| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458805
Identifier: 77458805
GI number: 77458805
Start: 2956907
End: 2957488
Strand: Direct
Name: 77458805
Synonym: Pfl01_2580
Alternate gene names: NA
Gene position: 2956907-2957488 (Clockwise)
Preceding gene: 77458804
Following gene: 77458806
Centisome position: 45.93
GC content: 62.71
Gene sequence:
>582_bases ATGACTCAGCCACTGTCCCACCATTTGCTGACCATGGCCTATCAGAACGCCTGGGCCAACCATCGACTGGCCAAGGCCTG GAGTCAGCTCGACGACGCGCAGCTGGCAGCGCCACGGGTCAGTTTCTTCCCGAGCATCCGCCTGACCCTCAACCACATCC TCACCTGCGACTGGTTCTACGTCGACGCGCTGGAGCGCGAGTTGCGCGGTGACGAACCGCATCCCGATTGCTATGTGTTC TTCAACGCTGAGGAACCCTTCACCGAGGCGCAGGCCTTGCGCCGTGAACAGGCCCATGTCGACCGTCGACTGATCGCCTA CTGCGAGCAACTGCGCGATGCCGATCTGGGGCGCATCGTCACCATCGCCCGCGACACCCCGCAGCACGACAGTCGCCTGC GGATGATCTCGCACCTGTTCGAACATCAGATTCACCATCGTGGCCAGGTCCACGCCATGCTCAGCGGCACCTCGGTGAAG CCACCGCAACTGGACGAGTTTTTCTGTGTCGGCGAGTCCGGTCTGCGAGCCGAGGATTTCGCCGAACTGGGCTGGACCGA AGCGCTTGTCTGGGGGCACTGA
Upstream 100 bases:
>100_bases CCGAGGGCTATCTGGAATTCCCGTTCCGCCGGACCCTCAGCCGCTTGCAGGAGATGCAGCTGCAACGCTTTGCCGAGAGC TGAAACACGGAGGGCGCGAC
Downstream 100 bases:
>100_bases AAACGCCGGGTTGTCGCCGGGGCCTGCCTCGCGCTAAGGTCGCCGAGCCTATCAGTGCGTATCAAACGCGCCGGGGCCCT GTGCGATCGAGGAAGGAAAT
Product: DinB
Products: NA
Alternate protein names: Nuclease Inhibitor; Damage Inducible Protein; DinB Family
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTQPLSHHLLTMAYQNAWANHRLAKAWSQLDDAQLAAPRVSFFPSIRLTLNHILTCDWFYVDALERELRGDEPHPDCYVF FNAEEPFTEAQALRREQAHVDRRLIAYCEQLRDADLGRIVTIARDTPQHDSRLRMISHLFEHQIHHRGQVHAMLSGTSVK PPQLDEFFCVGESGLRAEDFAELGWTEALVWGH
Sequences:
>Translated_193_residues MTQPLSHHLLTMAYQNAWANHRLAKAWSQLDDAQLAAPRVSFFPSIRLTLNHILTCDWFYVDALERELRGDEPHPDCYVF FNAEEPFTEAQALRREQAHVDRRLIAYCEQLRDADLGRIVTIARDTPQHDSRLRMISHLFEHQIHHRGQVHAMLSGTSVK PPQLDEFFCVGESGLRAEDFAELGWTEALVWGH >Mature_192_residues TQPLSHHLLTMAYQNAWANHRLAKAWSQLDDAQLAAPRVSFFPSIRLTLNHILTCDWFYVDALERELRGDEPHPDCYVFF NAEEPFTEAQALRREQAHVDRRLIAYCEQLRDADLGRIVTIARDTPQHDSRLRMISHLFEHQIHHRGQVHAMLSGTSVKP PQLDEFFCVGESGLRAEDFAELGWTEALVWGH
Specific function: Unknown
COG id: COG2318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22338; Mature: 22207
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPLSHHLLTMAYQNAWANHRLAKAWSQLDDAQLAAPRVSFFPSIRLTLNHILTCDWFY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCHHHHHHHHHHHHHHHH VDALERELRGDEPHPDCYVFFNAEEPFTEAQALRREQAHVDRRLIAYCEQLRDADLGRIV HHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE TIARDTPQHDSRLRMISHLFEHQIHHRGQVHAMLSGTSVKPPQLDEFFCVGESGLRAEDF EEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHH AELGWTEALVWGH HHCCCHHHHCCCC >Mature Secondary Structure TQPLSHHLLTMAYQNAWANHRLAKAWSQLDDAQLAAPRVSFFPSIRLTLNHILTCDWFY CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCHHHHHHHHHHHHHHHH VDALERELRGDEPHPDCYVFFNAEEPFTEAQALRREQAHVDRRLIAYCEQLRDADLGRIV HHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE TIARDTPQHDSRLRMISHLFEHQIHHRGQVHAMLSGTSVKPPQLDEFFCVGESGLRAEDF EEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHH AELGWTEALVWGH HHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA