| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is recX [H]
Identifier: 77457403
GI number: 77457403
Start: 1347339
End: 1347809
Strand: Direct
Name: recX [H]
Synonym: Pfl01_1176
Alternate gene names: 77457403
Gene position: 1347339-1347809 (Clockwise)
Preceding gene: 77457402
Following gene: 77457405
Centisome position: 20.93
GC content: 60.51
Gene sequence:
>471_bases ATGACAACCGCCGTACTCGATACCCTCGTCGCGGTGCGGCGAACCGCCATGGACCTGCTCGCACGCCGCGAGCACGGTCG AGTCGAGCTGACGCGCAAACTGCGTCAGCGTGGCGCTCCCCCCGAGATGATCGAAACAGCCCTCGACCGATTGACGGAAG AAGGGCTGCTTTCCGAAGCCCGCTATCTTGAAAGCTTTGTTTCCTATCGCGCCCGCTCCGGTTATGGCCCTCTGCGGATT CGCGAAGAACTGAGCCAGCGCGGTTTGCAACGCGCCGATATCGAACTCGCCTTGCGCGATAGCGGCATCAACTGGCAGGA GCAGCTAACGGACACGTGGCAACGGAAGTTCTCCGGACAACTTCCCGGCGATGCCAAGGAACGCGCCAGACAAGGTCGAT TCCTGGCGTACCGGGGATTCTCGATGGAGATGATCAACCGCTTGTTCAGCGGCAGAGGAATGGACGATTAA
Upstream 100 bases:
>100_bases GTGACAAGCTGCTGTCGCCAGCCGTGATCGCCGACTCCAAGGCTTCTGCGGTCAAAGAGACCGAAGACGACCTGGCTGAC GCTGACATCTGATTGCACCG
Downstream 100 bases:
>100_bases ATCGCTCCAGCTTCAATCAAAAAAAAACGGCCCGCTATTTCGATAGCGGGCCGTTTTTTTTTGCCTTCACGTTACCTTCG ACGGTTCGCGGGTGCGTTGC
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTTAVLDTLVAVRRTAMDLLARREHGRVELTRKLRQRGAPPEMIETALDRLTEEGLLSEARYLESFVSYRARSGYGPLRI REELSQRGLQRADIELALRDSGINWQEQLTDTWQRKFSGQLPGDAKERARQGRFLAYRGFSMEMINRLFSGRGMDD
Sequences:
>Translated_156_residues MTTAVLDTLVAVRRTAMDLLARREHGRVELTRKLRQRGAPPEMIETALDRLTEEGLLSEARYLESFVSYRARSGYGPLRI REELSQRGLQRADIELALRDSGINWQEQLTDTWQRKFSGQLPGDAKERARQGRFLAYRGFSMEMINRLFSGRGMDD >Mature_155_residues TTAVLDTLVAVRRTAMDLLARREHGRVELTRKLRQRGAPPEMIETALDRLTEEGLLSEARYLESFVSYRARSGYGPLRIR EELSQRGLQRADIELALRDSGINWQEQLTDTWQRKFSGQLPGDAKERARQGRFLAYRGFSMEMINRLFSGRGMDD
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
Organism=Escherichia coli, GI1789050, Length=144, Percent_Identity=37.5, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 18006; Mature: 17875
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAVLDTLVAVRRTAMDLLARREHGRVELTRKLRQRGAPPEMIETALDRLTEEGLLSEA CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RYLESFVSYRARSGYGPLRIREELSQRGLQRADIELALRDSGINWQEQLTDTWQRKFSGQ HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHCCC LPGDAKERARQGRFLAYRGFSMEMINRLFSGRGMDD CCCCHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TTAVLDTLVAVRRTAMDLLARREHGRVELTRKLRQRGAPPEMIETALDRLTEEGLLSEA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RYLESFVSYRARSGYGPLRIREELSQRGLQRADIELALRDSGINWQEQLTDTWQRKFSGQ HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHCCC LPGDAKERARQGRFLAYRGFSMEMINRLFSGRGMDD CCCCHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA