| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457405
Identifier: 77457405
GI number: 77457405
Start: 1348993
End: 1349256
Strand: Direct
Name: 77457405
Synonym: Pfl01_1178
Alternate gene names: NA
Gene position: 1348993-1349256 (Clockwise)
Preceding gene: 77457403
Following gene: 77457406
Centisome position: 20.95
GC content: 51.14
Gene sequence:
>264_bases ATGCAACTTCTCCTTCTGCACAGAGCTTTCGGCCCTGACGTGCGGCGTCAGTGCCGCGCTGCAAGAAAACAAACAGCCGG CAGCTCCTTTCCTGCCGTTAGAAAAATGAACGGGAATACGTTGAATCTAGACCCTCAAAGCATTTTTCGCTCATCGAGCA TTACGCCGCAAAGTCTTTCCTGGCAACTGCTTATTGCCGCTTTTCGAAGTGTTTTCACCGCTCGTCCGATGCCACGTCGA GGGCTGAATGCTCTGATTTACTAA
Upstream 100 bases:
>100_bases GTCGGGTGACACCAGGTTGAGTTGTTCTTCGACCTTGCTGATGAGGTCGTGGCCGCTTTCCTGAAAATGACGGCTGAGCA GGTCATTCGGTTGGTAAGGC
Downstream 100 bases:
>100_bases GTTAAAGGCGCCGTACGACAACTTTGCGTCAACGACCGTACGCAAGGTGCACGCTATTCAAGGATTTGCGGGTGGCAAGG AGGCGGGACACATGACCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MQLLLLHRAFGPDVRRQCRAARKQTAGSSFPAVRKMNGNTLNLDPQSIFRSSSITPQSLSWQLLIAAFRSVFTARPMPRR GLNALIY
Sequences:
>Translated_87_residues MQLLLLHRAFGPDVRRQCRAARKQTAGSSFPAVRKMNGNTLNLDPQSIFRSSSITPQSLSWQLLIAAFRSVFTARPMPRR GLNALIY >Mature_87_residues MQLLLLHRAFGPDVRRQCRAARKQTAGSSFPAVRKMNGNTLNLDPQSIFRSSSITPQSLSWQLLIAAFRSVFTARPMPRR GLNALIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9801; Mature: 9801
Theoretical pI: Translated: 12.58; Mature: 12.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLLLHRAFGPDVRRQCRAARKQTAGSSFPAVRKMNGNTLNLDPQSIFRSSSITPQSLS CCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCEECCCHHHHHHCCCCCCCCCH WQLLIAAFRSVFTARPMPRRGLNALIY HHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQLLLLHRAFGPDVRRQCRAARKQTAGSSFPAVRKMNGNTLNLDPQSIFRSSSITPQSLS CCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCEECCCHHHHHHCCCCCCCCCH WQLLIAAFRSVFTARPMPRRGLNALIY HHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA