| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457620
Identifier: 77457620
GI number: 77457620
Start: 1565889
End: 1567118
Strand: Direct
Name: 77457620
Synonym: Pfl01_1393
Alternate gene names: NA
Gene position: 1565889-1567118 (Clockwise)
Preceding gene: 77457619
Following gene: 77457627
Centisome position: 24.32
GC content: 64.15
Gene sequence:
>1230_bases ATGGCGACGGGATTGCGCCGGGCGCTGATCGTCACGCTGCTGGCGCTGAGCGCGCCGGTGTGGGCGGCGAAGAAAGTCGA TCTGGATTATCAGGTACGCCTGCTGCCGCAGAGCGATCAGGCCGAAGTGCGCCTGACCCTTGCCAAGGGCGAAGAGGTGC GCAGCCTGGATTTTGATCTTGGCGATGGCAGCCACTACAGCGACTTCAAGGCCGACGGCCAGTGGCAACTGACACCGGGC AAACCGGCGCGCGGGGTGTGGCGCCCGACGGCGGACAAGGCCAGCCTGACCTATCGCGTGCGCATCAGCCACGGCCGCAA GAACGGCAGCTTCGACACGCGCATGACCCCGACCTGGGCGTTGATGCGCGGCGATGAACTGGTGCCGCCGGCCAGGCTTG ATCAGCAGGACGGTATCGAACTGGTCGCGCGCCTGCACTTCGAATTGCCCGACGGCTGGAAAAGCGTCGAAACCGCCTGG CCGCGCATCGGCAAGAACAAATTCCGTATCGACAATCCGTCACGCCTGTTCGACCGCCCGACCGGCTGGATGCTCGCCGG CCACCTCGGCAGTCGCCGCACCCGACTGGGGGAAACCGAAGTCACCGTGGCGTCGCCGCAAGGTCAGGGCATGCGCCGTA TGGATGTGCTGACGCTGCTGACGTTTGTCTGGCCGCAGGTGCAGGCGGTGTTTCCCCGCCATCCGAGCAAACTGCTGATC GTCGGCGCCAATGACCCGATGTGGCGCGGCAGTCTGGCGGCGCGGGAGTCGATCTACCTCAACACGCGGTTGCCGCTGGT CAGCGAAAGCGGCAGCAGCGCCCTGGTGCGCGAGCTGGCGCAGGTGTTCGGGCGGATCAACGACGAGCAGCGCAGCGACT GGATCAGCGAAGGGTTTGCCGAGTATTACGCCATCGAACTGGTGCGCCGTGCCGGCGGCATGAGTGACGAGCGTTATCAG AGCTTGCAGGCGAAACTTGCGAAGGACAGTCAGAAAGTCACGACCCTGCGCGGCGAGCAGATCAGCCCGGCGCAGCTGTC GAAAGCGGTGCTGTTGTTGCAGGAGCTGGACGGCGAGATTCGCCTGAAGACCCGAAACAAGCGGTCGTTGGATGACGTGC TGCGCGGGGCGATGCACTTGGTGACTGTCGATACAAAAGAATTTGTGCAACTCGCCGAAAGCATTCTCGGCGAGTCGTCC AAAGTCCTTGATACCGGGTTGCTCCGGTAG
Upstream 100 bases:
>100_bases CCCAGTCCGGGCGCATGCTCGCCGAAGGCAGCGTGCCGGAAGACGACTGGGAAGATCACCTGATTTTCCGCGCAGGTTAA CGATTGACCCAGGAGCAGGT
Downstream 100 bases:
>100_bases CGGTCAGCCCCCGGCTTTCGGCGATTTCACCGAGTCATTGCCGGTCACGGTGGCAGTGTTGGTCGCCGCCTCGGCATTGG CCTTGAGCTTGCTCAGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MATGLRRALIVTLLALSAPVWAAKKVDLDYQVRLLPQSDQAEVRLTLAKGEEVRSLDFDLGDGSHYSDFKADGQWQLTPG KPARGVWRPTADKASLTYRVRISHGRKNGSFDTRMTPTWALMRGDELVPPARLDQQDGIELVARLHFELPDGWKSVETAW PRIGKNKFRIDNPSRLFDRPTGWMLAGHLGSRRTRLGETEVTVASPQGQGMRRMDVLTLLTFVWPQVQAVFPRHPSKLLI VGANDPMWRGSLAARESIYLNTRLPLVSESGSSALVRELAQVFGRINDEQRSDWISEGFAEYYAIELVRRAGGMSDERYQ SLQAKLAKDSQKVTTLRGEQISPAQLSKAVLLLQELDGEIRLKTRNKRSLDDVLRGAMHLVTVDTKEFVQLAESILGESS KVLDTGLLR
Sequences:
>Translated_409_residues MATGLRRALIVTLLALSAPVWAAKKVDLDYQVRLLPQSDQAEVRLTLAKGEEVRSLDFDLGDGSHYSDFKADGQWQLTPG KPARGVWRPTADKASLTYRVRISHGRKNGSFDTRMTPTWALMRGDELVPPARLDQQDGIELVARLHFELPDGWKSVETAW PRIGKNKFRIDNPSRLFDRPTGWMLAGHLGSRRTRLGETEVTVASPQGQGMRRMDVLTLLTFVWPQVQAVFPRHPSKLLI VGANDPMWRGSLAARESIYLNTRLPLVSESGSSALVRELAQVFGRINDEQRSDWISEGFAEYYAIELVRRAGGMSDERYQ SLQAKLAKDSQKVTTLRGEQISPAQLSKAVLLLQELDGEIRLKTRNKRSLDDVLRGAMHLVTVDTKEFVQLAESILGESS KVLDTGLLR >Mature_408_residues ATGLRRALIVTLLALSAPVWAAKKVDLDYQVRLLPQSDQAEVRLTLAKGEEVRSLDFDLGDGSHYSDFKADGQWQLTPGK PARGVWRPTADKASLTYRVRISHGRKNGSFDTRMTPTWALMRGDELVPPARLDQQDGIELVARLHFELPDGWKSVETAWP RIGKNKFRIDNPSRLFDRPTGWMLAGHLGSRRTRLGETEVTVASPQGQGMRRMDVLTLLTFVWPQVQAVFPRHPSKLLIV GANDPMWRGSLAARESIYLNTRLPLVSESGSSALVRELAQVFGRINDEQRSDWISEGFAEYYAIELVRRAGGMSDERYQS LQAKLAKDSQKVTTLRGEQISPAQLSKAVLLLQELDGEIRLKTRNKRSLDDVLRGAMHLVTVDTKEFVQLAESILGESSK VLDTGLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45851; Mature: 45720
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGLRRALIVTLLALSAPVWAAKKVDLDYQVRLLPQSDQAEVRLTLAKGEEVRSLDFDL CCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEECCC GDGSHYSDFKADGQWQLTPGKPARGVWRPTADKASLTYRVRISHGRKNGSFDTRMTPTWA CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEE LMRGDELVPPARLDQQDGIELVARLHFELPDGWKSVETAWPRIGKNKFRIDNPSRLFDRP EECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCHHHHCCC TGWMLAGHLGSRRTRLGETEVTVASPQGQGMRRMDVLTLLTFVWPQVQAVFPRHPSKLLI CCEEEECCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VGANDPMWRGSLAARESIYLNTRLPLVSESGSSALVRELAQVFGRINDEQRSDWISEGFA ECCCCCCCCCCHHHCCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH EYYAIELVRRAGGMSDERYQSLQAKLAKDSQKVTTLRGEQISPAQLSKAVLLLQELDGEI HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHHHHHCCCCE RLKTRNKRSLDDVLRGAMHLVTVDTKEFVQLAESILGESSKVLDTGLLR EEEECCCCCHHHHHHHHEEEEEECHHHHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure ATGLRRALIVTLLALSAPVWAAKKVDLDYQVRLLPQSDQAEVRLTLAKGEEVRSLDFDL CCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEECCC GDGSHYSDFKADGQWQLTPGKPARGVWRPTADKASLTYRVRISHGRKNGSFDTRMTPTWA CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEE LMRGDELVPPARLDQQDGIELVARLHFELPDGWKSVETAWPRIGKNKFRIDNPSRLFDRP EECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCHHHHCCC TGWMLAGHLGSRRTRLGETEVTVASPQGQGMRRMDVLTLLTFVWPQVQAVFPRHPSKLLI CCEEEECCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VGANDPMWRGSLAARESIYLNTRLPLVSESGSSALVRELAQVFGRINDEQRSDWISEGFA ECCCCCCCCCCHHHCCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH EYYAIELVRRAGGMSDERYQSLQAKLAKDSQKVTTLRGEQISPAQLSKAVLLLQELDGEI HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHHHHHCCCCE RLKTRNKRSLDDVLRGAMHLVTVDTKEFVQLAESILGESSKVLDTGLLR EEEECCCCCHHHHHHHHEEEEEECHHHHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA