Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459892
Identifier: 77459892
GI number: 77459892
Start: 4154512
End: 4155294
Strand: Reverse
Name: 77459892
Synonym: Pfl01_3670
Alternate gene names: NA
Gene position: 4155294-4154512 (Counterclockwise)
Preceding gene: 77459893
Following gene: 77459891
Centisome position: 64.54
GC content: 64.88
Gene sequence:
>783_bases ATGGGGTTTTTCACGTCACGTTATTGGTCCGTGTGTTGCGCCGTGCTGGCGCTGGTCATGTTCGGGACGCTCAAGGCCCA GGCCGCCAGTTCGGTGCTGATCTGGCCAATCGATCCGGTGTTGGAGGCCGATCAACAGGCGAGTGCGCTGTGGCTGGAAA ATCGCGGCACGGAAACCGCCAACCTGCAGATCCGCGTGTTCGGCTGGAGCCAGAGCGGTTTCGAAGAGCAATACCGCAAT CAACGCGAGGTGATCGGCAGTCCGCCGGTGGCGAAGATCGAGCCGGGTCAGAAGCAACTGGTGCGCCTGACCCGCACCAA GGATGTGCCGCCAGGCCAGGAACTGGCGTACCGGATCATCATCGATGAAATCCCCTCGGCCCAGCCCCCCGTCGCCGAAG ACGGCAAGACCGCTGCGGCGATCCGCTTCCAGATGCGCTACTCGGTGCCACTGTTCGCCTATGGCGCGGGCCTGTGGAGC AAGGAAGACAGCGCCCGTCAGCGTGACCCCAAAGGCATCGGCCTGCCGCAACTGAGCTGGCGCACGGTGGCGGTGGAGGG CCGTCCATATGTGGAAGTTCGCAATCAGGGCGCGGTGCATGCGCGATTGACCGATGTGGCCATCAAGCAGGGCAGCCAAA GCAAACCCTTGGCCGAAGGCCTGCTCGGTTACGTGCTGCCCGGCGCAGTGATGCGCTGGCCGGCACCGGGGCCGGTGACG GGAGAGCTGGCGGGGCGGATCAATGGCGCGGCAAAGGTGCAGAGCATTCCGCCGGCGCGATAG
Upstream 100 bases:
>100_bases CGGACAGGTGCAATTGCCGGGTAATCAGCCCGGGGGGACATACAGCGATGTGTTGCAGGTGCAGCTGTCGTGGTGATGTG AAATGACAAGGAGCAGGTTT
Downstream 100 bases:
>100_bases CCGTAGCGAGTCATGTCGAAGCCTGGCTTCGGCGCCAGCGGTTTCAGGAGGAATCAGTCCATTGACGGACGTAACACGCT AATGAGTCCGGGATGGGCTC
Product: type 1 pili usher pathway chaperone CsuC
Products: NA
Alternate protein names: Type 1 Pili Usher Pathway Chaperone CsuC; Fimbrial Chaperone; P Pilus Assembly Protein Chaperone PapD-Like Protein; CsuC Protein; Pili Assembly Chaperone Transmembrane Protein; P Pilus Assembly Protein Chaperone PapD-Like; Chaperone Protein; Fimbrial Chaperone Protein; Chaperone Protein EcpD; Pilus Assembly Protein Chaperone PapD; Exported Fimbriae-Related Chaperone; Pilus Assembly Protein; CsuC Protein Fimbrial Chaperone Proteins; Putataive Fimbrial Chaperone Protein; Type I Pili; Fimbrial Assembly Chaperone; Pili Assembly Chaperone Transmembrane Protein Papd-Like; PilP Assembly Chaperone Transmembrane Protein; Fimbriae-Assembly Chaperone; Chaperone Protein PmfD; Type 1 Pilus Chaperone FimC; Fimbriae Chaperone; Chaperone Protein MrkB; Type 1 Pili Usher Pathway Chaperone; Type I Pilus Usher Pathway Chaperone CsuC; P Pilus Assembly Protein Chaperone PapD; Pilus Assembly Chaperone; Pili Assembly Chaperone Protein
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGFFTSRYWSVCCAVLALVMFGTLKAQAASSVLIWPIDPVLEADQQASALWLENRGTETANLQIRVFGWSQSGFEEQYRN QREVIGSPPVAKIEPGQKQLVRLTRTKDVPPGQELAYRIIIDEIPSAQPPVAEDGKTAAAIRFQMRYSVPLFAYGAGLWS KEDSARQRDPKGIGLPQLSWRTVAVEGRPYVEVRNQGAVHARLTDVAIKQGSQSKPLAEGLLGYVLPGAVMRWPAPGPVT GELAGRINGAAKVQSIPPAR
Sequences:
>Translated_260_residues MGFFTSRYWSVCCAVLALVMFGTLKAQAASSVLIWPIDPVLEADQQASALWLENRGTETANLQIRVFGWSQSGFEEQYRN QREVIGSPPVAKIEPGQKQLVRLTRTKDVPPGQELAYRIIIDEIPSAQPPVAEDGKTAAAIRFQMRYSVPLFAYGAGLWS KEDSARQRDPKGIGLPQLSWRTVAVEGRPYVEVRNQGAVHARLTDVAIKQGSQSKPLAEGLLGYVLPGAVMRWPAPGPVT GELAGRINGAAKVQSIPPAR >Mature_259_residues GFFTSRYWSVCCAVLALVMFGTLKAQAASSVLIWPIDPVLEADQQASALWLENRGTETANLQIRVFGWSQSGFEEQYRNQ REVIGSPPVAKIEPGQKQLVRLTRTKDVPPGQELAYRIIIDEIPSAQPPVAEDGKTAAAIRFQMRYSVPLFAYGAGLWSK EDSARQRDPKGIGLPQLSWRTVAVEGRPYVEVRNQGAVHARLTDVAIKQGSQSKPLAEGLLGYVLPGAVMRWPAPGPVTG ELAGRINGAAKVQSIPPAR
Specific function: Unknown
COG id: COG3121
COG function: function code NU; P pilus assembly protein, chaperone PapD
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28376; Mature: 28245
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFTSRYWSVCCAVLALVMFGTLKAQAASSVLIWPIDPVLEADQQASALWLENRGTETA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEEEEECCCCCEE NLQIRVFGWSQSGFEEQYRNQREVIGSPPVAKIEPGQKQLVRLTRTKDVPPGQELAYRII EEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHCCCCCCCHHHEEEEE IDEIPSAQPPVAEDGKTAAAIRFQMRYSVPLFAYGAGLWSKEDSARQRDPKGIGLPQLSW EECCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCE RTVAVEGRPYVEVRNQGAVHARLTDVAIKQGSQSKPLAEGLLGYVLPGAVMRWPAPGPVT EEEEECCCCEEEECCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHCCCHHEECCCCCCCC GELAGRINGAAKVQSIPPAR HHHHHCCCCCEEECCCCCCC >Mature Secondary Structure GFFTSRYWSVCCAVLALVMFGTLKAQAASSVLIWPIDPVLEADQQASALWLENRGTETA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEEEEECCCCCEE NLQIRVFGWSQSGFEEQYRNQREVIGSPPVAKIEPGQKQLVRLTRTKDVPPGQELAYRII EEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHCCCCCCCHHHEEEEE IDEIPSAQPPVAEDGKTAAAIRFQMRYSVPLFAYGAGLWSKEDSARQRDPKGIGLPQLSW EECCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCE RTVAVEGRPYVEVRNQGAVHARLTDVAIKQGSQSKPLAEGLLGYVLPGAVMRWPAPGPVT EEEEECCCCEEEECCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHCCCHHEECCCCCCCC GELAGRINGAAKVQSIPPAR HHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA