| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is sstT
Identifier: 77459931
GI number: 77459931
Start: 4196252
End: 4197493
Strand: Direct
Name: sstT
Synonym: Pfl01_3709
Alternate gene names: 77459931
Gene position: 4196252-4197493 (Clockwise)
Preceding gene: 77459929
Following gene: 77459933
Centisome position: 65.18
GC content: 62.64
Gene sequence:
>1242_bases ATGCCGTTCATGACCGCTTCATCCCCTTCTCTATTGCAACGCCTCAAAAGCCTCAGCCTGGTCACCCAGATCCTTATCGG CCTGATTGCCGGCATCGCCCTCGCGCTGTTCGCGCCGGAAGCGGCCAAAGGCACGGCCTTCATCGGCAAGGTGTTCGTCT CGGCACTGAAAGCCGTGGCGCCGATCCTGGTGTTCGTGCTGGTCATGGCCTCGATCGCCAACCACAAGCACGGTCAGGAA ACCCACATCCGGCCGATTCTGTTCCTGTATCTGCTGGGCACCTTCGCCGCCGCCGTGGTCGCGGTGATTGCCAGCATGAT GTTCCCGTCGCATCTGGTGCTGTCCACCGACAACATCGCCGTAAGCGCGCCGGGCGGCATCAGTGAAGTGCTGCAAAGCC TGTTGCTGAGCGTGGTCGACAACCCGGTGAGCGCACTGATGAACGCCAACTTCATCGGCATTCTGGCCTGGGCCATCGGC ATGGGCGTGGCGATCCGGCACGCGGGCGACACTACCCGCGAAGTGCTGGGTGATCTGTCCAACGGCGTGACAGTGATTGT CCGGGTCGTGATCCGTTTTGCGCCGCTGGGTATTTTCGGCCTGGTGGCATCGACCCTGGCCACCTCCGGGTTTGGTGCAT TGATCGGTTATGCGCATCTGCTGGCAGTGCTGCTCGGCTGCATGCTGTTCGTGGCGCTGGTGATGAATCCGCTGATCGTG TTCTGGAAACTGCGTCGCAACCCTTATCCACTGACACTTCAGTGCCTGCGCGAAAGCGGCATCACCGCGTTCTTCACCCG CAGCTCGGCGGCGAACATTCCGGTCAACCTGGAATTGAGCAAGCGTCTGGGCCTGCATGAAGACACCTACTCGGTATCGA TCCCGCTCGGCGCCACCATCAACATGGCGGGTGCGGCGATCACCATCACCGTACTGAGCCTCGCGGCCGTGCACACCCTG GGCATTGCGGTGGACATCCCGACCGCGATTTTGCTCAGCGTCGTCGCGGCGATCTGTGCCTGCGGTGCTTCGGGTGTGGC CGGTGGCTCGCTGCTGCTGATTCCGCTGGCCTGCAGCCTGTTTGGCATCCCGAGCGAAATCGCCATGCAGGTGGTGGCAG TCGGCTTCATCATCGGCGTGCTGCAGGATTCGGCCGAGACGGCGCTGAACTCCTCCACCGACGTGCTGTTCACCGCCGCC GCGTGCCTGGGCGAAGAGCAGAAAGCCCAGCGTCCGGCGTAA
Upstream 100 bases:
>100_bases ACGGCGTGGTTGGCGCGTCAGTCCTTTCGGTTCGTGTCTGTGGCCTGCCCCCGATTCAACGCCCGGATTGCGCAACCTTG CACCCTATAAAAAAACAGAG
Downstream 100 bases:
>100_bases AAGCCCGGCGCAACAAAAAGCCCGCCAAGGCGCAAACCTTGGCGGGCTTTTTGTTGCAGAACGTTTTAGAACGCGCCCAT GTAATCGCGCTTGCCCACTT
Product: serine/threonine transporter SstT
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MPFMTASSPSLLQRLKSLSLVTQILIGLIAGIALALFAPEAAKGTAFIGKVFVSALKAVAPILVFVLVMASIANHKHGQE THIRPILFLYLLGTFAAAVVAVIASMMFPSHLVLSTDNIAVSAPGGISEVLQSLLLSVVDNPVSALMNANFIGILAWAIG MGVAIRHAGDTTREVLGDLSNGVTVIVRVVIRFAPLGIFGLVASTLATSGFGALIGYAHLLAVLLGCMLFVALVMNPLIV FWKLRRNPYPLTLQCLRESGITAFFTRSSAANIPVNLELSKRLGLHEDTYSVSIPLGATINMAGAAITITVLSLAAVHTL GIAVDIPTAILLSVVAAICACGASGVAGGSLLLIPLACSLFGIPSEIAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAA ACLGEEQKAQRPA
Sequences:
>Translated_413_residues MPFMTASSPSLLQRLKSLSLVTQILIGLIAGIALALFAPEAAKGTAFIGKVFVSALKAVAPILVFVLVMASIANHKHGQE THIRPILFLYLLGTFAAAVVAVIASMMFPSHLVLSTDNIAVSAPGGISEVLQSLLLSVVDNPVSALMNANFIGILAWAIG MGVAIRHAGDTTREVLGDLSNGVTVIVRVVIRFAPLGIFGLVASTLATSGFGALIGYAHLLAVLLGCMLFVALVMNPLIV FWKLRRNPYPLTLQCLRESGITAFFTRSSAANIPVNLELSKRLGLHEDTYSVSIPLGATINMAGAAITITVLSLAAVHTL GIAVDIPTAILLSVVAAICACGASGVAGGSLLLIPLACSLFGIPSEIAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAA ACLGEEQKAQRPA >Mature_412_residues PFMTASSPSLLQRLKSLSLVTQILIGLIAGIALALFAPEAAKGTAFIGKVFVSALKAVAPILVFVLVMASIANHKHGQET HIRPILFLYLLGTFAAAVVAVIASMMFPSHLVLSTDNIAVSAPGGISEVLQSLLLSVVDNPVSALMNANFIGILAWAIGM GVAIRHAGDTTREVLGDLSNGVTVIVRVVIRFAPLGIFGLVASTLATSGFGALIGYAHLLAVLLGCMLFVALVMNPLIVF WKLRRNPYPLTLQCLRESGITAFFTRSSAANIPVNLELSKRLGLHEDTYSVSIPLGATINMAGAAITITVLSLAAVHTLG IAVDIPTAILLSVVAAICACGASGVAGGSLLLIPLACSLFGIPSEIAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAA CLGEEQKAQRPA
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
COG id: COG3633
COG function: function code E; Na+/serine symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family
Homologues:
