| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457400
Identifier: 77457400
GI number: 77457400
Start: 1345104
End: 1345619
Strand: Direct
Name: 77457400
Synonym: Pfl01_1173
Alternate gene names: NA
Gene position: 1345104-1345619 (Clockwise)
Preceding gene: 77457399
Following gene: 77457401
Centisome position: 20.89
GC content: 64.34
Gene sequence:
>516_bases CTGAGCGTCTGGCGGCTGATCGGTCTGATGCTGCTGGCCGCAGGTTCGGCGGCGCTGGCCTGGCAGGTTCAGGACTGGCG CTACGAAGGGCATCTGGCGGAGCAGGCCCGGCTTCACGCCGAAACCCTCAATCAACTGACTTCGGCCGCCGCCACCGCGC AACAGGCCGAGCAGGACAAGCGTCTGGCCCTGGAGCAACGACTCACGGCCAGTGAACAAACCCATTACCGAGCACTGAAC GATGCCCAACGTGATCAGGATCGCTTGCGTGATCGTCTTGCCACTGCTGATCTGCGCCTGTCAGTCCTCATCGACGCAGG CGACGCTGCCCAAGGCTGCGGTGTGCCAGCCACCTCCGGCGCCGGCGGCGTGGATCATGCAGCCGTACGCGCCCGACTTG ACCCGGCGCATGCTCGACGAATTGTCGCCATCACCGGCGAAGGCGACCGCGGACTGATTGCCTTGCAGGCTTGTCAGGCC TATATCAGAGCGCTGGCGCCCGCACATTTTGAATAA
Upstream 100 bases:
>100_bases TCAACAGCATTACCCGGCGGATCAACGGAGGGTTGAACGGTTTGCAGGATCGCCTGGAACTCTGGGGGCGGGCGAGGGCG GTGTTATGCCTGCCTTCGGT
Downstream 100 bases:
>100_bases GCTTGTGTATTGAAAGCGCAACCGGCTCGTGTACGGTGGTACCCATTCCATCCGATCCGGAGCGCGCCGTGAAAGAAATC ACTCAATTGGCGGCCGAACT
Product: bacteriophage signal peptide protein
Products: NA
Alternate protein names: Bacteriophage Signal Peptide Protein; Phage-Like Protein
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSVWRLIGLMLLAAGSAALAWQVQDWRYEGHLAEQARLHAETLNQLTSAAATAQQAEQDKRLALEQRLTASEQTHYRALN DAQRDQDRLRDRLATADLRLSVLIDAGDAAQGCGVPATSGAGGVDHAAVRARLDPAHARRIVAITGEGDRGLIALQACQA YIRALAPAHFE
Sequences:
>Translated_171_residues MSVWRLIGLMLLAAGSAALAWQVQDWRYEGHLAEQARLHAETLNQLTSAAATAQQAEQDKRLALEQRLTASEQTHYRALN DAQRDQDRLRDRLATADLRLSVLIDAGDAAQGCGVPATSGAGGVDHAAVRARLDPAHARRIVAITGEGDRGLIALQACQA YIRALAPAHFE >Mature_170_residues SVWRLIGLMLLAAGSAALAWQVQDWRYEGHLAEQARLHAETLNQLTSAAATAQQAEQDKRLALEQRLTASEQTHYRALND AQRDQDRLRDRLATADLRLSVLIDAGDAAQGCGVPATSGAGGVDHAAVRARLDPAHARRIVAITGEGDRGLIALQACQAY IRALAPAHFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18453; Mature: 18322
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVWRLIGLMLLAAGSAALAWQVQDWRYEGHLAEQARLHAETLNQLTSAAATAQQAEQDK CHHHHHHHHHHHHCCCCCEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLALEQRLTASEQTHYRALNDAQRDQDRLRDRLATADLRLSVLIDAGDAAQGCGVPATSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCC AGGVDHAAVRARLDPAHARRIVAITGEGDRGLIALQACQAYIRALAPAHFE CCCCHHHHHHHHCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SVWRLIGLMLLAAGSAALAWQVQDWRYEGHLAEQARLHAETLNQLTSAAATAQQAEQDK HHHHHHHHHHHHCCCCCEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLALEQRLTASEQTHYRALNDAQRDQDRLRDRLATADLRLSVLIDAGDAAQGCGVPATSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCC AGGVDHAAVRARLDPAHARRIVAITGEGDRGLIALQACQAYIRALAPAHFE CCCCHHHHHHHHCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA