| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459720
Identifier: 77459720
GI number: 77459720
Start: 3978739
End: 3979488
Strand: Direct
Name: 77459720
Synonym: Pfl01_3498
Alternate gene names: NA
Gene position: 3978739-3979488 (Clockwise)
Preceding gene: 77459719
Following gene: 77459721
Centisome position: 61.8
GC content: 46.93
Gene sequence:
>750_bases ATGCTCTTGCTCTGGTGGCCTAACATGTGGATGGAAGAACTTCAAAGACAGATTCATAACAACAACGAAGCTATGAGTAA CGCTTTTCCCGCCGTCATTGTTGGTATCTCTAAGCAATACCCCCCAATCGTCTCCGTCAAGCCTCTGTGCCAACGCTACA CAGATGGCGGTGAGAACATGGACGACACCCCAATCATCAACATTCCTGTAGCTATGCAAAGAAGTGGAACAACTATCTTC TACTTCCCAATCAAGGTTGGTGATACAGGCATGTGCATTGTGTCCGATAACGATGCTGAGCATTTCAAGATCGGGAATGG AAGCCCGACAAGGGTTAACTCCAACCGTATGAAAGACCAGATGGATTCTTTCTTTTATCCGGGGATTGGCCCTGCACCTG TAATGGCTTCGCAAGCTCAAAGCATGGTGTTGCCTAAAGATTTCTCTGATGTATTCATTGTGCACAACGTTGGAACTGGA CAAGAGGCCAACGTCACAGTCAAAGCCGATGGCAACATCGAGCTTAATAGTCAGTTCACTGTGAAGGTGAATGCCAGGGA TATCAGTATAACTGCTACCAACAGCATTAGCCTCAATGCTCAATCCATGAGCATCAATGTAGCTAACACACAATGGACAG GCCAGTCTTACGTCACTGGTGAAGTGACAGTTAACGGTATTCCTGTTTCTACACATCACCACATCGGCGTTACACCGGGT AATGGTGTGTCTGGACTTCCAGCAGCATAG
Upstream 100 bases:
>100_bases GAGCAGTTCAAGCACAACATGATTCAGAAGTTCACCATCATCTCTTTCCTGTGGAGTAAACGGGAGGGGGATTTTTATGT GGTTCAGGACAGTAAGGGCA
Downstream 100 bases:
>100_bases CGCAATATCCCTCTAATCCTCTACAAGCTCTTACTGAGCGTTTTAAGCACAGAGCTATGCAATGGCATTCCTTTGTGCTT AGAACGTCCTATGACGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLLLWWPNMWMEELQRQIHNNNEAMSNAFPAVIVGISKQYPPIVSVKPLCQRYTDGGENMDDTPIINIPVAMQRSGTTIF YFPIKVGDTGMCIVSDNDAEHFKIGNGSPTRVNSNRMKDQMDSFFYPGIGPAPVMASQAQSMVLPKDFSDVFIVHNVGTG QEANVTVKADGNIELNSQFTVKVNARDISITATNSISLNAQSMSINVANTQWTGQSYVTGEVTVNGIPVSTHHHIGVTPG NGVSGLPAA
Sequences:
>Translated_249_residues MLLLWWPNMWMEELQRQIHNNNEAMSNAFPAVIVGISKQYPPIVSVKPLCQRYTDGGENMDDTPIINIPVAMQRSGTTIF YFPIKVGDTGMCIVSDNDAEHFKIGNGSPTRVNSNRMKDQMDSFFYPGIGPAPVMASQAQSMVLPKDFSDVFIVHNVGTG QEANVTVKADGNIELNSQFTVKVNARDISITATNSISLNAQSMSINVANTQWTGQSYVTGEVTVNGIPVSTHHHIGVTPG NGVSGLPAA >Mature_249_residues MLLLWWPNMWMEELQRQIHNNNEAMSNAFPAVIVGISKQYPPIVSVKPLCQRYTDGGENMDDTPIINIPVAMQRSGTTIF YFPIKVGDTGMCIVSDNDAEHFKIGNGSPTRVNSNRMKDQMDSFFYPGIGPAPVMASQAQSMVLPKDFSDVFIVHNVGTG QEANVTVKADGNIELNSQFTVKVNARDISITATNSISLNAQSMSINVANTQWTGQSYVTGEVTVNGIPVSTHHHIGVTPG NGVSGLPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27013; Mature: 27013
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLWWPNMWMEELQRQIHNNNEAMSNAFPAVIVGISKQYPPIVSVKPLCQRYTDGGENM CEEEEECHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCC DDTPIINIPVAMQRSGTTIFYFPIKVGDTGMCIVSDNDAEHFKIGNGSPTRVNSNRMKDQ CCCCEEEEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCEECCHHHHHH MDSFFYPGIGPAPVMASQAQSMVLPKDFSDVFIVHNVGTGQEANVTVKADGNIELNSQFT HHHHCCCCCCCCCHHHHCHHCEECCCCCCCEEEEEECCCCCCCEEEEEECCCEEECCEEE VKVNARDISITATNSISLNAQSMSINVANTQWTGQSYVTGEVTVNGIPVSTHHHIGVTPG EEEECEEEEEEEECEEEEEEEEEEEEEECCEECCCEEEEEEEEECCEEECCCCEEEECCC NGVSGLPAA CCCCCCCCC >Mature Secondary Structure MLLLWWPNMWMEELQRQIHNNNEAMSNAFPAVIVGISKQYPPIVSVKPLCQRYTDGGENM CEEEEECHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCC DDTPIINIPVAMQRSGTTIFYFPIKVGDTGMCIVSDNDAEHFKIGNGSPTRVNSNRMKDQ CCCCEEEEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCEECCHHHHHH MDSFFYPGIGPAPVMASQAQSMVLPKDFSDVFIVHNVGTGQEANVTVKADGNIELNSQFT HHHHCCCCCCCCCHHHHCHHCEECCCCCCCEEEEEECCCCCCCEEEEEECCCEEECCEEE VKVNARDISITATNSISLNAQSMSINVANTQWTGQSYVTGEVTVNGIPVSTHHHIGVTPG EEEECEEEEEEEECEEEEEEEEEEEEEECCEECCCEEEEEEEEECCEEECCCCEEEECCC NGVSGLPAA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA