| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is acrR [C]
Identifier: 77458705
GI number: 77458705
Start: 2835316
End: 2835912
Strand: Direct
Name: acrR [C]
Synonym: Pfl01_2480
Alternate gene names: 77458705
Gene position: 2835316-2835912 (Clockwise)
Preceding gene: 77458700
Following gene: 77458706
Centisome position: 44.04
GC content: 59.8
Gene sequence:
>597_bases GTGAGAGTGACCAAGGCCCAGGCACAGGCCAATCGAGAACACATCGTTGAAACAGCCTCAGAGCTGTTCCGTGAGCGTGG CTTTGATGGCGTCGGTGTGGCCGATCTCATGGCGGCTGCCGGTTTCACCCATGGAGGCTTCTACAAGCACTTCGGCTCGA AGGCCGACCTGATGGCCGAAGCCTCGGCCTGCAGTCTTGGCAAATCGTTGACCGGCGCCCAGGCGCTCGACGTACCAGGT TTCATCAACGTCTACGTGAACAGAGAACATCGCGACGGACGCGGCAGCGGTTGCACGATGGCCGCACTGTGTGGCGACGC GGCGCGTCAGTCGGACGATGTGAAGGCAACGTTTGCCGCAGGCATTGAACAGATCCTGCAAACCCTGGCGGAAAAATATC CTGTGGGCACGGATGCCGCAGAGGGCGAGGGGAGAAAGAAAATGATCGACCTGCTGTCGCGGGCGGTCGGCGCGATCGTC CTGTCACGCGCTTGCCCGGATGATTCGGCATTGGCGGACGAAATTCTTGAGGTTTGCCGCGCTGAAATGTTTGCTTCATT ACCGGTGCTGCCGGTCGATCAAGTGGAAACACCGTAG
Upstream 100 bases:
>100_bases AGGATGATGATCGAAATCTAAGCTGTCAACTGTTTTGATTATGGCCAACATCTATGTATCATCGAGCGCAGAAAATCCCG CTTAACACGAGGTATTGCAC
Downstream 100 bases:
>100_bases AAGGGCCGATCCGCCCTTCGCGATGACTTGAACGTCAGCCTGTTATCAGCCGATCAGCCGGCTTTTCGTGACCATGTACT CTGTTGGTCACGATTTGTAA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein; HTH-Type Transcriptional Regulator; TetR Family Regulator; Transcription Regulator Protein; TetR Family Transcription Regulatory Protein; Transcriptional Regulatory Protein TetR Family; TetR/AcrR Family Transcriptional Regulator; Orf_Bo
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRVTKAQAQANREHIVETASELFRERGFDGVGVADLMAAAGFTHGGFYKHFGSKADLMAEASACSLGKSLTGAQALDVPG FINVYVNREHRDGRGSGCTMAALCGDAARQSDDVKATFAAGIEQILQTLAEKYPVGTDAAEGEGRKKMIDLLSRAVGAIV LSRACPDDSALADEILEVCRAEMFASLPVLPVDQVETP
Sequences:
>Translated_198_residues MRVTKAQAQANREHIVETASELFRERGFDGVGVADLMAAAGFTHGGFYKHFGSKADLMAEASACSLGKSLTGAQALDVPG FINVYVNREHRDGRGSGCTMAALCGDAARQSDDVKATFAAGIEQILQTLAEKYPVGTDAAEGEGRKKMIDLLSRAVGAIV LSRACPDDSALADEILEVCRAEMFASLPVLPVDQVETP >Mature_198_residues MRVTKAQAQANREHIVETASELFRERGFDGVGVADLMAAAGFTHGGFYKHFGSKADLMAEASACSLGKSLTGAQALDVPG FINVYVNREHRDGRGSGCTMAALCGDAARQSDDVKATFAAGIEQILQTLAEKYPVGTDAAEGEGRKKMIDLLSRAVGAIV LSRACPDDSALADEILEVCRAEMFASLPVLPVDQVETP
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20922; Mature: 20922
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTKAQAQANREHIVETASELFRERGFDGVGVADLMAAAGFTHGGFYKHFGSKADLMAE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHH ASACSLGKSLTGAQALDVPGFINVYVNREHRDGRGSGCTMAALCGDAARQSDDVKATFAA HHHHHHCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH GIEQILQTLAEKYPVGTDAAEGEGRKKMIDLLSRAVGAIVLSRACPDDSALADEILEVCR HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AEMFASLPVLPVDQVETP HHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRVTKAQAQANREHIVETASELFRERGFDGVGVADLMAAAGFTHGGFYKHFGSKADLMAE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHH ASACSLGKSLTGAQALDVPGFINVYVNREHRDGRGSGCTMAALCGDAARQSDDVKATFAA HHHHHHCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH GIEQILQTLAEKYPVGTDAAEGEGRKKMIDLLSRAVGAIVLSRACPDDSALADEILEVCR HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AEMFASLPVLPVDQVETP HHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA