCGCTGAGCGTGCACCTCAAAACCGGCCTGGCATCGGGCCTCGCACCGGGTGAATTGACTGAAATACTGCTGCAGGC TTCGGCCTTCGCCGGTTTCCCCCGAGCGGTCAGTGCGGCGGAGCAACTCAATCATCTGTTTGCAGACGCGGGCCTTGAAT CACCACCGCCCCCCACCCCGAGAGAAGTCACTTCGAGATTTTGCGCAGACGTTCGCGCGGGCCATCCACCGATTCCGCTG AGTGCCGCAGTGAAACGCCAGTTACGTCAGGCGGACCGTTTGGCGCTGCAAGCCTGCACAGCGCAGGCTGTAATCGTCGA GTGTTTTCAAAGCCCCGAGACGCAACCCAGAGCCCTGCTGTATGCGACGGTGGTCGATGACACTGTTGTCGCCGTAAAAC TGTTCAAGGCCCAATGA
Upstream 100 bases:
>100_bases GCGCCGCAACGGCGCCGACTGCTTCCGATGGACGCCTGTCATGCCGTAGTTCGCGCGCTGTTGCTCCGCTGCCATCCTCA TTGATCCGTGAGGACGCGAC
Downstream 100 bases:
>100_bases GCGGTTTCATGGTTATGGAACGGGTCGGTTTTATCGCAAAACGATAGCGTCGACCTGTCAGATCTGACAGGCGACAAGCG CTGCGCGCAGGCCCACAGTA
Product: carboxymuconolactone decarboxylase
Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2
Alternate protein names: 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNQKTTSEPMATLYQEGRHTFVELVPDGGARLDALFHTVPALGQLAVGVVYGHLHSRPGLDPRLREAVSLAAIVASGMVG PPLSVHLKTGLASGLAPGELTEILLQASAFAGFPRAVSAAEQLNHLFADAGLESPPPPTPREVTSRFCADVRAGHPPIPL SAAVKRQLRQADRLALQACTAQAVIVECFQSPETQPRALLYATVVDDTVVAVKLFKAQ
Sequences:
>Translated_218_residues MNQKTTSEPMATLYQEGRHTFVELVPDGGARLDALFHTVPALGQLAVGVVYGHLHSRPGLDPRLREAVSLAAIVASGMVG PPLSVHLKTGLASGLAPGELTEILLQASAFAGFPRAVSAAEQLNHLFADAGLESPPPPTPREVTSRFCADVRAGHPPIPL SAAVKRQLRQADRLALQACTAQAVIVECFQSPETQPRALLYATVVDDTVVAVKLFKAQ >Mature_218_residues MNQKTTSEPMATLYQEGRHTFVELVPDGGARLDALFHTVPALGQLAVGVVYGHLHSRPGLDPRLREAVSLAAIVASGMVG PPLSVHLKTGLASGLAPGELTEILLQASAFAGFPRAVSAAEQLNHLFADAGLESPPPPTPREVTSRFCADVRAGHPPIPL SAAVKRQLRQADRLALQACTAQAVIVECFQSPETQPRALLYATVVDDTVVAVKLFKAQ
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.44
Molecular weight: Translated: 23051; Mature: 23051
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKTTSEPMATLYQEGRHTFVELVPDGGARLDALFHTVPALGQLAVGVVYGHLHSRPGL CCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DPRLREAVSLAAIVASGMVGPPLSVHLKTGLASGLAPGELTEILLQASAFAGFPRAVSAA CHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH EQLNHLFADAGLESPPPPTPREVTSRFCADVRAGHPPIPLSAAVKRQLRQADRLALQACT HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AQAVIVECFQSPETQPRALLYATVVDDTVVAVKLFKAQ HHHHHHHHHHCCCCCCHHEEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure MNQKTTSEPMATLYQEGRHTFVELVPDGGARLDALFHTVPALGQLAVGVVYGHLHSRPGL CCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DPRLREAVSLAAIVASGMVGPPLSVHLKTGLASGLAPGELTEILLQASAFAGFPRAVSAA CHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH EQLNHLFADAGLESPPPPTPREVTSRFCADVRAGHPPIPLSAAVKRQLRQADRLALQACT HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AQAVIVECFQSPETQPRALLYATVVDDTVVAVKLFKAQ HHHHHHHHHHCCCCCCHHEEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate
Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA