| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457391
Identifier: 77457391
GI number: 77457391
Start: 1338164
End: 1339315
Strand: Direct
Name: 77457391
Synonym: Pfl01_1164
Alternate gene names: NA
Gene position: 1338164-1339315 (Clockwise)
Preceding gene: 77457390
Following gene: 77457392
Centisome position: 20.78
GC content: 59.46
Gene sequence:
>1152_bases ATGGATTATCCGAAGAGTGTCCCCAGCGCCGGTCTGGTGAACGGGAAATTTATCGATGAGAACCCGCTGACCGGGACGCC GGGGTCGTTGATCCCCGCTGACTGGGGCAACAGTGTCACGCAGGAAATTCTCAGCGTGATCAAGGCCGGGGATCTTACCC CGGACGAGAAGAAATACGATCAGTTGTTGCAGGCGATTCAGACGGTGACGGCCAAAGGCTGGAATCAGGATCTGGCGTTG CCGCTGGCAGCATTGCCATTGCCGACCGTGGCCACGTCGGATGCCCGGATGCCGATCACACCGGCAGCCGCATCGACCAG TGGCGGGCGAGTTTCGGTGCCGGCGGGTGTTTACGTCAGCATCGGTCAGGAAGTGGTGGCGGGGCAGCTGGGACGTTCGC GAACGTTCACCACTCAGGCCTGGAGCAGCGCCGATCTGCTGCCGAGCTCGGGTTACTTTCTGCGGGCGCAGGTGGTGGGT GGTGCGCTGACGTTTTACATGCAGCGCGGGACGATTTATGACGCCAGCCCCGATAGCTTGAAGGGGACGGTCAATGGGGC GGCAGGTGGTGGTTTCCAGTCGACACCGCTGGATATTTGTCTCGCCTGGGTCGTCACGGCGGGTCCGGGATCCGTGCCGA TTGTCCGGCAGATCTACAACCGTAACCGGTTGTCCTGGACTCAGGTGGTCAATGGCAATGGCGTGGTCTATCTGCCGCTC GACCCTCATGCTCGAACAGCACGTCTGGTGGTCGGGAATCCGACCCCGCACCCGACGGCTATCACTGGTGTGTCGTTTGC ACCGGGCGGCTGGCTGGGAGGGAATTACTGTTTCCTCAATCCGACTATCGGTACGTCCAATAATTGGGACGGCTGGGGAA CGGCAGGCGCATCGGTGGGAATCTTCACCAGTAACGTCGTCAACGACACCACGCTTTCAACGTTGACGGCCGGTTTCGAT CACTCGGAACTGCGTTCGCTGTGGCAGGTGTACCAAGCCGAGCACACCTGGAACGCAGGGAATGCCGTCAGTGACGAATT GCTATTCGGGATGGGGATCAAAAGCTTTTCTCAAACCGATTATTCGAACGGCATCGCAGTCAATTTCACGGCGGCCGTGA ATGTGCATTTGTCTTGGGAGTTGATCCGATGA
Upstream 100 bases:
>100_bases GCTTTGGCGTGAATCCGGGCTCGGCGCTGGAATGCCTGATTCATCGGGCAGCACCGGCGCATACGAAGGTGCATATCAAC TATGACTAGGGAATAACGCA
Downstream 100 bases:
>100_bases ACATCATTCAGGAACTGCATCAATTCGAAGACGGCTTGCGTCCGGTACCACCTTCTGCCGCCCATGACTGGGACGGTGAG CAATGGCATGCCAGCGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MDYPKSVPSAGLVNGKFIDENPLTGTPGSLIPADWGNSVTQEILSVIKAGDLTPDEKKYDQLLQAIQTVTAKGWNQDLAL PLAALPLPTVATSDARMPITPAAASTSGGRVSVPAGVYVSIGQEVVAGQLGRSRTFTTQAWSSADLLPSSGYFLRAQVVG GALTFYMQRGTIYDASPDSLKGTVNGAAGGGFQSTPLDICLAWVVTAGPGSVPIVRQIYNRNRLSWTQVVNGNGVVYLPL DPHARTARLVVGNPTPHPTAITGVSFAPGGWLGGNYCFLNPTIGTSNNWDGWGTAGASVGIFTSNVVNDTTLSTLTAGFD HSELRSLWQVYQAEHTWNAGNAVSDELLFGMGIKSFSQTDYSNGIAVNFTAAVNVHLSWELIR
Sequences:
>Translated_383_residues MDYPKSVPSAGLVNGKFIDENPLTGTPGSLIPADWGNSVTQEILSVIKAGDLTPDEKKYDQLLQAIQTVTAKGWNQDLAL PLAALPLPTVATSDARMPITPAAASTSGGRVSVPAGVYVSIGQEVVAGQLGRSRTFTTQAWSSADLLPSSGYFLRAQVVG GALTFYMQRGTIYDASPDSLKGTVNGAAGGGFQSTPLDICLAWVVTAGPGSVPIVRQIYNRNRLSWTQVVNGNGVVYLPL DPHARTARLVVGNPTPHPTAITGVSFAPGGWLGGNYCFLNPTIGTSNNWDGWGTAGASVGIFTSNVVNDTTLSTLTAGFD HSELRSLWQVYQAEHTWNAGNAVSDELLFGMGIKSFSQTDYSNGIAVNFTAAVNVHLSWELIR >Mature_383_residues MDYPKSVPSAGLVNGKFIDENPLTGTPGSLIPADWGNSVTQEILSVIKAGDLTPDEKKYDQLLQAIQTVTAKGWNQDLAL PLAALPLPTVATSDARMPITPAAASTSGGRVSVPAGVYVSIGQEVVAGQLGRSRTFTTQAWSSADLLPSSGYFLRAQVVG GALTFYMQRGTIYDASPDSLKGTVNGAAGGGFQSTPLDICLAWVVTAGPGSVPIVRQIYNRNRLSWTQVVNGNGVVYLPL DPHARTARLVVGNPTPHPTAITGVSFAPGGWLGGNYCFLNPTIGTSNNWDGWGTAGASVGIFTSNVVNDTTLSTLTAGFD HSELRSLWQVYQAEHTWNAGNAVSDELLFGMGIKSFSQTDYSNGIAVNFTAAVNVHLSWELIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40374; Mature: 40374
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYPKSVPSAGLVNGKFIDENPLTGTPGSLIPADWGNSVTQEILSVIKAGDLTPDEKKYD CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH QLLQAIQTVTAKGWNQDLALPLAALPLPTVATSDARMPITPAAASTSGGRVSVPAGVYVS HHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEE IGQEVVAGQLGRSRTFTTQAWSSADLLPSSGYFLRAQVVGGALTFYMQRGTIYDASPDSL CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEECCCCCCC KGTVNGAAGGGFQSTPLDICLAWVVTAGPGSVPIVRQIYNRNRLSWTQVVNGNGVVYLPL EEEECCCCCCCCCCCHHHHEEEEHEECCCCCCHHHHHHHCCCCCEEEEEECCCCEEEEEC DPHARTARLVVGNPTPHPTAITGVSFAPGGWLGGNYCFLNPTIGTSNNWDGWGTAGASVG CCCCCEEEEEECCCCCCCCEEEECEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE IFTSNVVNDTTLSTLTAGFDHSELRSLWQVYQAEHTWNAGNAVSDELLFGMGIKSFSQTD EEECCCCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHCCCC YSNGIAVNFTAAVNVHLSWELIR CCCCEEEEEEEEEEEEEEEEEEC >Mature Secondary Structure MDYPKSVPSAGLVNGKFIDENPLTGTPGSLIPADWGNSVTQEILSVIKAGDLTPDEKKYD CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH QLLQAIQTVTAKGWNQDLALPLAALPLPTVATSDARMPITPAAASTSGGRVSVPAGVYVS HHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEE IGQEVVAGQLGRSRTFTTQAWSSADLLPSSGYFLRAQVVGGALTFYMQRGTIYDASPDSL CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEECCCCCCC KGTVNGAAGGGFQSTPLDICLAWVVTAGPGSVPIVRQIYNRNRLSWTQVVNGNGVVYLPL EEEECCCCCCCCCCCHHHHEEEEHEECCCCCCHHHHHHHCCCCCEEEEEECCCCEEEEEC DPHARTARLVVGNPTPHPTAITGVSFAPGGWLGGNYCFLNPTIGTSNNWDGWGTAGASVG CCCCCEEEEEECCCCCCCCEEEECEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE IFTSNVVNDTTLSTLTAGFDHSELRSLWQVYQAEHTWNAGNAVSDELLFGMGIKSFSQTD EEECCCCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHCCCC YSNGIAVNFTAAVNVHLSWELIR CCCCEEEEEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA