| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457641
Identifier: 77457641
GI number: 77457641
Start: 1584363
End: 1585301
Strand: Direct
Name: 77457641
Synonym: Pfl01_1414
Alternate gene names: NA
Gene position: 1584363-1585301 (Clockwise)
Preceding gene: 77457640
Following gene: 77457643
Centisome position: 24.61
GC content: 58.47
Gene sequence:
>939_bases ATGACCTTTTCGTTAGCCGCCAAGGTGTCGGTGTTGCTGCTGTTTGTGGGCAGCATCCTCTACGTGCATTTGCGCGGCAA GGCGCGTTTGCCGGTGCTGCGGCAGTTCGTCAACCACTCGGCGCTGTTCGCCCCGTATAACGCCTTGATGTACCTGTTCT CGGGCGTGCCGTCCAAGCCGTATCTGGATCGCAGCAAGTTTCCGGAACTGGACGTTCTGCGCGATAACTGGGAAACCATT CGTGACGAAGCCATGCACCTGTTCGACGAGGGTTATATTCGCGCCGCCGAGAAAAACAACGACGCCGGTTTCGGCTCGTT CTTCAAGAAAGGCTGGAAGCGTTTCTACCTCAAGTGGTACGACAAACCGCTGCCTTCGGCCGAAACTCTGTGCCCGAAAA CCGTGGCGTTGGTCAGTGCCATTCCCAACGTCAAAGGCGCGATGTTCGCGCTGTTGCCGGGTGGCAGTCATTTGAACCCG CACCGCGATCCGTTCGCCGGTTCCCTACGTTATCACCTGGGCCTTTCGACGCCGAACTCCGACGACTGCCGGATTTTTGT CGACGGTCAGGTCTACGCCTGGCGCGACGGTGAAGACGTGATGTTCGACGAGACCTACGTGCACTGGGTTAAAAACGAAA CCGAACAAACCCGCGTCATCCTGTTCTGCGACATCGAGCGGCCGTTGAGCAACCGCCTGATGACCCGCATCAACCGCTTC ATCAGCGCCTGGCTGGGCCGTGCCACGGCACCGCAGAACCTCGACGACGAACGTGTTGGCGGGATCAACCAGGCTTATGC GTGGAGCAAGAACTTCAGCGACAAGTTCAGTGGTGCGGTCAAACAGTGGAAACGCCGCAATCCGAAGGCCTACCGCGTAA TGCGGCCGGTGCTGGCGGTGGTGGTGTTGACGTTGCTGGGGTATTGGCTATTTGGTTGA
Upstream 100 bases:
>100_bases TCGGGCGGGTTTTTCCCGGAGCCGGTAGTGTTTATCATGGCCGGCCGCCATCTCGGGCAAATGACATGGCGTGGCGTTGT CTTATTTCAAGGAGTTGTTG
Downstream 100 bases:
>100_bases GGCTGGATTTAAAAGCATAAAAAACCGCTCTTTTGAGCGGTTTTTTATGCGGGGAAGGTAAAGGATGCGCCGGCGAGAAC ACCTCCCGGCTCCTCCGCTG
Product: aspartyl/asparaginyl beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Peptide-Aspartate Beta-Dioxygenase; Lipid A-Myristate Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTFSLAAKVSVLLLFVGSILYVHLRGKARLPVLRQFVNHSALFAPYNALMYLFSGVPSKPYLDRSKFPELDVLRDNWETI RDEAMHLFDEGYIRAAEKNNDAGFGSFFKKGWKRFYLKWYDKPLPSAETLCPKTVALVSAIPNVKGAMFALLPGGSHLNP HRDPFAGSLRYHLGLSTPNSDDCRIFVDGQVYAWRDGEDVMFDETYVHWVKNETEQTRVILFCDIERPLSNRLMTRINRF ISAWLGRATAPQNLDDERVGGINQAYAWSKNFSDKFSGAVKQWKRRNPKAYRVMRPVLAVVVLTLLGYWLFG
Sequences:
>Translated_312_residues MTFSLAAKVSVLLLFVGSILYVHLRGKARLPVLRQFVNHSALFAPYNALMYLFSGVPSKPYLDRSKFPELDVLRDNWETI RDEAMHLFDEGYIRAAEKNNDAGFGSFFKKGWKRFYLKWYDKPLPSAETLCPKTVALVSAIPNVKGAMFALLPGGSHLNP HRDPFAGSLRYHLGLSTPNSDDCRIFVDGQVYAWRDGEDVMFDETYVHWVKNETEQTRVILFCDIERPLSNRLMTRINRF ISAWLGRATAPQNLDDERVGGINQAYAWSKNFSDKFSGAVKQWKRRNPKAYRVMRPVLAVVVLTLLGYWLFG >Mature_311_residues TFSLAAKVSVLLLFVGSILYVHLRGKARLPVLRQFVNHSALFAPYNALMYLFSGVPSKPYLDRSKFPELDVLRDNWETIR DEAMHLFDEGYIRAAEKNNDAGFGSFFKKGWKRFYLKWYDKPLPSAETLCPKTVALVSAIPNVKGAMFALLPGGSHLNPH RDPFAGSLRYHLGLSTPNSDDCRIFVDGQVYAWRDGEDVMFDETYVHWVKNETEQTRVILFCDIERPLSNRLMTRINRFI SAWLGRATAPQNLDDERVGGINQAYAWSKNFSDKFSGAVKQWKRRNPKAYRVMRPVLAVVVLTLLGYWLFG
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI258613943, Length=190, Percent_Identity=26.8421052631579, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI14589866, Length=190, Percent_Identity=26.8421052631579, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24654024, Length=167, Percent_Identity=27.5449101796407, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35755; Mature: 35623
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSLAAKVSVLLLFVGSILYVHLRGKARLPVLRQFVNHSALFAPYNALMYLFSGVPSKP CCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC YLDRSKFPELDVLRDNWETIRDEAMHLFDEGYIRAAEKNNDAGFGSFFKKGWKRFYLKWY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH DKPLPSAETLCPKTVALVSAIPNVKGAMFALLPGGSHLNPHRDPFAGSLRYHLGLSTPNS CCCCCCHHHHCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC DDCRIFVDGQVYAWRDGEDVMFDETYVHWVKNETEQTRVILFCDIERPLSNRLMTRINRF CCCEEEECCEEEEEECCCCEEECHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHH ISAWLGRATAPQNLDDERVGGINQAYAWSKNFSDKFSGAVKQWKRRNPKAYRVMRPVLAV HHHHHCCCCCCCCCCHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH VVLTLLGYWLFG HHHHHHHHHHCC >Mature Secondary Structure TFSLAAKVSVLLLFVGSILYVHLRGKARLPVLRQFVNHSALFAPYNALMYLFSGVPSKP CCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC YLDRSKFPELDVLRDNWETIRDEAMHLFDEGYIRAAEKNNDAGFGSFFKKGWKRFYLKWY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH DKPLPSAETLCPKTVALVSAIPNVKGAMFALLPGGSHLNPHRDPFAGSLRYHLGLSTPNS CCCCCCHHHHCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC DDCRIFVDGQVYAWRDGEDVMFDETYVHWVKNETEQTRVILFCDIERPLSNRLMTRINRF CCCEEEECCEEEEEECCCCEEECHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHH ISAWLGRATAPQNLDDERVGGINQAYAWSKNFSDKFSGAVKQWKRRNPKAYRVMRPVLAV HHHHHCCCCCCCCCCHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH VVLTLLGYWLFG HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA