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The map label for this gene is yhbQ [C]

Identifier: 77457207

GI number: 77457207

Start: 1140311

End: 1140613

Strand: Direct

Name: yhbQ [C]

Synonym: Pfl01_0980

Alternate gene names: 77457207

Gene position: 1140311-1140613 (Clockwise)

Preceding gene: 77457206

Following gene: 77457208

Centisome position: 17.71

GC content: 59.08

Gene sequence:

>303_bases
GTGAACAGCCTCAGCGAAAATCCTCTCGATGCCGACGTTTCAGTGAGCAAATCCTGGTTCGTCTACCTCGTACGCGCCGC
CAACGGTTCGCTGTACTGCGGGATCAGCGATGATCCCGTGCGCCGTTTCGCCAAGCACCAGAGCGGCAAGGGCGCGCGGT
TCTTTCTTTCAAGCCCGGCGATGGCGCTGGTCTACACCGAGCGTTGCCGCGACAAGGGTGATGCTTTGCGTCAGGAGCGG
TTGATCAAGAAGCTCAGGAAGAGTGCGAAGGAGTGTCTGGTGGCGTCTTATCGGCCTGATTGA

Upstream 100 bases:

>100_bases
GCGCAACGCTGTCCGTGCTCAGGCGCTGAAAGGGCTGAAGGCATTTCAGGCGAGTCGCTGATAAGATCGCCACCTGTTTT
TCTTACGCCTGAATTGTCCC

Downstream 100 bases:

>100_bases
GCAGGTGCAAACGGTAAAATCACTGGATGTCGAAGCACTGCCTCGGGCACACAACAGGCGAAAAAAAACCGCCTTTGCGG
AGCGGTTTTTTCTGTAAACG

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MNSLSENPLDADVSVSKSWFVYLVRAANGSLYCGISDDPVRRFAKHQSGKGARFFLSSPAMALVYTERCRDKGDALRQER
LIKKLRKSAKECLVASYRPD

Sequences:

>Translated_100_residues
MNSLSENPLDADVSVSKSWFVYLVRAANGSLYCGISDDPVRRFAKHQSGKGARFFLSSPAMALVYTERCRDKGDALRQER
LIKKLRKSAKECLVASYRPD
>Mature_100_residues
MNSLSENPLDADVSVSKSWFVYLVRAANGSLYCGISDDPVRRFAKHQSGKGARFFLSSPAMALVYTERCRDKGDALRQER
LIKKLRKSAKECLVASYRPD

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=77, Percent_Identity=45.4545454545455, Blast_Score=72, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 11245; Mature: 11245

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLSENPLDADVSVSKSWFVYLVRAANGSLYCGISDDPVRRFAKHQSGKGARFFLSSPA
CCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCHHHHHHHCCCCCCCEEEECCCC
MALVYTERCRDKGDALRQERLIKKLRKSAKECLVASYRPD
EEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNSLSENPLDADVSVSKSWFVYLVRAANGSLYCGISDDPVRRFAKHQSGKGARFFLSSPA
CCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCHHHHHHHCCCCCCCEEEECCCC
MALVYTERCRDKGDALRQERLIKKLRKSAKECLVASYRPD
EEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]