| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is tusD [H]
Identifier: 77459797
GI number: 77459797
Start: 4042856
End: 4043278
Strand: Direct
Name: tusD [H]
Synonym: Pfl01_3575
Alternate gene names: 77459797
Gene position: 4042856-4043278 (Clockwise)
Preceding gene: 77459796
Following gene: 77459798
Centisome position: 62.79
GC content: 64.78
Gene sequence:
>423_bases ATGGCCGCAGTTTTGCTGATCGAGTCCGTCATGAAGTTCGCCATTGCGCTGTTTTCCGCCGCCCATGCGCCCTCCTCGCG CCGCGCCCTGCTGTTCGCCCAGGCTGCGCTGGCCGGCGGGCATGAAATTGTCCGGCTGTTTTTCTATCAGGACGGGGTCC ACAACGCGTCCGACGCCGTGGTCACGCCGCAGGACGAGCTGGACCTGCCCAAGCAATGGCGCAATTTCATCACCGAACAA AACCTCGACGGCGTGGTGTGCATCGCCGCCGCCCTGCGCCGTGGCGTGTTGAATGCCGAGGAAGCCGGGCGTTATCAGCG TGATGCCGTGGCCGTCAGCGCACCGTGGGAATTGTCCGGCCTCGGCCAGTTGCATGACGCGGTGCAGGATGCCGACCGCC TGATCTGTTTCGGAGGCGCGTGA
Upstream 100 bases:
>100_bases CGCTGGCAGTTGGGCTACATGCCGCGCTGACAGACACCTGATCGCATCAGGACGGACACGGGAAACATCGACTTCGCCGC ACCGCCGAGAAAGCTTTATC
Downstream 100 bases:
>100_bases CATGGCCAAATCCCTTTTGATCATCAGCCGCCAATCGCCGTGGTCCGGCCCCGGCGCCCGCGAAGCGCTGGACATCGTGC TCGCCGGCGGCGCCTTCGAT
Product: sulfur transfer complex subunit TusD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAAVLLIESVMKFAIALFSAAHAPSSRRALLFAQAALAGGHEIVRLFFYQDGVHNASDAVVTPQDELDLPKQWRNFITEQ NLDGVVCIAAALRRGVLNAEEAGRYQRDAVAVSAPWELSGLGQLHDAVQDADRLICFGGA
Sequences:
>Translated_140_residues MAAVLLIESVMKFAIALFSAAHAPSSRRALLFAQAALAGGHEIVRLFFYQDGVHNASDAVVTPQDELDLPKQWRNFITEQ NLDGVVCIAAALRRGVLNAEEAGRYQRDAVAVSAPWELSGLGQLHDAVQDADRLICFGGA >Mature_139_residues AAVLLIESVMKFAIALFSAAHAPSSRRALLFAQAALAGGHEIVRLFFYQDGVHNASDAVVTPQDELDLPKQWRNFITEQN LDGVVCIAAALRRGVLNAEEAGRYQRDAVAVSAPWELSGLGQLHDAVQDADRLICFGGA
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG1553
COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dsrE/tusD family [H]
Homologues:
Organism=Escherichia coli, GI1789743, Length=128, Percent_Identity=38.28125, Blast_Score=90, Evalue=5e-20,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 - InterPro: IPR017463 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 15074; Mature: 14943
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVLLIESVMKFAIALFSAAHAPSSRRALLFAQAALAGGHEIVRLFFYQDGVHNASDAV CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCE VTPQDELDLPKQWRNFITEQNLDGVVCIAAALRRGVLNAEEAGRYQRDAVAVSAPWELSG ECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHCEEEEECCCCCCC LGQLHDAVQDADRLICFGGA HHHHHHHHHHHCCEEEECCC >Mature Secondary Structure AAVLLIESVMKFAIALFSAAHAPSSRRALLFAQAALAGGHEIVRLFFYQDGVHNASDAV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCE VTPQDELDLPKQWRNFITEQNLDGVVCIAAALRRGVLNAEEAGRYQRDAVAVSAPWELSG ECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHCEEEEECCCCCCC LGQLHDAVQDADRLICFGGA HHHHHHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]