| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457387
Identifier: 77457387
GI number: 77457387
Start: 1335625
End: 1336134
Strand: Direct
Name: 77457387
Synonym: Pfl01_1160
Alternate gene names: NA
Gene position: 1335625-1336134 (Clockwise)
Preceding gene: 77457386
Following gene: 77457388
Centisome position: 20.74
GC content: 65.1
Gene sequence:
>510_bases ATGAGCCTACTGACACGCCTGCTGGCGCGCGGCACTGTCGTGCTCGCCAATTCGGCATCCAAGCTGCAATCGCTGCAAAT GCGCCTCACCGCCGGTGAAGTGAACGACGACATGGAGCACTTCGAGCCCTACGGCTTCACCAGCCATCCGCTGGCCGGTG CCGAAGGCGTCGTCACGTTTCTCGGCGGCGACCGTTCCCACGCCATCGCTCTGGTGGTCGCCGACCGCCGTTACCGCCTG CAATCGCTGGCGGCCGGCGAGGTGGCGATCTACACCGACGAGGGCGACAAGATTCACTTCAAGCGCGGGCGGATCATCGA CATCGAAACCGCCACGCTCAATATCCGCGCCAGCACCGCCGTGAACTTCGAGACGCCGGTGATCAACCAGACCGGCAAGA TCGTTTCCAAGGGCGATCAAGTGGCCGGCGGCATCAGCCAGATCAAGCACGTGCACGTTGGCGTGCAGGCGGGCAGTGGC CAGACCGGCGCGCCGGCGGGAGGTCAGTGA
Upstream 100 bases:
>100_bases CTCGGTGACCACGCTACAAGTGGCGCCGCCGCATACCTTCGACGCCAATCCGACCCCACCGAAAAAAGCCTGAGCCGGCA CCTCCCTCCAAGGAAACCCT
Downstream 100 bases:
>100_bases TGCTGTTCAGTCAGAACCTCCACGCCGCGCTGACCCGTGCGGTGCTGATCAGCCTGTTCACCTGGCGCCGCGCCGCCGAC GACGATGCCCTCGACGACGA
Product: Phage baseplate assembly protein V
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSLLTRLLARGTVVLANSASKLQSLQMRLTAGEVNDDMEHFEPYGFTSHPLAGAEGVVTFLGGDRSHAIALVVADRRYRL QSLAAGEVAIYTDEGDKIHFKRGRIIDIETATLNIRASTAVNFETPVINQTGKIVSKGDQVAGGISQIKHVHVGVQAGSG QTGAPAGGQ
Sequences:
>Translated_169_residues MSLLTRLLARGTVVLANSASKLQSLQMRLTAGEVNDDMEHFEPYGFTSHPLAGAEGVVTFLGGDRSHAIALVVADRRYRL QSLAAGEVAIYTDEGDKIHFKRGRIIDIETATLNIRASTAVNFETPVINQTGKIVSKGDQVAGGISQIKHVHVGVQAGSG QTGAPAGGQ >Mature_168_residues SLLTRLLARGTVVLANSASKLQSLQMRLTAGEVNDDMEHFEPYGFTSHPLAGAEGVVTFLGGDRSHAIALVVADRRYRLQ SLAAGEVAIYTDEGDKIHFKRGRIIDIETATLNIRASTAVNFETPVINQTGKIVSKGDQVAGGISQIKHVHVGVQAGSGQ TGAPAGGQ
Specific function: Unknown
COG id: COG4384
COG function: function code S; Mu-like prophage protein gp45
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein gp45 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014462 - InterPro: IPR013046 - InterPro: IPR010688 [H]
Pfam domain/function: PF06890 Phage_Mu_Gp45 [H]
EC number: NA
Molecular weight: Translated: 17835; Mature: 17704
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLTRLLARGTVVLANSASKLQSLQMRLTAGEVNDDMEHFEPYGFTSHPLAGAEGVVTF CHHHHHHHHCCEEEEECCHHHHHHEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCEEEE LGGDRSHAIALVVADRRYRLQSLAAGEVAIYTDEGDKIHFKRGRIIDIETATLNIRASTA ECCCCCCEEEEEEECCCHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEEEEEEEECEE VNFETPVINQTGKIVSKGDQVAGGISQIKHVHVGVQAGSGQTGAPAGGQ EECCCCEECCCCCEEECCCCHHCCHHHEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure SLLTRLLARGTVVLANSASKLQSLQMRLTAGEVNDDMEHFEPYGFTSHPLAGAEGVVTF HHHHHHHHCCEEEEECCHHHHHHEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCEEEE LGGDRSHAIALVVADRRYRLQSLAAGEVAIYTDEGDKIHFKRGRIIDIETATLNIRASTA ECCCCCCEEEEEEECCCHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEEEEEEEECEE VNFETPVINQTGKIVSKGDQVAGGISQIKHVHVGVQAGSGQTGAPAGGQ EECCCCEECCCCCEEECCCCHHCCHHHEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]