| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457381
Identifier: 77457381
GI number: 77457381
Start: 1329221
End: 1330717
Strand: Direct
Name: 77457381
Synonym: Pfl01_1154
Alternate gene names: NA
Gene position: 1329221-1330717 (Clockwise)
Preceding gene: 77457380
Following gene: 77457382
Centisome position: 20.65
GC content: 64.93
Gene sequence:
>1497_bases ATGGCGATCGGATTCAGCAACATCCCTGCGGACATTCGTGTACCGCTGTTCTATGCCGAAATGGACAACTCGGCCGCCAA TAGCGCGTCCTCGTCCATGCGTCGCCTGATCGTGGCGCAGGTCAACGACAACATCGCTCCGAGCGAAGTCGGCAAACTGG TGCTGGTCTCCAGCGTGGCGCTGGCCAAGAGCATTGGCGGCCAGGGCTCGATGCTGGCGTCGATGTACGAGACCTTCCGC AAGGCCGACCCGATCGGTGAGATCTGGTGCCTGCCGCTGCACAACGCCACCGGCGCCATCGCCAAAGGCGTGCTGACCCT GACCGGTACCGCGACTCAGGCGGGTGTGCTCAACCTGTATGTCGGCGGCGTCCGCGTCCAGGCCACCGTGGTCAACGGTG CCACGGCTGCACAGGCTGCGACTGCTCTGGCCCAGAAAATCAACGCCACCGCCGATCTGCCGGTGAGCGCAGCAGCGGCC GAAGGCGTGGTCACTCTGAACGCCAAATGGACCGGCGAGAGCGGCAACGACATCAGCCTGCAATTCAATCGCCTGGGCAA GAGCAACGGCGAAGAAACCCCGGCCGGCCTGACCACCGCCATCACCGCCATGACCGGCGGCGTCGGTGTACCGGATCAAG TGGCTGCCGTTGCAGCACTGGGCGATGAGCCGTTCGAATTCATCGCACTGCCATGGTCCGACCTGGCCACCCTCAACACC TGGCAAGCGGTGATGGACGACAGCACCGGTCGCTGGTCGTGGGCCAAGCAACTGTTCGGTCACGTCTACAGCGCCAAGCG CGGCACCGTCGGCACGCTGGTGGCAGCCGGTCAGGCACGCAACGACCAGCACATGACCATTCAGGCGCTGGAGCCGGGCG TTCCGCAACCGGTGTGGGTACAGGCCGCAGCACTGGCCGCACGCACGGCGGTGTTCATCTCCGCCGACGCCAGCCGTCCG ACCCAGAGTGGCAGTCTGCCGGGCGTCGATCCGGCGCCAGCGAGCGAGCGCTTCACCCTGACCGAGCGTCAGTCGCTGCT CAACTACGGCATCGCCACCGCGTACTACGAAGGCGGCTACGTGCGCATCCAGCGCTCGATCACCACCTACCAGAAGAACG CTTACGGCCAGGCTGACAACTCGTACCTGGACAGCGAAACCATGCACCAGTCGGCGTTCATCGTGCGTCGTCTGCAAAGC GTGATCACCAGCAAGTACGGTCGCCACAAACTGGCTTCCGACGGCACCCGTTTCGGCGCCGGCCAGCCGATCGTCACCCC GGCGACCATTCGCGGCGAGCTGATCGCCCAGTACGCCAAGCTCGAACTCGAAGGCCACGTGGAAAACGCCGAGCTGTTCG CCGAGCACCTGATCGTCGAGCGCGACGTGCAGGACCCGAGCCGCGTGAACGTGCTGTTCCCGCCGGATTACATCAACGGT CTGCGCGTGTTCGCACTGCTCAACCAGTTCCGCCTGCAGTACGACGACGTCGCCTGA
Upstream 100 bases:
>100_bases AAGGCCGTGAAGTGCTGGACAGCGCCTGGTGGCGCCGGCGTCTGGCCGACGGCGATATCACCCTCAAAACCGCAACAGCC AAACAAAAGGGAGCCAAATA
Downstream 100 bases:
>100_bases TCGGCGCGTCTGACACTGTGATTTCAGCCCACCTCGCGTGGGCTTTTTATTTGAAGGGAGTAACACCATGGGTCAACTGA TTGCAGGCACCTGCTACGTC
Product: bacteriophage Mu tail sheath
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MAIGFSNIPADIRVPLFYAEMDNSAANSASSSMRRLIVAQVNDNIAPSEVGKLVLVSSVALAKSIGGQGSMLASMYETFR KADPIGEIWCLPLHNATGAIAKGVLTLTGTATQAGVLNLYVGGVRVQATVVNGATAAQAATALAQKINATADLPVSAAAA EGVVTLNAKWTGESGNDISLQFNRLGKSNGEETPAGLTTAITAMTGGVGVPDQVAAVAALGDEPFEFIALPWSDLATLNT WQAVMDDSTGRWSWAKQLFGHVYSAKRGTVGTLVAAGQARNDQHMTIQALEPGVPQPVWVQAAALAARTAVFISADASRP TQSGSLPGVDPAPASERFTLTERQSLLNYGIATAYYEGGYVRIQRSITTYQKNAYGQADNSYLDSETMHQSAFIVRRLQS VITSKYGRHKLASDGTRFGAGQPIVTPATIRGELIAQYAKLELEGHVENAELFAEHLIVERDVQDPSRVNVLFPPDYING LRVFALLNQFRLQYDDVA
Sequences:
>Translated_498_residues MAIGFSNIPADIRVPLFYAEMDNSAANSASSSMRRLIVAQVNDNIAPSEVGKLVLVSSVALAKSIGGQGSMLASMYETFR KADPIGEIWCLPLHNATGAIAKGVLTLTGTATQAGVLNLYVGGVRVQATVVNGATAAQAATALAQKINATADLPVSAAAA EGVVTLNAKWTGESGNDISLQFNRLGKSNGEETPAGLTTAITAMTGGVGVPDQVAAVAALGDEPFEFIALPWSDLATLNT WQAVMDDSTGRWSWAKQLFGHVYSAKRGTVGTLVAAGQARNDQHMTIQALEPGVPQPVWVQAAALAARTAVFISADASRP TQSGSLPGVDPAPASERFTLTERQSLLNYGIATAYYEGGYVRIQRSITTYQKNAYGQADNSYLDSETMHQSAFIVRRLQS VITSKYGRHKLASDGTRFGAGQPIVTPATIRGELIAQYAKLELEGHVENAELFAEHLIVERDVQDPSRVNVLFPPDYING LRVFALLNQFRLQYDDVA >Mature_497_residues AIGFSNIPADIRVPLFYAEMDNSAANSASSSMRRLIVAQVNDNIAPSEVGKLVLVSSVALAKSIGGQGSMLASMYETFRK ADPIGEIWCLPLHNATGAIAKGVLTLTGTATQAGVLNLYVGGVRVQATVVNGATAAQAATALAQKINATADLPVSAAAAE GVVTLNAKWTGESGNDISLQFNRLGKSNGEETPAGLTTAITAMTGGVGVPDQVAAVAALGDEPFEFIALPWSDLATLNTW QAVMDDSTGRWSWAKQLFGHVYSAKRGTVGTLVAAGQARNDQHMTIQALEPGVPQPVWVQAAALAARTAVFISADASRPT QSGSLPGVDPAPASERFTLTERQSLLNYGIATAYYEGGYVRIQRSITTYQKNAYGQADNSYLDSETMHQSAFIVRRLQSV ITSKYGRHKLASDGTRFGAGQPIVTPATIRGELIAQYAKLELEGHVENAELFAEHLIVERDVQDPSRVNVLFPPDYINGL RVFALLNQFRLQYDDVA
Specific function: Major component of the tail [H]
COG id: COG4386
COG function: function code R; Mu-like prophage tail sheath protein gpL
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein L [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007067 [H]
Pfam domain/function: PF04984 Phage_sheath_1 [H]
EC number: NA
Molecular weight: Translated: 52887; Mature: 52756
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIGFSNIPADIRVPLFYAEMDNSAANSASSSMRRLIVAQVNDNIAPSEVGKLVLVSSVA CCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHEEEEEECCCCCCHHHHCCCHHHHHHH LAKSIGGQGSMLASMYETFRKADPIGEIWCLPLHNATGAIAKGVLTLTGTATQAGVLNLY HHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCEEEEECCCCCCCEEEEE VGGVRVQATVVNGATAAQAATALAQKINATADLPVSAAAAEGVVTLNAKWTGESGNDISL ECCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEEEEECCCCCCEEEE QFNRLGKSNGEETPAGLTTAITAMTGGVGVPDQVAAVAALGDEPFEFIALPWSDLATLNT EEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHH WQAVMDDSTGRWSWAKQLFGHVYSAKRGTVGTLVAAGQARNDQHMTIQALEPGVPQPVWV HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHH QAAALAARTAVFISADASRPTQSGSLPGVDPAPASERFTLTERQSLLNYGIATAYYEGGY HHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCEEEEECCCE VRIQRSITTYQKNAYGQADNSYLDSETMHQSAFIVRRLQSVITSKYGRHKLASDGTRFGA EEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GQPIVTPATIRGELIAQYAKLELEGHVENAELFAEHLIVERDVQDPSRVNVLFPPDYING CCCCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH LRVFALLNQFRLQYDDVA HHHHHHHHHHHHHCCCCC >Mature Secondary Structure AIGFSNIPADIRVPLFYAEMDNSAANSASSSMRRLIVAQVNDNIAPSEVGKLVLVSSVA CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHEEEEEECCCCCCHHHHCCCHHHHHHH LAKSIGGQGSMLASMYETFRKADPIGEIWCLPLHNATGAIAKGVLTLTGTATQAGVLNLY HHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCEEEEECCCCCCCEEEEE VGGVRVQATVVNGATAAQAATALAQKINATADLPVSAAAAEGVVTLNAKWTGESGNDISL ECCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEEEEECCCCCCEEEE QFNRLGKSNGEETPAGLTTAITAMTGGVGVPDQVAAVAALGDEPFEFIALPWSDLATLNT EEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHH WQAVMDDSTGRWSWAKQLFGHVYSAKRGTVGTLVAAGQARNDQHMTIQALEPGVPQPVWV HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHH QAAALAARTAVFISADASRPTQSGSLPGVDPAPASERFTLTERQSLLNYGIATAYYEGGY HHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCEEEEECCCE VRIQRSITTYQKNAYGQADNSYLDSETMHQSAFIVRRLQSVITSKYGRHKLASDGTRFGA EEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GQPIVTPATIRGELIAQYAKLELEGHVENAELFAEHLIVERDVQDPSRVNVLFPPDYING CCCCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH LRVFALLNQFRLQYDDVA HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]