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The map label for this gene is ygaD [C]

Identifier: 77457401

GI number: 77457401

Start: 1345655

End: 1346188

Strand: Direct

Name: ygaD [C]

Synonym: Pfl01_1174

Alternate gene names: 77457401

Gene position: 1345655-1346188 (Clockwise)

Preceding gene: 77457400

Following gene: 77457402

Centisome position: 20.9

GC content: 65.17

Gene sequence:

>534_bases
GTGGTACCCATTCCATCCGATCCGGAGCGCGCCGTGAAAGAAATCACTCAATTGGCGGCCGAACTTGGCCGACGCCTGCA
GTTGCTCAATGCCCACGTCACGACGGCCGAGTCCTGTACCGGTGGCGGGATTGCCGAAGCCATCACCCGGATTCCGGGAA
GTTCGGCGTGGTTCGAAGCGGGTTACGTGACCTACTCCAACCGCCAGAAAACCCAGCAGCTGAATGTACCGACGGAGCTG
TTCGGCACTGTGGGTGCGGTCAGTCGCGAGGTGGTCGAGGCCATGGTGCGCGGCGCCCGGGAGAAAAGCCTGGCGCGGTT
TGCCGTGGCGGTCAGCGGCGTGGCCGGGCCGGACGGTGGTTCGCCGAACAAACCGGTGGGCACCGTCTGGCTGGCGTGGG
GCGTGGGCGACCAGGTTTCCAGCGAGGTCCAGCACTTCCCCGGCAACCGCGACGACGTCCGCCGACAAACGGTGAAGGCC
GCGCTAGAGGGCTTGCTGCGACTAGCGGCACGAGAAATCGAAAATCAGGGGTAG

Upstream 100 bases:

>100_bases
GACTGATTGCCTTGCAGGCTTGTCAGGCCTATATCAGAGCGCTGGCGCCCGCACATTTTGAATAAGCTTGTGTATTGAAA
GCGCAACCGGCTCGTGTACG

Downstream 100 bases:

>100_bases
GCGATCCGTGAACGCTGTGGAATAATACTGGCTACTTATACAGGTGTTGGCCGTCAGGCCTTATTGATTACGTGAGGACT
TTAATGGACGACAACAAGAA

Product: CinA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MVPIPSDPERAVKEITQLAAELGRRLQLLNAHVTTAESCTGGGIAEAITRIPGSSAWFEAGYVTYSNRQKTQQLNVPTEL
FGTVGAVSREVVEAMVRGAREKSLARFAVAVSGVAGPDGGSPNKPVGTVWLAWGVGDQVSSEVQHFPGNRDDVRRQTVKA
ALEGLLRLAAREIENQG

Sequences:

>Translated_177_residues
MVPIPSDPERAVKEITQLAAELGRRLQLLNAHVTTAESCTGGGIAEAITRIPGSSAWFEAGYVTYSNRQKTQQLNVPTEL
FGTVGAVSREVVEAMVRGAREKSLARFAVAVSGVAGPDGGSPNKPVGTVWLAWGVGDQVSSEVQHFPGNRDDVRRQTVKA
ALEGLLRLAAREIENQG
>Mature_177_residues
MVPIPSDPERAVKEITQLAAELGRRLQLLNAHVTTAESCTGGGIAEAITRIPGSSAWFEAGYVTYSNRQKTQQLNVPTEL
FGTVGAVSREVVEAMVRGAREKSLARFAVAVSGVAGPDGGSPNKPVGTVWLAWGVGDQVSSEVQHFPGNRDDVRRQTVKA
ALEGLLRLAAREIENQG

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=154, Percent_Identity=50.6493506493506, Blast_Score=141, Evalue=2e-35,
Organism=Escherichia coli, GI1787818, Length=145, Percent_Identity=35.8620689655172, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 18833; Mature: 18833

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPIPSDPERAVKEITQLAAELGRRLQLLNAHVTTAESCTGGGIAEAITRIPGSSAWFEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC
GYVTYSNRQKTQQLNVPTELFGTVGAVSREVVEAMVRGAREKSLARFAVAVSGVAGPDGG
CCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCC
SPNKPVGTVWLAWGVGDQVSSEVQHFPGNRDDVRRQTVKAALEGLLRLAAREIENQG
CCCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVPIPSDPERAVKEITQLAAELGRRLQLLNAHVTTAESCTGGGIAEAITRIPGSSAWFEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC
GYVTYSNRQKTQQLNVPTELFGTVGAVSREVVEAMVRGAREKSLARFAVAVSGVAGPDGG
CCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCC
SPNKPVGTVWLAWGVGDQVSSEVQHFPGNRDDVRRQTVKAALEGLLRLAAREIENQG
CCCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA