| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457280
Identifier: 77457280
GI number: 77457280
Start: 1220793
End: 1221329
Strand: Direct
Name: 77457280
Synonym: Pfl01_1053
Alternate gene names: NA
Gene position: 1220793-1221329 (Clockwise)
Preceding gene: 77457279
Following gene: 77457281
Centisome position: 18.96
GC content: 66.29
Gene sequence:
>537_bases ATGAGCGAAATCACCGCCAAACGCAGCGCTGCACCGGTGGCGAAGCAGGCGTTGTTTCTGCTGTTTCGCATCGGCAGCGA ACGCTACGCCCTGCGCGCCACGGAAGTAGCCGAAGTGCTGCCGCGCCTGCCGTTGAAGCCGATTGCCCGGGCGCCGCACT GGGTGGCGGGGGTGTTCGCCTATCGCGGCACGGTGGTGCCGGTGATCGACCTCAGTGCCCTGACCTTCGGCCATCCTGCG CAAGCGCGCACCAGCACGCGACTGGTGCTGGTGCATTACCGCGCGGAAGACTCGCAACCCGCGCAGTGGTTGGGACTGAT CCTCGAACAGGCCACCGACACCCTGCGCTGCAACCCGGATGAGTTTCAGTCGTACGGCCTCGACAATCGTCAGGCACCGT ACCTGGGCCCGGTGCGCGAAGACGCGCAAGGGCTGGTGCAGTGGGTACGGGTCAACGACTTGCTCGACGAGTCGGTGCGC ACGCTGTTGTTCCCGACACCGCCGCTGGATCCGGCGCGGCTTGAGGAGCAGCCATGA
Upstream 100 bases:
>100_bases GCCAGACCGTCGAGTCGTTGCGTCAGGCCAGTTTCGCCATCGACGAACTGAGCCAGGTGGCCGTGGGCCTGCGCAGCGGC GTTTCGCGATTCAAAGTCTG
Downstream 100 bases:
>100_bases GCAGCGACCAGCGCTTCTTCGACTTTCTCAAGGAACGCATCGGCCTCGACGTCGCTTCGGTCGGGCCGGCGATCATCGAG CGGGCCGTGCGCCAGCGCAT
Product: CheW protein
Products: NA
Alternate protein names: Chemotaxis Signal Transduction Protein; Chemotaxis-Related Protein; CheW Domain-Containing Protein; CheW Domain Protein; CheW Domain-Containing Protein WspB; Chemotaxis Signal Transduction Protein CheW; CheW-Like Domain-Containing; Chemotaxis Signal Transducer CheW-Like Protein; Chemotaxis-Like Protein; Chemotaxis Protein; Chemotaxis Signal Transducer Chew-Like Protein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSEITAKRSAAPVAKQALFLLFRIGSERYALRATEVAEVLPRLPLKPIARAPHWVAGVFAYRGTVVPVIDLSALTFGHPA QARTSTRLVLVHYRAEDSQPAQWLGLILEQATDTLRCNPDEFQSYGLDNRQAPYLGPVREDAQGLVQWVRVNDLLDESVR TLLFPTPPLDPARLEEQP
Sequences:
>Translated_178_residues MSEITAKRSAAPVAKQALFLLFRIGSERYALRATEVAEVLPRLPLKPIARAPHWVAGVFAYRGTVVPVIDLSALTFGHPA QARTSTRLVLVHYRAEDSQPAQWLGLILEQATDTLRCNPDEFQSYGLDNRQAPYLGPVREDAQGLVQWVRVNDLLDESVR TLLFPTPPLDPARLEEQP >Mature_177_residues SEITAKRSAAPVAKQALFLLFRIGSERYALRATEVAEVLPRLPLKPIARAPHWVAGVFAYRGTVVPVIDLSALTFGHPAQ ARTSTRLVLVHYRAEDSQPAQWLGLILEQATDTLRCNPDEFQSYGLDNRQAPYLGPVREDAQGLVQWVRVNDLLDESVRT LLFPTPPLDPARLEEQP
Specific function: Unknown
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19864; Mature: 19733
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEITAKRSAAPVAKQALFLLFRIGSERYALRATEVAEVLPRLPLKPIARAPHWVAGVFA CCCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHH YRGTVVPVIDLSALTFGHPAQARTSTRLVLVHYRAEDSQPAQWLGLILEQATDTLRCNPD HCCCEEEEEEHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHH EFQSYGLDNRQAPYLGPVREDAQGLVQWVRVNDLLDESVRTLLFPTPPLDPARLEEQP HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCC >Mature Secondary Structure SEITAKRSAAPVAKQALFLLFRIGSERYALRATEVAEVLPRLPLKPIARAPHWVAGVFA CCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHH YRGTVVPVIDLSALTFGHPAQARTSTRLVLVHYRAEDSQPAQWLGLILEQATDTLRCNPD HCCCEEEEEEHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHH EFQSYGLDNRQAPYLGPVREDAQGLVQWVRVNDLLDESVRTLLFPTPPLDPARLEEQP HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA