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The map label for this gene is yhcM [H]

Identifier: 77458804

GI number: 77458804

Start: 2955771

End: 2956889

Strand: Direct

Name: yhcM [H]

Synonym: Pfl01_2579

Alternate gene names: 77458804

Gene position: 2955771-2956889 (Clockwise)

Preceding gene: 77458803

Following gene: 77458805

Centisome position: 45.91

GC content: 63.09

Gene sequence:

>1119_bases
ATGACTTTCGACTCCCCCTTGAGCGCCTGGCAGTACGCCGTCGACCACAAGGGCTTCATCCAGGATGAAGCCCAGGAACA
CGCGGTTTGGGCCTTGCAAAAATGCCATGAAGCCCTGCACGCCGGTGCCCGTTCGGTCACTGGCGTTTACCTGTGGGGCC
CGGTCGGGCGCGGCAAGACCTGGCTGATGGATCAGTTTCATCAGAGCCTGCGGGTGCCGGCGCGGCGGCAACACTTTCAT
CACTTCATGGGCTGGGTGCACCAGCGTTCCTTTCAGTTGACCGGGATCGCCGATCCATTGCGGGCGCTGGCTCGTGAGCT
GGCGGCCGAGGTGCGGGTGCTGTGTTTCGATGAGCTGTTCGTCAATGACATCGGTGACGCGATCATTCTCGGGCGCCTGT
TTCAGGTGATGTTCGAGGAAGGTGTGGTGGTGGTCTGCACCTCCAACCTGCCGCCGGATCAGTTGTATGCCGACGGCTTC
AACCGCGACCGTTTCCTGCCGGCAATCACCGAGATCAAGCAGCACATGCAAGTGGTCGCGGTGAATGGCGCGGAAGATCA
TCGCTTGCATCCCGGCGCCATCGAGCAGCGTTACTGGGTCGCTCTGCCGGAGCAGGGTAGCGCGTTGAGCCAGGTGTTCG
ACGCGTTGGCCGCCGGGCAAACCGTCAGTGCCGAACCGGTGCCGGTGGGTTACCGCGCCTTGAGCGTGGTGCAGGCCAGC
GATTCGGTGCTGTGGTGCCGTTACGCCGACCTGTGCGAGCAACCCTTCGCCGCCATGGATTTCATCGCGCTGTGCGACAC
CTACCGGGCTATCCTGTTGAGCGAGGTGCCGAACCTCAGTGCGAAAAAACGCGAAGGGCGGATTGCCCGTGGCACCGAGG
ACGGGGCGGAACGGGTGGTGGCCGGCGATCGGGAATTGCCGCAGTTGTCGGTGCACGACGACGGTGTGCGCCGCTTCATC
GCACTGGTCGACGAGTGCTACGACCGGAAAGTGCCGCTGTACATCGAGGCCGAAGTGCCGATGGACGCGCTGTATACCGA
GGGCTATCTGGAATTCCCGTTCCGCCGGACCCTCAGCCGCTTGCAGGAGATGCAGCTGCAACGCTTTGCCGAGAGCTGA

Upstream 100 bases:

>100_bases
GGCAGCCCGCTGGAGCTGCGCTACACGTTCCGGCTCAACGAACAGGGCAAAATCGCTCGGCTGGATATTTCCCTGTAGCC
GTCGTGGCATACTGCCGCGC

Downstream 100 bases:

>100_bases
AACACGGAGGGCGCGACATGACTCAGCCACTGTCCCACCATTTGCTGACCATGGCCTATCAGAACGCCTGGGCCAACCAT
CGACTGGCCAAGGCCTGGAG

Product: AFG1-like ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTFDSPLSAWQYAVDHKGFIQDEAQEHAVWALQKCHEALHAGARSVTGVYLWGPVGRGKTWLMDQFHQSLRVPARRQHFH
HFMGWVHQRSFQLTGIADPLRALARELAAEVRVLCFDELFVNDIGDAIILGRLFQVMFEEGVVVVCTSNLPPDQLYADGF
NRDRFLPAITEIKQHMQVVAVNGAEDHRLHPGAIEQRYWVALPEQGSALSQVFDALAAGQTVSAEPVPVGYRALSVVQAS
DSVLWCRYADLCEQPFAAMDFIALCDTYRAILLSEVPNLSAKKREGRIARGTEDGAERVVAGDRELPQLSVHDDGVRRFI
ALVDECYDRKVPLYIEAEVPMDALYTEGYLEFPFRRTLSRLQEMQLQRFAES

