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The map label for this gene is ydhJ [H]

Identifier: 77457168

GI number: 77457168

Start: 1093625

End: 1094488

Strand: Direct

Name: ydhJ [H]

Synonym: Pfl01_0941

Alternate gene names: 77457168

Gene position: 1093625-1094488 (Clockwise)

Preceding gene: 77457167

Following gene: 77457171

Centisome position: 16.99

GC content: 60.65

Gene sequence:

>864_bases
ATGAAAAAGTTTTTCAGCCTGCTCGCGACCCTGCTGGTGCTGGCCCTGGCGCTGTGGATCGGCCGCACGTTGTGGGAGCA
CTACATGAACACCCCGTGGACCCGCGACGGCCGGGTGCGCGCCGACATCATCAATGTTGCCGCCGACGTCACCGGTGAAG
TGGTCGACGTGCCGGTCCGCGACAACCAGTTGGTGAAGAAAGGTGATCTGCTGATGCAGATCGACCCCGAGCACTACCGC
CTGGCGGTGAAACAGGCGCAGTCGCTGGTCGCTTCGCGCAAGGCCACGTGGGAGATGCGCAAGGTCAACGCCCATCGCCG
CGCCGACCTCGATAACCTGGTGATCTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCGACTCCGCACTGGCCGATT
ACCAACAGGCCCAGGCGCAACTGGAAGCGGCCGAACTCAACCTCAAACGCACCGAAGTGCGCGCGGCGGTGGACGGCTAC
GTGACCAACCTCAACGTCCATCGCGGCGATTACGCTCGTATTGGCGAAGCGAAAATGGCCGTGGTCGACATGAACTCGTT
CTGGGTCTATGGCTTCTTCGAAGAAACCAAACTGCCTCACGTGCGGGTCGGCGATAAAGCGGATATGCAACTGATGAGCG
GCGAAGTCCTCAAGGGCCATGTGGAAAGTATTTCCCGTGGTATCTACGACCGTGACAACCCGGAAAGCCGCGAGCTGATT
GCCGATGTGAACCCGACCTTCAATTGGGTGCGCCTGGCGCAACGGGTGCCGGTGCGGATTCACATCGATGAAGTGCCGGA
GGGTGTGTTGCTGGCGGCGGGGATTACCTGCACCGTTGTTGTGAAGCAGGACGTTGTCGAGTAA

Upstream 100 bases:

>100_bases
CTGTACCGCTTCTTCTGGCACCCGGCGCTGCTGCGCCTGAGCCTGTTTACCTGTCTGTTCGGCGCGATGGCGCTGACTGT
CTACCGTTGAGAACATTCTG

Downstream 100 bases:

>100_bases
TCCGATGGCGAGGGAGCAGGCTCCCTCGCCAGAACCGGAGGGTGTCAGCCCTGGCAAAACGTTTCGTGCAAATGCCGCCA
GATCACCCGTCCGGATTCGG

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKKFFSLLATLLVLALALWIGRTLWEHYMNTPWTRDGRVRADIINVAADVTGEVVDVPVRDNQLVKKGDLLMQIDPEHYR
LAVKQAQSLVASRKATWEMRKVNAHRRADLDNLVISKENRDDASNIADSALADYQQAQAQLEAAELNLKRTEVRAAVDGY
VTNLNVHRGDYARIGEAKMAVVDMNSFWVYGFFEETKLPHVRVGDKADMQLMSGEVLKGHVESISRGIYDRDNPESRELI
ADVNPTFNWVRLAQRVPVRIHIDEVPEGVLLAAGITCTVVVKQDVVE

Sequences:

>Translated_287_residues
MKKFFSLLATLLVLALALWIGRTLWEHYMNTPWTRDGRVRADIINVAADVTGEVVDVPVRDNQLVKKGDLLMQIDPEHYR
LAVKQAQSLVASRKATWEMRKVNAHRRADLDNLVISKENRDDASNIADSALADYQQAQAQLEAAELNLKRTEVRAAVDGY
VTNLNVHRGDYARIGEAKMAVVDMNSFWVYGFFEETKLPHVRVGDKADMQLMSGEVLKGHVESISRGIYDRDNPESRELI
ADVNPTFNWVRLAQRVPVRIHIDEVPEGVLLAAGITCTVVVKQDVVE
>Mature_287_residues
MKKFFSLLATLLVLALALWIGRTLWEHYMNTPWTRDGRVRADIINVAADVTGEVVDVPVRDNQLVKKGDLLMQIDPEHYR
LAVKQAQSLVASRKATWEMRKVNAHRRADLDNLVISKENRDDASNIADSALADYQQAQAQLEAAELNLKRTEVRAAVDGY
VTNLNVHRGDYARIGEAKMAVVDMNSFWVYGFFEETKLPHVRVGDKADMQLMSGEVLKGHVESISRGIYDRDNPESRELI
ADVNPTFNWVRLAQRVPVRIHIDEVPEGVLLAAGITCTVVVKQDVVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=284, Percent_Identity=44.7183098591549, Blast_Score=233, Evalue=8e-63,
Organism=Escherichia coli, GI1789637, Length=287, Percent_Identity=40.7665505226481, Blast_Score=204, Evalue=5e-54,
Organism=Escherichia coli, GI1790519, Length=290, Percent_Identity=27.5862068965517, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788711, Length=341, Percent_Identity=27.8592375366569, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789041, Length=279, Percent_Identity=25.4480286738351, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32357; Mature: 32357

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFSLLATLLVLALALWIGRTLWEHYMNTPWTRDGRVRADIINVAADVTGEVVDVPVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCC
DNQLVKKGDLLMQIDPEHYRLAVKQAQSLVASRKATWEMRKVNAHRRADLDNLVISKENR
CCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHEEEECCCC
DDASNIADSALADYQQAQAQLEAAELNLKRTEVRAAVDGYVTNLNVHRGDYARIGEAKMA
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEE
VVDMNSFWVYGFFEETKLPHVRVGDKADMQLMSGEVLKGHVESISRGIYDRDNPESRELI
EEECCCEEEEEEECCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHEE
ADVNPTFNWVRLAQRVPVRIHIDEVPEGVLLAAGITCTVVVKQDVVE
ECCCCCHHHHHHHHHCCEEEEECCCCCCEEEECCCEEEEEEECCCCC
>Mature Secondary Structure
MKKFFSLLATLLVLALALWIGRTLWEHYMNTPWTRDGRVRADIINVAADVTGEVVDVPVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCC
DNQLVKKGDLLMQIDPEHYRLAVKQAQSLVASRKATWEMRKVNAHRRADLDNLVISKENR
CCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHEEEECCCC
DDASNIADSALADYQQAQAQLEAAELNLKRTEVRAAVDGYVTNLNVHRGDYARIGEAKMA
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEE
VVDMNSFWVYGFFEETKLPHVRVGDKADMQLMSGEVLKGHVESISRGIYDRDNPESRELI
EEECCCEEEEEEECCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHEE
ADVNPTFNWVRLAQRVPVRIHIDEVPEGVLLAAGITCTVVVKQDVVE
ECCCCCHHHHHHHHHCCEEEEECCCCCCEEEECCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]