| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459718
Identifier: 77459718
GI number: 77459718
Start: 3975806
End: 3978178
Strand: Direct
Name: 77459718
Synonym: Pfl01_3496
Alternate gene names: NA
Gene position: 3975806-3978178 (Clockwise)
Preceding gene: 77459717
Following gene: 77459719
Centisome position: 61.75
GC content: 50.27
Gene sequence:
>2373_bases ATGAGTATGACTGATCAAACTCTAGCCCAGCTCTTCGCTTCAATCGCTTTCAAAGTAGACCAAACAGGAATCAAACAAGC ACAGCAACTTCTAAGGGCTATAGAGAAGCAAGCACAGGCAACAGGCAGAGCGATTGACAAAGCACTTAAAGGCTCTGGTG GTCGGAATGCCAATAATCTTGTAGCAGCACAGAAAGCAGCAACACAACAACAGTTCGCACAACAACTACAGAACGCAAAG CTCACTAAGATTCAGGGTCAAGCAGCCGCCTCTAATGCTGCATATGGACTCAAGACACAACAACAGCAAGTGGCCTTAGC AATCAAACAACAAAAGTTGGCAGCAGCTACACAGGCAACACAAGCCGCCGCTGCTAAGCAAAGTCTTCAGCAACAAGCTC AAATCCTCGCCAACCAGATCAAGCAACACAGCTTGACTAACCGTAATGCTGCTGCTGCCCAACAACACCAACTACGTCAA CTGAGAATCCAAGCTGCACAACACAGAGCAGCCCGTCAGGCTTCTGGCCTTGCTGGTGGTAGTGGTCGTAGCTTCCATGG GTACGGTGGACATGGTGGGGGTGGGTTGCTTGGCGTTGGTCATAGCTCGCTACACGGCTTTGGCGGTATCGGTCGTTTTG CTGGTGGTGTCACAGGTAGTGCTGAAGGTGCTCTAGGGGGCTTGGAAGGGCTTGCAGGCGGTTTGGGTCGTGCCTCTATG GGGTTGGGTGCTGTCGCTGGTAGTGCTGCCCTTGTGGTGGCTGCGTTCGCTGCTATCAACGCCGCTGCTGTGGGTTATGC CCGTGAAGCTGAACGAGCTTCCAACACACGTAACCAACGGATGGGACAGTTTGAGTCTGTAGGCGACCGTACAGCGGCAA ACGCCGAACGCATGAACAACCGCTATGAGAACTTCGCACAGAAGGAAGGCTTGAACGCTGCACAGCTTGGCCCTGACTAC GCCAAGATTGTTGGTGCTCTCTCTCCCAAGATCGGAGTAGACAAAGCCGCCGATACCACAGAGGGAATCATGAGGTACGG CAAGGCTCAACACCTGTCGAATGAAAACATGTCCAAGATCAGTCTGGGTATGCGTCAGGCTCTCGGTAAAGGTCAGTTGT TCTCTGAGGAATGGACAGGCCAGATTGCTGAGCACCTTGGAGCACACGCTAACGAGTTTGGTGCTCAAGCTTGGCAACGT GCTACAGGCGGTAAACTGACAGGAGACGCAGCCCAGAAAGCATTCGGTAAAGATCGCCAAGACAGAAAGATCAGTGGTGA CGCGCTTACCAAGTTCATGGTTGAACTAGGCCAAGTGCTTAACCAACATGCTAACGATGGTGGGTTGCTGGATAAGGCAC GTAATACCCAAGACTCTTGGGATAACCGTATCGCTAACCAGTATCAGGCCAACATGGTTAAGGCTTACGACAATACTGGC CTACACGACACAATGACAGGTAGTGGTGGTTTGTATGACAGCTTCTTGAAGTTTATGAATGAGCTTCAGCCTGAGTTTGT CGCTATCGGCAGTGCCTCTAACTCTGTCCTGCAAGGTTTGACAGGTATCACCAAATGGCTGACAGGTGTTGCAGCATGGT TCAACAACGGTGAAAGCTACTTTGATCCTAAGTTCACTAGGGATATGGGGAATGCTTTTGCAGAGCTTGGACAGTCGCTA ACAACGCTATGGAACACGGTAGCTCAAATCCTCGGACTCTCTGAGCAAGCTGGAGTATTCAAGACCTCTGGTGAAGTGGT GATTGGCGTACTTACAAGTATGGTGGATGTGTTCACTATCCTTGCTGATGCAGTAATCGGCACAATCCGTCTAATCCAAG ATGCACTACATGCACTGCCAGATAGCCTAGGCGGCATCAGTGATGATAGTTACGCCAAGATTGTTGCACAGCGTCAAGTT GATGATAAGAAGCGAGCCGACATTGCAGCAGCAAGAGAGCTAGACCGTCATGGCGGTGGCCCAATGCCTAACCCTAACGG TAACGTTGATCCTAACGCACCTTGGAGAGTTACAGACGGTAGCGACATTCCTACTGTACCCAACACTCCCAAAGACTGGC GTGTGACTGATGGAAGCGATATCCCAGTTATTGATAGTAAGGCTGTAGCTGCGATGTCTCAAGCTCCAATCACTAATCCT GTTCAACCCGCACTCAACGGTAAAGACTTGGCTCCAACAACAGTGAACAACAACATCATTGTTAACCAAGCTCCAATCAA TATCAGTGGTGTTGAGACTGACAAGGTTAGCGGGATGCTTGAAAAGCACAGAGAAGAAAGCAAGAAAGAGCTTCAGCAAG TCGTTGACAAGCTGTCCCCACCATCTAACGGGTATAGAGCAAGAGGTAACTAA
Upstream 100 bases:
>100_bases ATTTGATTAGCGGTATTGCTGATGCACCTGAAGAAGTGCGTGAAGCTGCTCTCGTTGCTCTTCAAGCTCGCCTAGCGGCT GTAGGCAAGGAGTAAGATGT
Downstream 100 bases:
>100_bases TGGCTATTTCCCCAGCTTCTAACGTTGTCTGGGGATGGTTGTTCGCCGCTTGTATGTTTGTCTTGGTTGGGTGTTCCATC CTCACTGTGAACGCGCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 790; Mature: 789
Protein sequence:
>790_residues MSMTDQTLAQLFASIAFKVDQTGIKQAQQLLRAIEKQAQATGRAIDKALKGSGGRNANNLVAAQKAATQQQFAQQLQNAK LTKIQGQAAASNAAYGLKTQQQQVALAIKQQKLAAATQATQAAAAKQSLQQQAQILANQIKQHSLTNRNAAAAQQHQLRQ LRIQAAQHRAARQASGLAGGSGRSFHGYGGHGGGGLLGVGHSSLHGFGGIGRFAGGVTGSAEGALGGLEGLAGGLGRASM GLGAVAGSAALVVAAFAAINAAAVGYAREAERASNTRNQRMGQFESVGDRTAANAERMNNRYENFAQKEGLNAAQLGPDY AKIVGALSPKIGVDKAADTTEGIMRYGKAQHLSNENMSKISLGMRQALGKGQLFSEEWTGQIAEHLGAHANEFGAQAWQR ATGGKLTGDAAQKAFGKDRQDRKISGDALTKFMVELGQVLNQHANDGGLLDKARNTQDSWDNRIANQYQANMVKAYDNTG LHDTMTGSGGLYDSFLKFMNELQPEFVAIGSASNSVLQGLTGITKWLTGVAAWFNNGESYFDPKFTRDMGNAFAELGQSL TTLWNTVAQILGLSEQAGVFKTSGEVVIGVLTSMVDVFTILADAVIGTIRLIQDALHALPDSLGGISDDSYAKIVAQRQV DDKKRADIAAARELDRHGGGPMPNPNGNVDPNAPWRVTDGSDIPTVPNTPKDWRVTDGSDIPVIDSKAVAAMSQAPITNP VQPALNGKDLAPTTVNNNIIVNQAPINISGVETDKVSGMLEKHREESKKELQQVVDKLSPPSNGYRARGN
Sequences:
>Translated_790_residues MSMTDQTLAQLFASIAFKVDQTGIKQAQQLLRAIEKQAQATGRAIDKALKGSGGRNANNLVAAQKAATQQQFAQQLQNAK LTKIQGQAAASNAAYGLKTQQQQVALAIKQQKLAAATQATQAAAAKQSLQQQAQILANQIKQHSLTNRNAAAAQQHQLRQ LRIQAAQHRAARQASGLAGGSGRSFHGYGGHGGGGLLGVGHSSLHGFGGIGRFAGGVTGSAEGALGGLEGLAGGLGRASM GLGAVAGSAALVVAAFAAINAAAVGYAREAERASNTRNQRMGQFESVGDRTAANAERMNNRYENFAQKEGLNAAQLGPDY AKIVGALSPKIGVDKAADTTEGIMRYGKAQHLSNENMSKISLGMRQALGKGQLFSEEWTGQIAEHLGAHANEFGAQAWQR ATGGKLTGDAAQKAFGKDRQDRKISGDALTKFMVELGQVLNQHANDGGLLDKARNTQDSWDNRIANQYQANMVKAYDNTG LHDTMTGSGGLYDSFLKFMNELQPEFVAIGSASNSVLQGLTGITKWLTGVAAWFNNGESYFDPKFTRDMGNAFAELGQSL TTLWNTVAQILGLSEQAGVFKTSGEVVIGVLTSMVDVFTILADAVIGTIRLIQDALHALPDSLGGISDDSYAKIVAQRQV DDKKRADIAAARELDRHGGGPMPNPNGNVDPNAPWRVTDGSDIPTVPNTPKDWRVTDGSDIPVIDSKAVAAMSQAPITNP VQPALNGKDLAPTTVNNNIIVNQAPINISGVETDKVSGMLEKHREESKKELQQVVDKLSPPSNGYRARGN >Mature_789_residues SMTDQTLAQLFASIAFKVDQTGIKQAQQLLRAIEKQAQATGRAIDKALKGSGGRNANNLVAAQKAATQQQFAQQLQNAKL TKIQGQAAASNAAYGLKTQQQQVALAIKQQKLAAATQATQAAAAKQSLQQQAQILANQIKQHSLTNRNAAAAQQHQLRQL RIQAAQHRAARQASGLAGGSGRSFHGYGGHGGGGLLGVGHSSLHGFGGIGRFAGGVTGSAEGALGGLEGLAGGLGRASMG LGAVAGSAALVVAAFAAINAAAVGYAREAERASNTRNQRMGQFESVGDRTAANAERMNNRYENFAQKEGLNAAQLGPDYA KIVGALSPKIGVDKAADTTEGIMRYGKAQHLSNENMSKISLGMRQALGKGQLFSEEWTGQIAEHLGAHANEFGAQAWQRA TGGKLTGDAAQKAFGKDRQDRKISGDALTKFMVELGQVLNQHANDGGLLDKARNTQDSWDNRIANQYQANMVKAYDNTGL HDTMTGSGGLYDSFLKFMNELQPEFVAIGSASNSVLQGLTGITKWLTGVAAWFNNGESYFDPKFTRDMGNAFAELGQSLT TLWNTVAQILGLSEQAGVFKTSGEVVIGVLTSMVDVFTILADAVIGTIRLIQDALHALPDSLGGISDDSYAKIVAQRQVD DKKRADIAAARELDRHGGGPMPNPNGNVDPNAPWRVTDGSDIPTVPNTPKDWRVTDGSDIPVIDSKAVAAMSQAPITNPV QPALNGKDLAPTTVNNNIIVNQAPINISGVETDKVSGMLEKHREESKKELQQVVDKLSPPSNGYRARGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83327; Mature: 83196
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTDQTLAQLFASIAFKVDQTGIKQAQQLLRAIEKQAQATGRAIDKALKGSGGRNANNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VAAQKAATQQQFAQQLQNAKLTKIQGQAAASNAAYGLKTQQQQVALAIKQQKLAAATQAT HHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QAAAAKQSLQQQAQILANQIKQHSLTNRNAAAAQQHQLRQLRIQAAQHRAARQASGLAGG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SGRSFHGYGGHGGGGLLGVGHSSLHGFGGIGRFAGGVTGSAEGALGGLEGLAGGLGRASM CCCCCCCCCCCCCCCEEECCCHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHH GLGAVAGSAALVVAAFAAINAAAVGYAREAERASNTRNQRMGQFESVGDRTAANAERMNN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RYENFAQKEGLNAAQLGPDYAKIVGALSPKIGVDKAADTTEGIMRYGKAQHLSNENMSKI HHHHHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH SLGMRQALGKGQLFSEEWTGQIAEHLGAHANEFGAQAWQRATGGKLTGDAAQKAFGKDRQ HHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC DRKISGDALTKFMVELGQVLNQHANDGGLLDKARNTQDSWDNRIANQYQANMVKAYDNTG CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC LHDTMTGSGGLYDSFLKFMNELQPEFVAIGSASNSVLQGLTGITKWLTGVAAWFNNGESY CCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC FDPKFTRDMGNAFAELGQSLTTLWNTVAQILGLSEQAGVFKTSGEVVIGVLTSMVDVFTI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCHHHHHHHHHHHHHHHH LADAVIGTIRLIQDALHALPDSLGGISDDSYAKIVAQRQVDDKKRADIAAARELDRHGGG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC PMPNPNGNVDPNAPWRVTDGSDIPTVPNTPKDWRVTDGSDIPVIDSKAVAAMSQAPITNP CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHCCCCCCC VQPALNGKDLAPTTVNNNIIVNQAPINISGVETDKVSGMLEKHREESKKELQQVVDKLSP CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSNGYRARGN CCCCCCCCCC >Mature Secondary Structure SMTDQTLAQLFASIAFKVDQTGIKQAQQLLRAIEKQAQATGRAIDKALKGSGGRNANNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VAAQKAATQQQFAQQLQNAKLTKIQGQAAASNAAYGLKTQQQQVALAIKQQKLAAATQAT HHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QAAAAKQSLQQQAQILANQIKQHSLTNRNAAAAQQHQLRQLRIQAAQHRAARQASGLAGG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SGRSFHGYGGHGGGGLLGVGHSSLHGFGGIGRFAGGVTGSAEGALGGLEGLAGGLGRASM CCCCCCCCCCCCCCCEEECCCHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHH GLGAVAGSAALVVAAFAAINAAAVGYAREAERASNTRNQRMGQFESVGDRTAANAERMNN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RYENFAQKEGLNAAQLGPDYAKIVGALSPKIGVDKAADTTEGIMRYGKAQHLSNENMSKI HHHHHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH SLGMRQALGKGQLFSEEWTGQIAEHLGAHANEFGAQAWQRATGGKLTGDAAQKAFGKDRQ HHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC DRKISGDALTKFMVELGQVLNQHANDGGLLDKARNTQDSWDNRIANQYQANMVKAYDNTG CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC LHDTMTGSGGLYDSFLKFMNELQPEFVAIGSASNSVLQGLTGITKWLTGVAAWFNNGESY CCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC FDPKFTRDMGNAFAELGQSLTTLWNTVAQILGLSEQAGVFKTSGEVVIGVLTSMVDVFTI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCHHHHHHHHHHHHHHHH LADAVIGTIRLIQDALHALPDSLGGISDDSYAKIVAQRQVDDKKRADIAAARELDRHGGG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC PMPNPNGNVDPNAPWRVTDGSDIPTVPNTPKDWRVTDGSDIPVIDSKAVAAMSQAPITNP CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHCCCCCCC VQPALNGKDLAPTTVNNNIIVNQAPINISGVETDKVSGMLEKHREESKKELQQVVDKLSP CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSNGYRARGN CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA