| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457154
Identifier: 77457154
GI number: 77457154
Start: 1077484
End: 1079073
Strand: Direct
Name: 77457154
Synonym: Pfl01_0927
Alternate gene names: NA
Gene position: 1077484-1079073 (Clockwise)
Preceding gene: 77457153
Following gene: 77457155
Centisome position: 16.74
GC content: 61.32
Gene sequence:
>1590_bases ATGAAAGAGGGTTTTCGGCAGGCGATGGCCTGGCTGCATACATGGACCGGGCTGGTCTTCGGCTGGCTGTTGTTCGCGAT TTTCCTGACCGGGACGCTGGCCTATTTCAAGGACGAGATCAATCACTGGATGCAGCCGGAAATCCCGTCACGCCCGCTCG ATGCCGCCGCGAGCCTGACGCTTGCTCAAACCTATCTGCAGCAGCGTGCACCCGACGCGCCGAGCTGGCAGATCACGCTT CCCGATGCGCGCGATCCCGGAATATCTGTAAGTTGGCAGCAAGCCCCGGCCAGACCCGGCGAGCGCGGCAGATTCACCGA AAAGATCCTCGACGCTCAGACCGGTGCCGAAGTGCCCGTGCGCAAAAGCTTTGGCGGCGAGTTCTTCTACCGCTTTCACT TCCAGCTGCAAATGCCTTATCCGTGGGGTCGCTGGCTGGCGACCAGCGCTGCGATGGTGATGTTCATCGCACTGATCACC GGCATCATTACCCACAAGAAAATCTTCAAGGACTTCTTTACCTTCCGTCCGCGCAAAGGCCAGCGCTCCTGGCTCGACGG ACATAACGCGGTGGGCGTGCTGGTGCTGCCTTTTCACCTGATGATCACCTACAGCAGTCTGGTGATCTTCATGGCGATGG TGATGCCGGCGAGCCTCCTGGTGTCCTATGGCAGCGATCGCAGTGCGTTTTACGACGAAGTGTTTCCCGAAGCGCCCACA CCGGAGCGCGCAGGCATACCCGCCACATTACCTGCAATGGCGCCGCTGCTGGCGCGTGCGAGCGAACAATTGGGCGGTGG TAATGTTGCGCGGGTGACCGTGATCAACCCCGGCGACGCCAATGCCTCCGTGCAGGTGGCGCGTGCCAGCTCCGACAGGA TCACCTACGAATACGGTAACGACGTGACCTTCAATGGAGTGAGCGGGCAAATCCTCGATGCGACTCCGGCCAAGCCGCTG CCGATGGCGATTGCCGGCAGTTTTTATGGTCTGCACATCGGCCACTTCGCCGGCCCGGTGCTGCGCTGGCTGTATTTCAT CTGCGGCCTGGCCGGCACGGCAATGATCGGCACCGGACTGGTGATCTGGCTCGGCAAGCGTCAGCTCAAACACGCCAAAA CCGGGGTGATGCCGTTCGAACTGCGGCTGGTCGAAGTGCTGAACATCGCCAGCATGGCCGGGCTGATCGGTGCGGTGGCG GCGTTCTTCTGGGCCAACCGTCTGTTGCCACTGAGTCTCGACGGCCGAGCCAACTGGGAAGTGAACACATTCTTCATCGC TTGGACATTGAGCCTGGTGCATGCGTTGCTCCTGCCCGGTCGCAAAGCCTGGGTCGAACAATTGACGCTGGCAGCGCTGC TGTTCACCACGGTGCCGTTGCTCAACGCGTTGACCACTGCGCATCACCTCGGCGTCACGCTGGCGCAGAAGGACTGGGCA TTGGCCGGTTTCGACCTGACCTGTCTTGCTGCCGGTCTGCTTCTGGCGTGGGCTGCCTGGAAAATGCAGCGTGCCGCTCA CACCGTCCGAGTGGAAAAAACACGTCGTGAAACGACCCGGCCGATCACGCTTGAGCAGGGGACGCGCTGA
Upstream 100 bases:
>100_bases GTTTCGCCTGTCGCACGGCGTGGTCGGCGTGGGTCGGTCTGCTGGTGCCGAGCGTGATTCTGGCGACTGTTTCCGGGGCT GCGCGCGGTCTGGGTCTGGC
Downstream 100 bases:
>100_bases TGTTGCTGGCGCTGTTGCTGTGTTACGTCGGATTCACAGCGTTGTGCCTGTCGATGCCACGGCATCACGATGAGCTGCTG GGTCGCAAGCCCTCATCCCG
Product: aspartate kinase
Products: NA
Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; Iron Uptake Protein; Aspartate Kinase; PepSY-Associated TM Helix Family Protein; PepSY-Associated Membrane Protein; Transmembrane Protein; PepSY Domain Protein; Iron-Regulated Membrane Protein DUF; Iron Regulated Protein; Pepsy-Associated Tm Helix Domain Protein; Transmembrane PepSY Domain-Containing Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MKEGFRQAMAWLHTWTGLVFGWLLFAIFLTGTLAYFKDEINHWMQPEIPSRPLDAAASLTLAQTYLQQRAPDAPSWQITL PDARDPGISVSWQQAPARPGERGRFTEKILDAQTGAEVPVRKSFGGEFFYRFHFQLQMPYPWGRWLATSAAMVMFIALIT GIITHKKIFKDFFTFRPRKGQRSWLDGHNAVGVLVLPFHLMITYSSLVIFMAMVMPASLLVSYGSDRSAFYDEVFPEAPT PERAGIPATLPAMAPLLARASEQLGGGNVARVTVINPGDANASVQVARASSDRITYEYGNDVTFNGVSGQILDATPAKPL PMAIAGSFYGLHIGHFAGPVLRWLYFICGLAGTAMIGTGLVIWLGKRQLKHAKTGVMPFELRLVEVLNIASMAGLIGAVA AFFWANRLLPLSLDGRANWEVNTFFIAWTLSLVHALLLPGRKAWVEQLTLAALLFTTVPLLNALTTAHHLGVTLAQKDWA LAGFDLTCLAAGLLLAWAAWKMQRAAHTVRVEKTRRETTRPITLEQGTR
Sequences:
>Translated_529_residues MKEGFRQAMAWLHTWTGLVFGWLLFAIFLTGTLAYFKDEINHWMQPEIPSRPLDAAASLTLAQTYLQQRAPDAPSWQITL PDARDPGISVSWQQAPARPGERGRFTEKILDAQTGAEVPVRKSFGGEFFYRFHFQLQMPYPWGRWLATSAAMVMFIALIT GIITHKKIFKDFFTFRPRKGQRSWLDGHNAVGVLVLPFHLMITYSSLVIFMAMVMPASLLVSYGSDRSAFYDEVFPEAPT PERAGIPATLPAMAPLLARASEQLGGGNVARVTVINPGDANASVQVARASSDRITYEYGNDVTFNGVSGQILDATPAKPL PMAIAGSFYGLHIGHFAGPVLRWLYFICGLAGTAMIGTGLVIWLGKRQLKHAKTGVMPFELRLVEVLNIASMAGLIGAVA AFFWANRLLPLSLDGRANWEVNTFFIAWTLSLVHALLLPGRKAWVEQLTLAALLFTTVPLLNALTTAHHLGVTLAQKDWA LAGFDLTCLAAGLLLAWAAWKMQRAAHTVRVEKTRRETTRPITLEQGTR >Mature_529_residues MKEGFRQAMAWLHTWTGLVFGWLLFAIFLTGTLAYFKDEINHWMQPEIPSRPLDAAASLTLAQTYLQQRAPDAPSWQITL PDARDPGISVSWQQAPARPGERGRFTEKILDAQTGAEVPVRKSFGGEFFYRFHFQLQMPYPWGRWLATSAAMVMFIALIT GIITHKKIFKDFFTFRPRKGQRSWLDGHNAVGVLVLPFHLMITYSSLVIFMAMVMPASLLVSYGSDRSAFYDEVFPEAPT PERAGIPATLPAMAPLLARASEQLGGGNVARVTVINPGDANASVQVARASSDRITYEYGNDVTFNGVSGQILDATPAKPL PMAIAGSFYGLHIGHFAGPVLRWLYFICGLAGTAMIGTGLVIWLGKRQLKHAKTGVMPFELRLVEVLNIASMAGLIGAVA AFFWANRLLPLSLDGRANWEVNTFFIAWTLSLVHALLLPGRKAWVEQLTLAALLFTTVPLLNALTTAHHLGVTLAQKDWA LAGFDLTCLAAGLLLAWAAWKMQRAAHTVRVEKTRRETTRPITLEQGTR
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58421; Mature: 58421
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEGFRQAMAWLHTWTGLVFGWLLFAIFLTGTLAYFKDEINHWMQPEIPSRPLDAAASLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LAQTYLQQRAPDAPSWQITLPDARDPGISVSWQQAPARPGERGRFTEKILDAQTGAEVPV HHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCC RKSFGGEFFYRFHFQLQMPYPWGRWLATSAAMVMFIALITGIITHKKIFKDFFTFRPRKG HHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QRSWLDGHNAVGVLVLPFHLMITYSSLVIFMAMVMPASLLVSYGSDRSAFYDEVFPEAPT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC PERAGIPATLPAMAPLLARASEQLGGGNVARVTVINPGDANASVQVARASSDRITYEYGN CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEECC DVTFNGVSGQILDATPAKPLPMAIAGSFYGLHIGHFAGPVLRWLYFICGLAGTAMIGTGL EEEECCCCCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VIWLGKRQLKHAKTGVMPFELRLVEVLNIASMAGLIGAVAAFFWANRLLPLSLDGRANWE EEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCE VNTFFIAWTLSLVHALLLPGRKAWVEQLTLAALLFTTVPLLNALTTAHHLGVTLAQKDWA EEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCE LAGFDLTCLAAGLLLAWAAWKMQRAAHTVRVEKTRRETTRPITLEQGTR ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC >Mature Secondary Structure MKEGFRQAMAWLHTWTGLVFGWLLFAIFLTGTLAYFKDEINHWMQPEIPSRPLDAAASLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LAQTYLQQRAPDAPSWQITLPDARDPGISVSWQQAPARPGERGRFTEKILDAQTGAEVPV HHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCC RKSFGGEFFYRFHFQLQMPYPWGRWLATSAAMVMFIALITGIITHKKIFKDFFTFRPRKG HHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QRSWLDGHNAVGVLVLPFHLMITYSSLVIFMAMVMPASLLVSYGSDRSAFYDEVFPEAPT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC PERAGIPATLPAMAPLLARASEQLGGGNVARVTVINPGDANASVQVARASSDRITYEYGN CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEECC DVTFNGVSGQILDATPAKPLPMAIAGSFYGLHIGHFAGPVLRWLYFICGLAGTAMIGTGL EEEECCCCCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VIWLGKRQLKHAKTGVMPFELRLVEVLNIASMAGLIGAVAAFFWANRLLPLSLDGRANWE EEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCE VNTFFIAWTLSLVHALLLPGRKAWVEQLTLAALLFTTVPLLNALTTAHHLGVTLAQKDWA EEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCE LAGFDLTCLAAGLLLAWAAWKMQRAAHTVRVEKTRRETTRPITLEQGTR ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA