Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is ygcG [H]
Identifier: 77457526
GI number: 77457526
Start: 1475984
End: 1476736
Strand: Direct
Name: ygcG [H]
Synonym: Pfl01_1299
Alternate gene names: 77457526
Gene position: 1475984-1476736 (Clockwise)
Preceding gene: 77457525
Following gene: 77457527
Centisome position: 22.92
GC content: 64.28
Gene sequence:
>753_bases ATGCGTGTGTTGAAGATGGGCCTGGTGCTGATGCTGTGGCTGTTCACCGTCAGCGCCCGGGCCGAGTTGACTTTTCCGGC GCTGACCGGGCGGGTGGTGGACGAGGCGCAGATGATCGAGCCGTCAGTGCGCGCGCAACTGAGCCAGCAATTGCAGGCCC ACGAGCAGGCGACCGGCGAACAGTTGGTGGTGGTGACGTTGCCGAATCTGCAAGGCGCCCCCATCGAGGACTACGGCGTC GAACTCGGCCGGCACTGGGGCATCGGCCAGAAGGACAAAAACAACGGCGCGCTGTTGATCGTCGCCCGGGACGAGCGCAA ATTGCGCATCGAAGTCGGCTACGGGCTGGAGGATCGCCTGACCGATGCCCAGAGTTCGGTGATCATCCATCAGGTGATCA CACCGTCGTTCAAGGCCGGAAATTTCAGCAAGGGCATCAGCGACGGTGTGGCGGCGATGCTGGTGGTGCTGGGCGGCAAT CCGCTGGACGAACCGTCCACAGTGTATGAATCGGCTGGCGATCCCGCCGATGATTTCGTCTCGCGCCACCCGGCGTTGTT CGTATTTCTGGTGATGTTGTTCATCCTGACTGTTTTTGTCTGCCAGATGCTCGGTATCCTTCCCGCCGGCCGTGGCGGCT CCGGAGGAGGGGGCGGCTTTGGTGGCGGTGGTTTTGGCGGCGGCGGTGGAGGCGGGGGCTTCAGCGGCGGCGGTGGCAGT TTCGGTGGGGGCGGGTCCTCCGGCGGCTGGTGA
Upstream 100 bases:
>100_bases AGCGTGATGTATAGCGATCTGCCGATCCGCGAGACCTTCGAAGCCACCAGCCCCGGCGCGGACAAGGCCCCGGAAGTGAA GTTCTGAGCCGGGGATGCCC
Downstream 100 bases:
>100_bases TAACAATAATGAGCAGGCACTTCACGACATGGCATTACTGACTGAACACGAACAACGCAAGGTCGCCGAGGCCATCGCCC GGGTCGAGCGCGACACCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MRVLKMGLVLMLWLFTVSARAELTFPALTGRVVDEAQMIEPSVRAQLSQQLQAHEQATGEQLVVVTLPNLQGAPIEDYGV ELGRHWGIGQKDKNNGALLIVARDERKLRIEVGYGLEDRLTDAQSSVIIHQVITPSFKAGNFSKGISDGVAAMLVVLGGN PLDEPSTVYESAGDPADDFVSRHPALFVFLVMLFILTVFVCQMLGILPAGRGGSGGGGGFGGGGFGGGGGGGGFSGGGGS FGGGGSSGGW
Sequences:
>Translated_250_residues MRVLKMGLVLMLWLFTVSARAELTFPALTGRVVDEAQMIEPSVRAQLSQQLQAHEQATGEQLVVVTLPNLQGAPIEDYGV ELGRHWGIGQKDKNNGALLIVARDERKLRIEVGYGLEDRLTDAQSSVIIHQVITPSFKAGNFSKGISDGVAAMLVVLGGN PLDEPSTVYESAGDPADDFVSRHPALFVFLVMLFILTVFVCQMLGILPAGRGGSGGGGGFGGGGFGGGGGGGGFSGGGGS FGGGGSSGGW >Mature_250_residues MRVLKMGLVLMLWLFTVSARAELTFPALTGRVVDEAQMIEPSVRAQLSQQLQAHEQATGEQLVVVTLPNLQGAPIEDYGV ELGRHWGIGQKDKNNGALLIVARDERKLRIEVGYGLEDRLTDAQSSVIIHQVITPSFKAGNFSKGISDGVAAMLVVLGGN PLDEPSTVYESAGDPADDFVSRHPALFVFLVMLFILTVFVCQMLGILPAGRGGSGGGGGFGGGGFGGGGGGGGFSGGGGS FGGGGSSGGW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=150, Percent_Identity=29.3333333333333, Blast_Score=84, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 25833; Mature: 25833
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLKMGLVLMLWLFTVSARAELTFPALTGRVVDEAQMIEPSVRAQLSQQLQAHEQATGE CHHHHHHHHHHHHHHHHHCCCEEECHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC QLVVVTLPNLQGAPIEDYGVELGRHWGIGQKDKNNGALLIVARDERKLRIEVGYGLEDRL EEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCHHHH TDAQSSVIIHQVITPSFKAGNFSKGISDGVAAMLVVLGGNPLDEPSTVYESAGDPADDFV HHHHHHEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHH SRHPALFVFLVMLFILTVFVCQMLGILPAGRGGSGGGGGFGGGGFGGGGGGGGFSGGGGS HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGGGGSSGGW CCCCCCCCCC >Mature Secondary Structure MRVLKMGLVLMLWLFTVSARAELTFPALTGRVVDEAQMIEPSVRAQLSQQLQAHEQATGE CHHHHHHHHHHHHHHHHHCCCEEECHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC QLVVVTLPNLQGAPIEDYGVELGRHWGIGQKDKNNGALLIVARDERKLRIEVGYGLEDRL EEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCHHHH TDAQSSVIIHQVITPSFKAGNFSKGISDGVAAMLVVLGGNPLDEPSTVYESAGDPADDFV HHHHHHEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHH SRHPALFVFLVMLFILTVFVCQMLGILPAGRGGSGGGGGFGGGGFGGGGGGGGFSGGGGS HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGGGGSSGGW CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]