Sequences:

>Translated_372_residues
MTFDSPLSAWQYAVDHKGFIQDEAQEHAVWALQKCHEALHAGARSVTGVYLWGPVGRGKTWLMDQFHQSLRVPARRQHFH
HFMGWVHQRSFQLTGIADPLRALARELAAEVRVLCFDELFVNDIGDAIILGRLFQVMFEEGVVVVCTSNLPPDQLYADGF
NRDRFLPAITEIKQHMQVVAVNGAEDHRLHPGAIEQRYWVALPEQGSALSQVFDALAAGQTVSAEPVPVGYRALSVVQAS
DSVLWCRYADLCEQPFAAMDFIALCDTYRAILLSEVPNLSAKKREGRIARGTEDGAERVVAGDRELPQLSVHDDGVRRFI
ALVDECYDRKVPLYIEAEVPMDALYTEGYLEFPFRRTLSRLQEMQLQRFAES
>Mature_371_residues
TFDSPLSAWQYAVDHKGFIQDEAQEHAVWALQKCHEALHAGARSVTGVYLWGPVGRGKTWLMDQFHQSLRVPARRQHFHH
FMGWVHQRSFQLTGIADPLRALARELAAEVRVLCFDELFVNDIGDAIILGRLFQVMFEEGVVVVCTSNLPPDQLYADGFN
RDRFLPAITEIKQHMQVVAVNGAEDHRLHPGAIEQRYWVALPEQGSALSQVFDALAAGQTVSAEPVPVGYRALSVVQASD
SVLWCRYADLCEQPFAAMDFIALCDTYRAILLSEVPNLSAKKREGRIARGTEDGAERVVAGDRELPQLSVHDDGVRRFIA
LVDECYDRKVPLYIEAEVPMDALYTEGYLEFPFRRTLSRLQEMQLQRFAES

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=428, Percent_Identity=28.7383177570093, Blast_Score=181, Evalue=7e-46,
Organism=Escherichia coli, GI1789627, Length=328, Percent_Identity=38.719512195122, Blast_Score=226, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17505769, Length=369, Percent_Identity=26.8292682926829, Blast_Score=146, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6320783, Length=343, Percent_Identity=29.4460641399417, Blast_Score=139, Evalue=6e-34,
Organism=Drosophila melanogaster, GI20129913, Length=381, Percent_Identity=27.8215223097113, Blast_Score=146, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42029; Mature: 41898

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDSPLSAWQYAVDHKGFIQDEAQEHAVWALQKCHEALHAGARSVTGVYLWGPVGRGKT
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEEECCCCCCCH
WLMDQFHQSLRVPARRQHFHHFMGWVHQRSFQLTGIADPLRALARELAAEVRVLCFDELF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VNDIGDAIILGRLFQVMFEEGVVVVCTSNLPPDQLYADGFNRDRFLPAITEIKQHMQVVA
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHEEEE
VNGAEDHRLHPGAIEQRYWVALPEQGSALSQVFDALAAGQTVSAEPVPVGYRALSVVQAS
ECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
DSVLWCRYADLCEQPFAAMDFIALCDTYRAILLSEVPNLSAKKREGRIARGTEDGAERVV
CCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHH
AGDRELPQLSVHDDGVRRFIALVDECYDRKVPLYIEAEVPMDALYTEGYLEFPFRRTLSR
CCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCHHHHHHH
LQEMQLQRFAES
HHHHHHHHHHCC
>Mature Secondary Structure 
TFDSPLSAWQYAVDHKGFIQDEAQEHAVWALQKCHEALHAGARSVTGVYLWGPVGRGKT
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEEECCCCCCCH
WLMDQFHQSLRVPARRQHFHHFMGWVHQRSFQLTGIADPLRALARELAAEVRVLCFDELF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VNDIGDAIILGRLFQVMFEEGVVVVCTSNLPPDQLYADGFNRDRFLPAITEIKQHMQVVA
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHEEEE
VNGAEDHRLHPGAIEQRYWVALPEQGSALSQVFDALAAGQTVSAEPVPVGYRALSVVQAS
ECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
DSVLWCRYADLCEQPFAAMDFIALCDTYRAILLSEVPNLSAKKREGRIARGTEDGAERVV
CCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHH
AGDRELPQLSVHDDGVRRFIALVDECYDRKVPLYIEAEVPMDALYTEGYLEFPFRRTLSR
CCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCHHHHHHH
LQEMQLQRFAES
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]