Organism=Homo sapiens, GI4827012, Length=263, Percent_Identity=26.9961977186312, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI169790839, Length=251, Percent_Identity=24.7011952191235, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI223468564, Length=254, Percent_Identity=28.3464566929134, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI223468566, Length=254, Percent_Identity=28.3464566929134, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI21314632, Length=313, Percent_Identity=25.5591054313099, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI5032093, Length=254, Percent_Identity=28.3464566929134, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI40254478, Length=259, Percent_Identity=25.8687258687259, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI66773030, Length=246, Percent_Identity=24.390243902439, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789473, Length=404, Percent_Identity=68.8118811881188, Blast_Score=541, Evalue=1e-155, Organism=Escherichia coli, GI1789947, Length=358, Percent_Identity=24.0223463687151, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1790514, Length=424, Percent_Identity=24.0566037735849, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17537407, Length=258, Percent_Identity=25.5813953488372, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71983106, Length=263, Percent_Identity=25.0950570342205, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71983099, Length=249, Percent_Identity=25.3012048192771, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193206505, Length=247, Percent_Identity=27.9352226720648, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24583025, Length=258, Percent_Identity=25.968992248062, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI17137668, Length=258, Percent_Identity=25.968992248062, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24583023, Length=258, Percent_Identity=25.968992248062, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SSTT_PSEPF (Q3K9V7)
Other databases:
- EMBL: CP000094 - RefSeq: YP_349438.1 - ProteinModelPortal: Q3K9V7 - SMR: Q3K9V7 - STRING: Q3K9V7 - GeneID: 3714601 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_3709 - eggNOG: COG3633 - HOGENOM: HBG289387 - OMA: THIRPIL - ProtClustDB: PRK13628 - BioCyc: PFLU205922:PFL_3709-MONOMER - HAMAP: MF_01582 - InterPro: IPR001991 - InterPro: IPR023025 - PANTHER: PTHR11958 - PRINTS: PR00173
Pfam domain/function: PF00375 SDF
EC number: NA
Molecular weight: Translated: 42713; Mature: 42582
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: PS00713 NA_DICARBOXYL_SYMP_1; PS00714 NA_DICARBOXYL_SYMP_2; PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1153db90)-; HASH(0x12f02a88)-; HASH(0x126568fc)-; HASH(0x1332d6b4)-; HASH(0x136a69b0)-; HASH(0x136421b8)-; HASH(0x136bedf4)-; HASH(0x132bef2c)-; HASH(0x136cb528)-; HASH(0x12f192ac)-;
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFMTASSPSLLQRLKSLSLVTQILIGLIAGIALALFAPEAAKGTAFIGKVFVSALKAVA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH PILVFVLVMASIANHKHGQETHIRPILFLYLLGTFAAAVVAVIASMMFPSHLVLSTDNIA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEE VSAPGGISEVLQSLLLSVVDNPVSALMNANFIGILAWAIGMGVAIRHAGDTTREVLGDLS EECCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHC NGVTVIVRVVIRFAPLGIFGLVASTLATSGFGALIGYAHLLAVLLGCMLFVALVMNPLIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWKLRRNPYPLTLQCLRESGITAFFTRSSAANIPVNLELSKRLGLHEDTYSVSIPLGATI HHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCCEEEEHHHHCCCCCCCEEEEECCCCEE NMAGAAITITVLSLAAVHTLGIAVDIPTAILLSVVAAICACGASGVAGGSLLLIPLACSL ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH FGIPSEIAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAACLGEEQKAQRPA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCH >Mature Secondary Structure PFMTASSPSLLQRLKSLSLVTQILIGLIAGIALALFAPEAAKGTAFIGKVFVSALKAVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH PILVFVLVMASIANHKHGQETHIRPILFLYLLGTFAAAVVAVIASMMFPSHLVLSTDNIA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEE VSAPGGISEVLQSLLLSVVDNPVSALMNANFIGILAWAIGMGVAIRHAGDTTREVLGDLS EECCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHC NGVTVIVRVVIRFAPLGIFGLVASTLATSGFGALIGYAHLLAVLLGCMLFVALVMNPLIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWKLRRNPYPLTLQCLRESGITAFFTRSSAANIPVNLELSKRLGLHEDTYSVSIPLGATI HHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCCEEEEHHHHCCCCCCCEEEEECCCCEE NMAGAAITITVLSLAAVHTLGIAVDIPTAILLSVVAAICACGASGVAGGSLLLIPLACSL ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH FGIPSEIAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAACLGEEQKAQRPA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA