| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459726
Identifier: 77459726
GI number: 77459726
Start: 3983888
End: 3985246
Strand: Direct
Name: 77459726
Synonym: Pfl01_3504
Alternate gene names: NA
Gene position: 3983888-3985246 (Clockwise)
Preceding gene: 255961270
Following gene: 255961269
Centisome position: 61.88
GC content: 46.28
Gene sequence:
>1359_bases ATGTCAGACTTGAATAACACGTTAGTTAAGAAGATAAAGGCTAGTAGTGCTCGTTGGAACCCTCTTCGCAAAGTCGATAC GTTAGGCCAATTCGATTTCAATACATGCGTCGTAATGCTCGATTCTTTAGAGAGTCCGTCGGTTAATGGGGTAACTCTGT CCGACTTGGAATCGGTTGAAAAAATTGATCTTGCTACCTGTGAACGGTTGATGAAAGCTTTGGTATTGGCTGTTCATGAG TACACACATTTCGTGGACTCTACATCTACCCTCTGGGGATTGCGTCATCTCAGGATGATGCATAGAGCCTATGTTTGTGT TGATAATGATGAAGCTAAGTTTCACGTGATGCGTTCCTATTACAATCATCTACGGCGGCTCAAGCTTCCACAGTATTACA CTACCGTCTCCCAGCAGTTTATCACTGACCGGCCTTGGTTATCACGGCTCACGACTGGTAGAGAGTTTCGCCCAGATGGT AAGCCGGGCGAACGACCGATACTGTTCGTGCGTTTCTACAACGAAAAATGGGACCCGATAGTGAGGTCGCCAATCTCTAC CATATCACTGCTTGAAACAGGAGCTATGGCGGCGGAGATGGAAGCAGCAAGGTCGCTACTGCGTCGTATTGAAGATGAGG ACCAACGGATCGTAGCAACTAGCCTCTTTGAAGAAAATGCCTTTGAGTATCTATACAATCCGAATTTGACCGAGTATTCA GTGTGTGCTCATTTGGTGGCAAATCGCTTCAACGTAAGTGAGGCGACGTTAGCTTTTTGGGCAGCGTCCGTTATTGCCAA GGTAGCTCTTAATGCGAGCCTCGATGTGTTTGCTACTGTTCTAAAGAACATCCGGGTTTATTTCGCCGGGGTCGGCTTGC GATACTCTGAAGATGAAGCTAAAGCAATTCGTCGAGCTTTGGGCAACAATGATCCTGGCGCGTTATTTTATGTGATCTGC TTTATGATGCACGGCGATGCTCTAAAAAATCCTGTTAGTTTTGGTGCATCCTTAGTGGTAGCGATGGCGAGATTTGGTGT GCACTTCGAAAAAAATTATGAGAGAACAGCACTTGATGAAGCTCAGAGCATCTTTGCTGAGATAAAAGAAAGCTCGTTCG ATACCATTGCACGTGTTGCCTCCGCAGGGTTTGAGAACCTGAACAAAATGATAGGTGGGTTTGGCATGTTGAAACTGACT GACATGCACCTACCACCCGTTTTGTTAGGAGACAGCAAGCAGCATGACTTCCACCCCGCTGATATCAACAAGCTGAAAGG CGTTGACTTGGAAGCTTCCTATTTTGAGATGTCTGAGGGGCAGGAACGAATGCAGAACTTTGGTGATGCGTGTATCTAA
Upstream 100 bases:
>100_bases ACAAAGCGTTCATAAAGCGTTAAGGTATTCTTTTGGCTGGCGTTTCGACATAACAGCATCGCCTGCTTTACCACTGATTA GAAAAGCTAGGACGCAACTG
Downstream 100 bases:
>100_bases GGTTGTTTGTGACAATCCAACATTGACGTTAGCATTATGCTGACATACCATCTGTCATGTGATTTACATAACGTCGATTC GAGGATTCAGTATGGCTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MSDLNNTLVKKIKASSARWNPLRKVDTLGQFDFNTCVVMLDSLESPSVNGVTLSDLESVEKIDLATCERLMKALVLAVHE YTHFVDSTSTLWGLRHLRMMHRAYVCVDNDEAKFHVMRSYYNHLRRLKLPQYYTTVSQQFITDRPWLSRLTTGREFRPDG KPGERPILFVRFYNEKWDPIVRSPISTISLLETGAMAAEMEAARSLLRRIEDEDQRIVATSLFEENAFEYLYNPNLTEYS VCAHLVANRFNVSEATLAFWAASVIAKVALNASLDVFATVLKNIRVYFAGVGLRYSEDEAKAIRRALGNNDPGALFYVIC FMMHGDALKNPVSFGASLVVAMARFGVHFEKNYERTALDEAQSIFAEIKESSFDTIARVASAGFENLNKMIGGFGMLKLT DMHLPPVLLGDSKQHDFHPADINKLKGVDLEASYFEMSEGQERMQNFGDACI
Sequences:
>Translated_452_residues MSDLNNTLVKKIKASSARWNPLRKVDTLGQFDFNTCVVMLDSLESPSVNGVTLSDLESVEKIDLATCERLMKALVLAVHE YTHFVDSTSTLWGLRHLRMMHRAYVCVDNDEAKFHVMRSYYNHLRRLKLPQYYTTVSQQFITDRPWLSRLTTGREFRPDG KPGERPILFVRFYNEKWDPIVRSPISTISLLETGAMAAEMEAARSLLRRIEDEDQRIVATSLFEENAFEYLYNPNLTEYS VCAHLVANRFNVSEATLAFWAASVIAKVALNASLDVFATVLKNIRVYFAGVGLRYSEDEAKAIRRALGNNDPGALFYVIC FMMHGDALKNPVSFGASLVVAMARFGVHFEKNYERTALDEAQSIFAEIKESSFDTIARVASAGFENLNKMIGGFGMLKLT DMHLPPVLLGDSKQHDFHPADINKLKGVDLEASYFEMSEGQERMQNFGDACI >Mature_451_residues SDLNNTLVKKIKASSARWNPLRKVDTLGQFDFNTCVVMLDSLESPSVNGVTLSDLESVEKIDLATCERLMKALVLAVHEY THFVDSTSTLWGLRHLRMMHRAYVCVDNDEAKFHVMRSYYNHLRRLKLPQYYTTVSQQFITDRPWLSRLTTGREFRPDGK PGERPILFVRFYNEKWDPIVRSPISTISLLETGAMAAEMEAARSLLRRIEDEDQRIVATSLFEENAFEYLYNPNLTEYSV CAHLVANRFNVSEATLAFWAASVIAKVALNASLDVFATVLKNIRVYFAGVGLRYSEDEAKAIRRALGNNDPGALFYVICF MMHGDALKNPVSFGASLVVAMARFGVHFEKNYERTALDEAQSIFAEIKESSFDTIARVASAGFENLNKMIGGFGMLKLTD MHLPPVLLGDSKQHDFHPADINKLKGVDLEASYFEMSEGQERMQNFGDACI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51128; Mature: 50997
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLNNTLVKKIKASSARWNPLRKVDTLGQFDFNTCVVMLDSLESPSVNGVTLSDLESVE CCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHEEECCCCCCCCCEEHHHHHHHH KIDLATCERLMKALVLAVHEYTHFVDSTSTLWGLRHLRMMHRAYVCVDNDEAKFHVMRSY HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH YNHLRRLKLPQYYTTVSQQFITDRPWLSRLTTGREFRPDGKPGERPILFVRFYNEKWDPI HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHH VRSPISTISLLETGAMAAEMEAARSLLRRIEDEDQRIVATSLFEENAFEYLYNPNLTEYS HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH VCAHLVANRFNVSEATLAFWAASVIAKVALNASLDVFATVLKNIRVYFAGVGLRYSEDEA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEHEEECCCEECCHHH KAIRRALGNNDPGALFYVICFMMHGDALKNPVSFGASLVVAMARFGVHFEKNYERTALDE HHHHHHHCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHH AQSIFAEIKESSFDTIARVASAGFENLNKMIGGFGMLKLTDMHLPPVLLGDSKQHDFHPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCCCCC DINKLKGVDLEASYFEMSEGQERMQNFGDACI CHHHHCCCCCCHHHHHHHCHHHHHHHCCCCCC >Mature Secondary Structure SDLNNTLVKKIKASSARWNPLRKVDTLGQFDFNTCVVMLDSLESPSVNGVTLSDLESVE CCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHEEECCCCCCCCCEEHHHHHHHH KIDLATCERLMKALVLAVHEYTHFVDSTSTLWGLRHLRMMHRAYVCVDNDEAKFHVMRSY HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH YNHLRRLKLPQYYTTVSQQFITDRPWLSRLTTGREFRPDGKPGERPILFVRFYNEKWDPI HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHH VRSPISTISLLETGAMAAEMEAARSLLRRIEDEDQRIVATSLFEENAFEYLYNPNLTEYS HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH VCAHLVANRFNVSEATLAFWAASVIAKVALNASLDVFATVLKNIRVYFAGVGLRYSEDEA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEHEEECCCEECCHHH KAIRRALGNNDPGALFYVICFMMHGDALKNPVSFGASLVVAMARFGVHFEKNYERTALDE HHHHHHHCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHH AQSIFAEIKESSFDTIARVASAGFENLNKMIGGFGMLKLTDMHLPPVLLGDSKQHDFHPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCCCCC DINKLKGVDLEASYFEMSEGQERMQNFGDACI CHHHHCCCCCCHHHHHHHCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA