| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mmlH [H]
Identifier: 77457631
GI number: 77457631
Start: 1575295
End: 1576581
Strand: Direct
Name: mmlH [H]
Synonym: Pfl01_1404
Alternate gene names: 77457631
Gene position: 1575295-1576581 (Clockwise)
Preceding gene: 77457629
Following gene: 77457632
Centisome position: 24.47
GC content: 61.46
Gene sequence:
>1287_bases ATGAGTGCGCCCGACACCCTCGACCTCCCCAAGACTGCGGCCCGTCTCGGCCCGTTCGACTGGTATCGCAACATCAATCA GCAGGAGCGCCGGACCTTCTGGAGCTGCAAGATCGGCTACGGTCTGGACGGCATGGACACCCAGATGCTCAGCTTCGTGG TGCCGACCCTGATCGCAATGTGGGGCATCACCACCGGCGAAGCCGGCCTGATCCACACCAGCACCCTGATCGCTTCGGCC ATCGGCGGTTGGGTGGCGGGAATTCTCTCCGACCGCATCGGCCGCGTGCGCACCCTGCAACTGACGGTGCTGTGGTTTGC CTTCTTCACTTTCCTTTGCGGCTTTGCCCAGAACTACGAACAGCTGTTGATTGCCCGCACCTTGATGGGCTTCGGTTTCG GCGGTGAATGGACCGCCGGTGCGGTGCTGATCGGTGAAGTGATCCGGGCCAAGGACCGCGGCAAGGCGGTGGGCATGGTG CAATCCGGCTGGGCCTTGGGTTGGGGCCTGACGGCGATTCTGTATGCGCTGCTGTTTTCGGTGCTGCCACCGGAAGACGC CTGGCGCGCACTGTTCATCCTTGGCATCGTGCCGGCGGTGTTCGTGATTTTCGTCCGCCGTCTGGTGAAAGATCCGGAGA TCTACCGCGAAGCCAAGGCCAGACAAACCCCGGAAAGCCCTTCGAAGTTCTACGAGATTTTCGCCCCCGGCATGCTCTTC ACCACGATTCGTGCCTCGCTGCTGACCACCGGCGCCCTCGGCGGTTATTACGCGATTACCTCCTGGCTGCCGACTTTTCT GAAAAACGAACGCGGTTTGAGCGTACTCGGCACCGGCGGTTATCTGGCGATGGTGATCATCGGTTCCTACGCCGGTTATG TGATCAGCGCCTATTTGACCGACCTGTTGGGCCGCAAGAAGAACTTCATCCTGTTCGCCGTCGGCTCGTTCACCATCGTT CTGCTCTACACCCAATTGCCGGTCAGCAACGGCGTGATGCTGTGGCTGGGTTTCCCGCTGGGCTTTTTCGCCTCGGGGAT TTTCAGTGGGATGGGCGCGTTTCTCACCGAGTTGTTTCCAACCCGGATTCGTGGCTCGGGGCAGGGCTTCTGCTACAACA TCGGTCGGGCGCTGGCGGCTTTGTTCCCGCTGCTGATCGGCCTGCTCAGTCAGAAGGTGCCACTGAGCGTAGGCATCGGT GCCTTTGCGGCGGTGTCCTACGGGGTGGTGATCCTCGCGGCGTTGAGCCTGCCGGAAACCCGTGGCAAGCAACTGGACGC GCAGTAA
Upstream 100 bases:
>100_bases CGCGACCGGGTGACGCACCCAAGAATCGACGCATCCGGTTCCCACGATAGGCGTCGTCGGAGCTTCGAACAAGACCAATA AAAGCCTGCGGAGACATGCC
Downstream 100 bases:
>100_bases CTGATAACCTGCGACAACGCCCTACGATAAAAAAAGACAAAAGCTACAGGAGTGTTCACCATGAGCCGCCTGCTATTGAA CTGTGACATCGGCGAGAGCT
Product: general substrate transporter
Products: Proton [Cytoplasm]; N-acetylneuraminate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSAPDTLDLPKTAARLGPFDWYRNINQQERRTFWSCKIGYGLDGMDTQMLSFVVPTLIAMWGITTGEAGLIHTSTLIASA IGGWVAGILSDRIGRVRTLQLTVLWFAFFTFLCGFAQNYEQLLIARTLMGFGFGGEWTAGAVLIGEVIRAKDRGKAVGMV QSGWALGWGLTAILYALLFSVLPPEDAWRALFILGIVPAVFVIFVRRLVKDPEIYREAKARQTPESPSKFYEIFAPGMLF TTIRASLLTTGALGGYYAITSWLPTFLKNERGLSVLGTGGYLAMVIIGSYAGYVISAYLTDLLGRKKNFILFAVGSFTIV LLYTQLPVSNGVMLWLGFPLGFFASGIFSGMGAFLTELFPTRIRGSGQGFCYNIGRALAALFPLLIGLLSQKVPLSVGIG AFAAVSYGVVILAALSLPETRGKQLDAQ
Sequences:
>Translated_428_residues MSAPDTLDLPKTAARLGPFDWYRNINQQERRTFWSCKIGYGLDGMDTQMLSFVVPTLIAMWGITTGEAGLIHTSTLIASA IGGWVAGILSDRIGRVRTLQLTVLWFAFFTFLCGFAQNYEQLLIARTLMGFGFGGEWTAGAVLIGEVIRAKDRGKAVGMV QSGWALGWGLTAILYALLFSVLPPEDAWRALFILGIVPAVFVIFVRRLVKDPEIYREAKARQTPESPSKFYEIFAPGMLF TTIRASLLTTGALGGYYAITSWLPTFLKNERGLSVLGTGGYLAMVIIGSYAGYVISAYLTDLLGRKKNFILFAVGSFTIV LLYTQLPVSNGVMLWLGFPLGFFASGIFSGMGAFLTELFPTRIRGSGQGFCYNIGRALAALFPLLIGLLSQKVPLSVGIG AFAAVSYGVVILAALSLPETRGKQLDAQ >Mature_427_residues SAPDTLDLPKTAARLGPFDWYRNINQQERRTFWSCKIGYGLDGMDTQMLSFVVPTLIAMWGITTGEAGLIHTSTLIASAI GGWVAGILSDRIGRVRTLQLTVLWFAFFTFLCGFAQNYEQLLIARTLMGFGFGGEWTAGAVLIGEVIRAKDRGKAVGMVQ SGWALGWGLTAILYALLFSVLPPEDAWRALFILGIVPAVFVIFVRRLVKDPEIYREAKARQTPESPSKFYEIFAPGMLFT TIRASLLTTGALGGYYAITSWLPTFLKNERGLSVLGTGGYLAMVIIGSYAGYVISAYLTDLLGRKKNFILFAVGSFTIVL LYTQLPVSNGVMLWLGFPLGFFASGIFSGMGAFLTELFPTRIRGSGQGFCYNIGRALAALFPLLIGLLSQKVPLSVGIGA FAAVSYGVVILAALSLPETRGKQLDAQ
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=437, Percent_Identity=25.858123569794, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI213021148, Length=440, Percent_Identity=22.2727272727273, Blast_Score=76, Evalue=7e-14, Organism=Escherichia coli, GI87082231, Length=454, Percent_Identity=25.7709251101322, Blast_Score=141, Evalue=7e-35, Organism=Escherichia coli, GI87082404, Length=356, Percent_Identity=26.685393258427, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI87081723, Length=372, Percent_Identity=26.0752688172043, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1790550, Length=328, Percent_Identity=22.8658536585366, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI87082159, Length=366, Percent_Identity=25.6830601092896, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32564663, Length=433, Percent_Identity=25.635103926097, Blast_Score=93, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46484; Mature: 46353
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPDTLDLPKTAARLGPFDWYRNINQQERRTFWSCKIGYGLDGMDTQMLSFVVPTLIAM CCCCCCCCCCHHHHHCCCHHHHHCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHH WGITTGEAGLIHTSTLIASAIGGWVAGILSDRIGRVRTLQLTVLWFAFFTFLCGFAQNYE HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLLIARTLMGFGFGGEWTAGAVLIGEVIRAKDRGKAVGMVQSGWALGWGLTAILYALLFS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCHHCCCHHHHHHHHHHHHHHHH VLPPEDAWRALFILGIVPAVFVIFVRRLVKDPEIYREAKARQTPESPSKFYEIFAPGMLF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHH TTIRASLLTTGALGGYYAITSWLPTFLKNERGLSVLGTGGYLAMVIIGSYAGYVISAYLT HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH DLLGRKKNFILFAVGSFTIVLLYTQLPVSNGVMLWLGFPLGFFASGIFSGMGAFLTELFP HHHCCCCCEEEEEEHHHEEHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH TRIRGSGQGFCYNIGRALAALFPLLIGLLSQKVPLSVGIGAFAAVSYGVVILAALSLPET HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHCCCCC RGKQLDAQ CCCCCCCC >Mature Secondary Structure SAPDTLDLPKTAARLGPFDWYRNINQQERRTFWSCKIGYGLDGMDTQMLSFVVPTLIAM CCCCCCCCCHHHHHCCCHHHHHCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHH WGITTGEAGLIHTSTLIASAIGGWVAGILSDRIGRVRTLQLTVLWFAFFTFLCGFAQNYE HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLLIARTLMGFGFGGEWTAGAVLIGEVIRAKDRGKAVGMVQSGWALGWGLTAILYALLFS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCHHCCCHHHHHHHHHHHHHHHH VLPPEDAWRALFILGIVPAVFVIFVRRLVKDPEIYREAKARQTPESPSKFYEIFAPGMLF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHH TTIRASLLTTGALGGYYAITSWLPTFLKNERGLSVLGTGGYLAMVIIGSYAGYVISAYLT HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH DLLGRKKNFILFAVGSFTIVLLYTQLPVSNGVMLWLGFPLGFFASGIFSGMGAFLTELFP HHHCCCCCEEEEEEHHHEEHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH TRIRGSGQGFCYNIGRALAALFPLLIGLLSQKVPLSVGIGAFAAVSYGVVILAALSLPET HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHCCCCC RGKQLDAQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; N-acetylneuraminate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + N-acetylneuraminate [Periplasm] = Proton [Cytoplasm] + N-acetylneuraminate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]