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The map label for this gene is yccA [C]

Identifier: 77458712

GI number: 77458712

Start: 2845715

End: 2846386

Strand: Direct

Name: yccA [C]

Synonym: Pfl01_2487

Alternate gene names: 77458712

Gene position: 2845715-2846386 (Clockwise)

Preceding gene: 77458710

Following gene: 77458715

Centisome position: 44.2

GC content: 59.23

Gene sequence:

>672_bases
ATGCGCGAACAGGATTACGCAGTTCACAACAGCGTGCAGGCTGAGCAGCTAGAGGTTAGCCGCGTCCTGCGCAACACTTA
CGGTCTACTGGCGCTCACCCTCGCATTCAGCGGTGTGATGGCGTTCGTGGCCCAGCAGATGCGGGTCGGCTACCCGAACA
TTTTCGTGGTACTGATCGGTTTTTACGGGCTGTTCTTCCTCACCAACAAGCTTCGTGACTCTGCCTGGGGCCTGGTGTCG
GCGTTTGCCCTGACCGGTTTCATGGGTTTCCTCCTCGGCCCGATCCTCAACCGTTACCTGGGCATGCAGGGCGGCGCTGA
AGTGGTCAGCTCCGCGTTTGCGATGACTGCACTGGTGTTCGGTGGTCTGTCGGCCTACGTGCTGATCACCCGTAAGGACA
TGAGCTTCCTCGGTGGCTTCATCACCGCCGGTTTCTTCGTCCTGCTGGGCGCGACGCTGGCGAGCATGTTCTTCCAGATC
AGCGGCCTGCAACTGGCGATCAGCGCAGGTTTCGTGCTGTTCTCGTCGGTCTGCATCCTGTTCCAGACCAGCGCCATCAT
CCACGGCGGCGAGCGCAACTACATCATGGCGACCATCAGCCTGTATGTATCGATCTACAACCTGTTCGTCAGCCTGTTGC
AGATCTTCGGCATCATGAGCCGCGACGACTGA

Upstream 100 bases:

>100_bases
ACCTGAATGAAACACACTGTCAAACTCTGTGCATGGCTTGTTACAGAGCGTCTGTTATGATCTTTGCGACTGAACGTTTC
AAACCAACAGGAGTGTCGCC

Downstream 100 bases:

>100_bases
TCGCTTTACCGCTACAAACAAGAAACCCGCGAAAGCGGGTTTTTTGTTGCCTGCGATAAAGAGAGCAGACGATCAATTGA
TCTCGATGCTGCCATCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MREQDYAVHNSVQAEQLEVSRVLRNTYGLLALTLAFSGVMAFVAQQMRVGYPNIFVVLIGFYGLFFLTNKLRDSAWGLVS
AFALTGFMGFLLGPILNRYLGMQGGAEVVSSAFAMTALVFGGLSAYVLITRKDMSFLGGFITAGFFVLLGATLASMFFQI
SGLQLAISAGFVLFSSVCILFQTSAIIHGGERNYIMATISLYVSIYNLFVSLLQIFGIMSRDD

Sequences:

>Translated_223_residues
MREQDYAVHNSVQAEQLEVSRVLRNTYGLLALTLAFSGVMAFVAQQMRVGYPNIFVVLIGFYGLFFLTNKLRDSAWGLVS
AFALTGFMGFLLGPILNRYLGMQGGAEVVSSAFAMTALVFGGLSAYVLITRKDMSFLGGFITAGFFVLLGATLASMFFQI
SGLQLAISAGFVLFSSVCILFQTSAIIHGGERNYIMATISLYVSIYNLFVSLLQIFGIMSRDD
>Mature_223_residues
MREQDYAVHNSVQAEQLEVSRVLRNTYGLLALTLAFSGVMAFVAQQMRVGYPNIFVVLIGFYGLFFLTNKLRDSAWGLVS
AFALTGFMGFLLGPILNRYLGMQGGAEVVSSAFAMTALVFGGLSAYVLITRKDMSFLGGFITAGFFVLLGATLASMFFQI
SGLQLAISAGFVLFSSVCILFQTSAIIHGGERNYIMATISLYVSIYNLFVSLLQIFGIMSRDD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=210, Percent_Identity=55.2380952380952, Blast_Score=213, Evalue=7e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24317; Mature: 24317

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS01243 BI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREQDYAVHNSVQAEQLEVSRVLRNTYGLLALTLAFSGVMAFVAQQMRVGYPNIFVVLIG
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FYGLFFLTNKLRDSAWGLVSAFALTGFMGFLLGPILNRYLGMQGGAEVVSSAFAMTALVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GGLSAYVLITRKDMSFLGGFITAGFFVLLGATLASMFFQISGLQLAISAGFVLFSSVCIL
HCHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FQTSAIIHGGERNYIMATISLYVSIYNLFVSLLQIFGIMSRDD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MREQDYAVHNSVQAEQLEVSRVLRNTYGLLALTLAFSGVMAFVAQQMRVGYPNIFVVLIG
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FYGLFFLTNKLRDSAWGLVSAFALTGFMGFLLGPILNRYLGMQGGAEVVSSAFAMTALVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GGLSAYVLITRKDMSFLGGFITAGFFVLLGATLASMFFQISGLQLAISAGFVLFSSVCIL
HCHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FQTSAIIHGGERNYIMATISLYVSIYNLFVSLLQIFGIMSRDD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8469112; 10984043 [H]