| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459709
Identifier: 77459709
GI number: 77459709
Start: 3970042
End: 3971088
Strand: Direct
Name: 77459709
Synonym: Pfl01_3487
Alternate gene names: NA
Gene position: 3970042-3971088 (Clockwise)
Preceding gene: 77459708
Following gene: 77459710
Centisome position: 61.66
GC content: 51.19
Gene sequence:
>1047_bases ATGACCGACACAAAAATTAAACCAGTTTTGACAGTAGCCGATGCACAGAAGGTGATTGCACTCCGCAAGACTGGCATGTC CCGAGCTAAGATCATCGCCGCTACCGGCTTCCCTGAACGCTTCGTCCGTGAACACATGGCAGGCGTTGAAGTAGACCAAG CCACCAAAGCCCCATCCTCTGACTTTGAAAAGGCCGTTGCCCGCGTCTTCCCTTTGTCTGTACGTCCACAAGGCATCAAG GATTACGAGCTACGCCAAGCCCTGTACGAAGTGTACGGCACCAAGTGGAGCGAAGAGAAAGGCACCTTCGAAGCCGCTTA CGACAAGAGCACAATGAGCCGCATCAAGGCCCGCTGCCGTGAACTGGCTAGGGGTACTGATCAAACAGCCCTGTTCGTGA TGGACTGGATTTGTGACGAAGCCCCAACAGCCAGCCGTGTTGCCCTGGAGCAACTGGCCCTTGAGCTTGAAGAAGTGATT CAAGACAAGGTGAACAGCTTCATGGAAATGTACGCCACTGGCTACGACGCTGACCAACTGGAAAGCACCGAAGCCCAACG CAAGCAACAGTATGCAGCACGCCGCCACCTGTTGAAGCTCGCTATCAAAGAGTACAGCCAAGAAAGCACAGTCACTCTTC TGGCACGCACCCTAAGCGTCACAGATGCCATGGAAGCGACAAGTGATGTGTCTACCCCTGTTATCACACAGAAAACCCCA CAACGCTCTGTAGAAGCTCCTGTAGCCATTCAGGAAGACAGCCTTGACGCATTCTTTGAAGAAGCTGTAATGCTTGCCGA AGCAGCAGTTGTGACACGTGCGGAAGTACCAGTTACTAACACAACGTCTGTGCAAGAAGCAACAAACGTGATTGACTACA TCTTCCCACCTGCTGTAGACTATGCACCAATTGTTGTCAAGCCTACAACTACCCAAAACGAAGAAGAAGACTTGTTTGGG GAGCTACTGGAGTACACACCACAAATCACAGCTAGAGGGGGATACAATGCAACTGATCTATTCACTCAATCTCAAACCAC AGAATAA
Upstream 100 bases:
>100_bases TAGAGGTGTAGGGGAAAGAAAATCTTTCACGCACAGTTTTATCTGGCTGAGGAACAACCCAATGAAATGAAACCATATCG CACAAGGAATAACAACCGCT
Downstream 100 bases:
>100_bases CCGTGACCGTAAAGCAGAACAGCTTGCTGATGATTGGATGAACGGCAAGGTGAAAGTGCTGGAGACAATCCCTGTACCGA TAATCACCAAGCGTGAGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTDTKIKPVLTVADAQKVIALRKTGMSRAKIIAATGFPERFVREHMAGVEVDQATKAPSSDFEKAVARVFPLSVRPQGIK DYELRQALYEVYGTKWSEEKGTFEAAYDKSTMSRIKARCRELARGTDQTALFVMDWICDEAPTASRVALEQLALELEEVI QDKVNSFMEMYATGYDADQLESTEAQRKQQYAARRHLLKLAIKEYSQESTVTLLARTLSVTDAMEATSDVSTPVITQKTP QRSVEAPVAIQEDSLDAFFEEAVMLAEAAVVTRAEVPVTNTTSVQEATNVIDYIFPPAVDYAPIVVKPTTTQNEEEDLFG ELLEYTPQITARGGYNATDLFTQSQTTE
Sequences:
>Translated_348_residues MTDTKIKPVLTVADAQKVIALRKTGMSRAKIIAATGFPERFVREHMAGVEVDQATKAPSSDFEKAVARVFPLSVRPQGIK DYELRQALYEVYGTKWSEEKGTFEAAYDKSTMSRIKARCRELARGTDQTALFVMDWICDEAPTASRVALEQLALELEEVI QDKVNSFMEMYATGYDADQLESTEAQRKQQYAARRHLLKLAIKEYSQESTVTLLARTLSVTDAMEATSDVSTPVITQKTP QRSVEAPVAIQEDSLDAFFEEAVMLAEAAVVTRAEVPVTNTTSVQEATNVIDYIFPPAVDYAPIVVKPTTTQNEEEDLFG ELLEYTPQITARGGYNATDLFTQSQTTE >Mature_347_residues TDTKIKPVLTVADAQKVIALRKTGMSRAKIIAATGFPERFVREHMAGVEVDQATKAPSSDFEKAVARVFPLSVRPQGIKD YELRQALYEVYGTKWSEEKGTFEAAYDKSTMSRIKARCRELARGTDQTALFVMDWICDEAPTASRVALEQLALELEEVIQ DKVNSFMEMYATGYDADQLESTEAQRKQQYAARRHLLKLAIKEYSQESTVTLLARTLSVTDAMEATSDVSTPVITQKTPQ RSVEAPVAIQEDSLDAFFEEAVMLAEAAVVTRAEVPVTNTTSVQEATNVIDYIFPPAVDYAPIVVKPTTTQNEEEDLFGE LLEYTPQITARGGYNATDLFTQSQTTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38698; Mature: 38567
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTKIKPVLTVADAQKVIALRKTGMSRAKIIAATGFPERFVREHMAGVEVDQATKAPSS CCCCCCCCEEEHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHCCCCHHHHCCCCCH DFEKAVARVFPLSVRPQGIKDYELRQALYEVYGTKWSEEKGTFEAAYDKSTMSRIKARCR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELARGTDQTALFVMDWICDEAPTASRVALEQLALELEEVIQDKVNSFMEMYATGYDADQL HHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ESTEAQRKQQYAARRHLLKLAIKEYSQESTVTLLARTLSVTDAMEATSDVSTPVITQKTP HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QRSVEAPVAIQEDSLDAFFEEAVMLAEAAVVTRAEVPVTNTTSVQEATNVIDYIFPPAVD CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC YAPIVVKPTTTQNEEEDLFGELLEYTPQITARGGYNATDLFTQSQTTE CCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCCC >Mature Secondary Structure TDTKIKPVLTVADAQKVIALRKTGMSRAKIIAATGFPERFVREHMAGVEVDQATKAPSS CCCCCCCEEEHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHCCCCHHHHCCCCCH DFEKAVARVFPLSVRPQGIKDYELRQALYEVYGTKWSEEKGTFEAAYDKSTMSRIKARCR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELARGTDQTALFVMDWICDEAPTASRVALEQLALELEEVIQDKVNSFMEMYATGYDADQL HHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ESTEAQRKQQYAARRHLLKLAIKEYSQESTVTLLARTLSVTDAMEATSDVSTPVITQKTP HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QRSVEAPVAIQEDSLDAFFEEAVMLAEAAVVTRAEVPVTNTTSVQEATNVIDYIFPPAVD CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC YAPIVVKPTTTQNEEEDLFGELLEYTPQITARGGYNATDLFTQSQTTE CCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA