| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fpr [H]
Identifier: 77457412
GI number: 77457412
Start: 1353282
End: 1354061
Strand: Direct
Name: fpr [H]
Synonym: Pfl01_1185
Alternate gene names: 77457412
Gene position: 1353282-1354061 (Clockwise)
Preceding gene: 77457410
Following gene: 77457419
Centisome position: 21.02
GC content: 60.26
Gene sequence:
>780_bases ATGAGCAACATGAACCACGAGCGTGTCCTCAGTGTTCATCACTGGAACGACACTCTGTTCAGCTTCAAGTGCACCCGCGA TCCGGGCCTGCGCTTCGAGAACGGTCAGTTCGTGATGATCGGCCTGCAACAGCCAAACGGCCGCCCGCTTATGCGCGCTT ACTCGATCGCCAGCCCGAACTGGGAAGAGCATCTCGAGTTCTTCAGCATCAAGGTGCCGGACGGTCCGCTGACCTCCCAG TTGCAGCACCTGAAGGAAGGCGACGAGATCATCATCTCGAAAAAACCGACCGGCACCCTGGTGCTGGACGACCTGAACCC GGGCAAGCACCTGTACCTGCTGAGTACCGGCACCGGTCTGGCGCCGTTCATGAGCGTGATCCAGGACCCGGAAACCTACG AGCGCTTCGAGAAAGTGATCCTGGTTCACGGTGTTCGTTACGTCAACGAAGTCGCCTACCGCGAGTTCATCACCGAGCAC CTGCCGCAAAACGAGTTCTTCGGCGAAGCGCTGCGTGACAAGCTGATCTACTACCCGACCGTGACTCGCGAACCGTTCGA GAATCAGGGTCGCCTGACCGACCTGATGCGCAGCGGCAAGCTGTTCAGCGACATCGGCCTGCCACCGATCAACCCGCAGG ACGACCGCGCGATGATCTGCGGCAGCCCGAGCATGCTCGACGAGACCAGCGAAGTGCTCGACAGCTTCGGCCTGAAGATC TCGGCGCGGATGCGCGAGCCGGGTGACTACCTGATCGAGCGCGCATTCGTCGAGAAATAA
Upstream 100 bases:
>100_bases ATATTGTCGGCGCTATTAGAATGCGATGCAATTGCGCACCGTCGGCATTCTTCAACAAGAGCCGGGCAGGCGCAGATCAA TCTCCAGGAGTCCCACGTAC
Downstream 100 bases:
>100_bases TCCCGACGATGCCGATAGAAAAGCCCGCGTTGCCTGAGAAGGCAGCGCGGGCATTTTCGTTTTCGGGGTTCAGTCAGCGG CGGGGATGACTTCCAGGACG
Product: oxidoreductase FAD/NAD(P)-binding
Products: NA
Alternate protein names: FNR; Protein X [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSNMNHERVLSVHHWNDTLFSFKCTRDPGLRFENGQFVMIGLQQPNGRPLMRAYSIASPNWEEHLEFFSIKVPDGPLTSQ LQHLKEGDEIIISKKPTGTLVLDDLNPGKHLYLLSTGTGLAPFMSVIQDPETYERFEKVILVHGVRYVNEVAYREFITEH LPQNEFFGEALRDKLIYYPTVTREPFENQGRLTDLMRSGKLFSDIGLPPINPQDDRAMICGSPSMLDETSEVLDSFGLKI SARMREPGDYLIERAFVEK
Sequences:
>Translated_259_residues MSNMNHERVLSVHHWNDTLFSFKCTRDPGLRFENGQFVMIGLQQPNGRPLMRAYSIASPNWEEHLEFFSIKVPDGPLTSQ LQHLKEGDEIIISKKPTGTLVLDDLNPGKHLYLLSTGTGLAPFMSVIQDPETYERFEKVILVHGVRYVNEVAYREFITEH LPQNEFFGEALRDKLIYYPTVTREPFENQGRLTDLMRSGKLFSDIGLPPINPQDDRAMICGSPSMLDETSEVLDSFGLKI SARMREPGDYLIERAFVEK >Mature_258_residues SNMNHERVLSVHHWNDTLFSFKCTRDPGLRFENGQFVMIGLQQPNGRPLMRAYSIASPNWEEHLEFFSIKVPDGPLTSQL QHLKEGDEIIISKKPTGTLVLDDLNPGKHLYLLSTGTGLAPFMSVIQDPETYERFEKVILVHGVRYVNEVAYREFITEHL PQNEFFGEALRDKLIYYPTVTREPFENQGRLTDLMRSGKLFSDIGLPPINPQDDRAMICGSPSMLDETSEVLDSFGLKIS ARMREPGDYLIERAFVEK
Specific function: Transports Electrons Between Flavodoxin Or Ferredoxin And NADPH. Involved In The Reductive Activation Of Cobalamin- Independent Methionine Synthase, Pyruvate Formate Lyase And Anaerobic Ribonucleotide Reductase. Also Protects Against Superoxide Radicals
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790359, Length=255, Percent_Identity=33.3333333333333, Blast_Score=137, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017927 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 29664; Mature: 29533
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNMNHERVLSVHHWNDTLFSFKCTRDPGLRFENGQFVMIGLQQPNGRPLMRAYSIASPN CCCCCCHHEEEEEECCCEEEEEEECCCCCCEEECCCEEEEEEECCCCCCHHEEEECCCCC WEEHLEFFSIKVPDGPLTSQLQHLKEGDEIIISKKPTGTLVLDDLNPGKHLYLLSTGTGL HHHHCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCH APFMSVIQDPETYERFEKVILVHGVRYVNEVAYREFITEHLPQNEFFGEALRDKLIYYPT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECC VTREPFENQGRLTDLMRSGKLFSDIGLPPINPQDDRAMICGSPSMLDETSEVLDSFGLKI CCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCEE SARMREPGDYLIERAFVEK EEECCCCHHHHHHHHHHCC >Mature Secondary Structure SNMNHERVLSVHHWNDTLFSFKCTRDPGLRFENGQFVMIGLQQPNGRPLMRAYSIASPN CCCCCHHEEEEEECCCEEEEEEECCCCCCEEECCCEEEEEEECCCCCCHHEEEECCCCC WEEHLEFFSIKVPDGPLTSQLQHLKEGDEIIISKKPTGTLVLDDLNPGKHLYLLSTGTGL HHHHCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCH APFMSVIQDPETYERFEKVILVHGVRYVNEVAYREFITEHLPQNEFFGEALRDKLIYYPT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECC VTREPFENQGRLTDLMRSGKLFSDIGLPPINPQDDRAMICGSPSMLDETSEVLDSFGLKI CCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCEE SARMREPGDYLIERAFVEK EEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7673160; 8034707; 9865948 [H]