| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457382
Identifier: 77457382
GI number: 77457382
Start: 1330785
End: 1331132
Strand: Direct
Name: 77457382
Synonym: Pfl01_1155
Alternate gene names: NA
Gene position: 1330785-1331132 (Clockwise)
Preceding gene: 77457381
Following gene: 77457383
Centisome position: 20.67
GC content: 58.05
Gene sequence:
>348_bases ATGGGTCAACTGATTGCAGGCACCTGCTACGTCAAGGTCGACGGTGCACAACTGACTATCAACGGTGGCTGCGAAGCCCC GCTGATGGCCGTCAAACGCGAAACCGTCGTGCCGGGCTTCTACAAGGAAACCGACATCGCGCCATCGTTCAAGGTGACCG CGCTGCACACCGCCGACTTCCCGCTGAAGAAGCTGATCGAAGGCACCGACATCACCGTCACCTGCGAATTCAGCAACGGC AAAGTCTACGTACTGGCCGGTGCCTACCTGGTCGAAGAGCCAGTCTCCAAAGGCGATGACGCCACCATCGAACTGAAATT CGAAGGCATCAAGGGGACCTGGCAATGA
Upstream 100 bases:
>100_bases CAGTTCCGCCTGCAGTACGACGACGTCGCCTGATCGGCGCGTCTGACACTGTGATTTCAGCCCACCTCGCGTGGGCTTTT TATTTGAAGGGAGTAACACC
Downstream 100 bases:
>100_bases GCGGCGCCGTGAAGCTTCAGGTTGCGATCGAAGCTCACGGCGAGCCCCTGACCGAACTCGTCCTGCGCCGTCCAACGGTG CAGGAAGTGCGAGCGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Tube Protein; Outer Membrane Receptor Protein; Phage Tail Protein
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGQLIAGTCYVKVDGAQLTINGGCEAPLMAVKRETVVPGFYKETDIAPSFKVTALHTADFPLKKLIEGTDITVTCEFSNG KVYVLAGAYLVEEPVSKGDDATIELKFEGIKGTWQ
Sequences:
>Translated_115_residues MGQLIAGTCYVKVDGAQLTINGGCEAPLMAVKRETVVPGFYKETDIAPSFKVTALHTADFPLKKLIEGTDITVTCEFSNG KVYVLAGAYLVEEPVSKGDDATIELKFEGIKGTWQ >Mature_114_residues GQLIAGTCYVKVDGAQLTINGGCEAPLMAVKRETVVPGFYKETDIAPSFKVTALHTADFPLKKLIEGTDITVTCEFSNGK VYVLAGAYLVEEPVSKGDDATIELKFEGIKGTWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12360; Mature: 12229
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQLIAGTCYVKVDGAQLTINGGCEAPLMAVKRETVVPGFYKETDIAPSFKVTALHTADF CCCEEEEEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCC PLKKLIEGTDITVTCEFSNGKVYVLAGAYLVEEPVSKGDDATIELKFEGIKGTWQ CHHHHCCCCCEEEEEEECCCEEEEEECCEEEECCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure GQLIAGTCYVKVDGAQLTINGGCEAPLMAVKRETVVPGFYKETDIAPSFKVTALHTADF CCEEEEEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCC PLKKLIEGTDITVTCEFSNGKVYVLAGAYLVEEPVSKGDDATIELKFEGIKGTWQ CHHHHCCCCCEEEEEEECCCEEEEEECCEEEECCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA