| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pcaK [H]
Identifier: 77457140
GI number: 77457140
Start: 1063616
End: 1065013
Strand: Direct
Name: pcaK [H]
Synonym: Pfl01_0913
Alternate gene names: 77457140
Gene position: 1063616-1065013 (Clockwise)
Preceding gene: 77457139
Following gene: 77457142
Centisome position: 16.52
GC content: 62.23
Gene sequence:
>1398_bases ATGCATAACCAGATTGCCAGCTTTCGGGCGGCACTCGACGCCCGTCCTGTGTCCCGCTTTCAGTGGTTGCTCCTGATTCT TCTCGCCTTGCTGCTGGTCACCGACGGCTATGACGCCCAGGTGCTCGGTTACGTGGTGCCGGCACTGGCGCAGGACTGGG GCCTGGAAAAATCCGCATTCGGTCCGGTATTCAGCGCCAACCTTCTGGGCCTGACCCTCGGTTCGCTCGCCGTGACGCCG CTGGCCGATCGCTTCGGCGTTCGACGGATTCTGCTCGCCTGCGTGCTGATCTACGCCAGCCTCACCGTGCTGATGGTGTT CGCCGATTCCCTGAATACCCTGATGATCGCGCGTTTCATCTGCGGCATCGGCATGGGCGGCGCGATGCCCAGCGCCATGG CGTTGATGTCGGAATATTCACCGCCACGCCTGCGTACGCTGATGGTGACGCTGGCGGCCTGCGGTTTTTCTTTCGGCGGT GCGGCGGGTGGTTTTGTCGCGGCCGGTTTCATTGACCGTTTCGGTTGGCAAGCGGTGTTCCTCGCCGGCGGTGTCACGCC GTTGCTGTTGTTCCCGTTTCTCTGGTGGATGCTGCCGGAATCCTTGCCACGACTGCTGCGTGACGCACCACCCTATGCGC GCCTGCGCAAAGTCACCGCGCGAATGCTGCCAGACTGGCAACCGCCCGCCGCATCGGTTGAGCAGAATGAGCGCGAGCAG GGCAGCAAACTGACCGTGGTGGAGTTGTTCCGCAATGGTTACGCCCGTCCGACCTTGCTGATCTGGGCGACGTTTTTCGT CAGCCTGATCCTGCTGTATTTCATGATCAGCTGGCTGCCGTCGCTGCTGCTCGAAAGCGGGCTGAAACTCAATGAAGCGA ACCTGGTGACGTCGATGTTCCTGTTCGCCGGCACGCTCGGCGCGATCTGCATGGCGTGGTTCGCCGACCGCTTGAAAAGC AAGGTGCGACTGCTGTCCGGCGTGTTGGCCGGCGCGGCGGTGTGCACGATCCTGCTGGGCCTGAACCACGACAATCCGCG TTATCTGGTGGCCTGTGTGTTTACGGCGGGGTTTTGCATCATTGGCGGGCAACTGACGCTCAATGCGTTCGCCAGCAATT TCTATCCGGCCCACGTGCGCGCTACCGGCACCGGCTGGGCATTGGGAGTAGGGCGGTTCGGCTCGATTCTCGGGCCGCTG TTCGGCAGCCTGTTGCTGGCAACGCACATTCCGGTGGAGCAGATTTTCTTCTTCTGCGCGATTCCGGCGGTGATTGCGGC GTTGCTGATCATTCAGGTGCGTTCGCCAGCCACTGCGCTGTTCAGTGGACAACCGCGTTCGGTGGCAGATGGCCCAGCCG TTCCGTCAGGCGAAGTCGCTGAATCGGGTCGTCGCTGA
Upstream 100 bases:
>100_bases GCCGGACACGCCGAAGTAGCATTTGATGGCTCCCGTGCAGCGCACGGGAGCCATTACGGTTACCCGCAAAAAATCATAAA AACAAAACAGGTACCTTGCG
Downstream 100 bases:
>100_bases GCAATAGCGCATGCTCCAGATCGAAACGCTCGGCGTTCGGGCAATCGAGACGCTGGTACAGACTGGCCCGCGCCAGGTAG TCGGCGGCGCTGGCGTTGCC
Product: general substrate transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MHNQIASFRAALDARPVSRFQWLLLILLALLLVTDGYDAQVLGYVVPALAQDWGLEKSAFGPVFSANLLGLTLGSLAVTP LADRFGVRRILLACVLIYASLTVLMVFADSLNTLMIARFICGIGMGGAMPSAMALMSEYSPPRLRTLMVTLAACGFSFGG AAGGFVAAGFIDRFGWQAVFLAGGVTPLLLFPFLWWMLPESLPRLLRDAPPYARLRKVTARMLPDWQPPAASVEQNEREQ GSKLTVVELFRNGYARPTLLIWATFFVSLILLYFMISWLPSLLLESGLKLNEANLVTSMFLFAGTLGAICMAWFADRLKS KVRLLSGVLAGAAVCTILLGLNHDNPRYLVACVFTAGFCIIGGQLTLNAFASNFYPAHVRATGTGWALGVGRFGSILGPL FGSLLLATHIPVEQIFFFCAIPAVIAALLIIQVRSPATALFSGQPRSVADGPAVPSGEVAESGRR
Sequences:
>Translated_465_residues MHNQIASFRAALDARPVSRFQWLLLILLALLLVTDGYDAQVLGYVVPALAQDWGLEKSAFGPVFSANLLGLTLGSLAVTP LADRFGVRRILLACVLIYASLTVLMVFADSLNTLMIARFICGIGMGGAMPSAMALMSEYSPPRLRTLMVTLAACGFSFGG AAGGFVAAGFIDRFGWQAVFLAGGVTPLLLFPFLWWMLPESLPRLLRDAPPYARLRKVTARMLPDWQPPAASVEQNEREQ GSKLTVVELFRNGYARPTLLIWATFFVSLILLYFMISWLPSLLLESGLKLNEANLVTSMFLFAGTLGAICMAWFADRLKS KVRLLSGVLAGAAVCTILLGLNHDNPRYLVACVFTAGFCIIGGQLTLNAFASNFYPAHVRATGTGWALGVGRFGSILGPL FGSLLLATHIPVEQIFFFCAIPAVIAALLIIQVRSPATALFSGQPRSVADGPAVPSGEVAESGRR >Mature_465_residues MHNQIASFRAALDARPVSRFQWLLLILLALLLVTDGYDAQVLGYVVPALAQDWGLEKSAFGPVFSANLLGLTLGSLAVTP LADRFGVRRILLACVLIYASLTVLMVFADSLNTLMIARFICGIGMGGAMPSAMALMSEYSPPRLRTLMVTLAACGFSFGG AAGGFVAAGFIDRFGWQAVFLAGGVTPLLLFPFLWWMLPESLPRLLRDAPPYARLRKVTARMLPDWQPPAASVEQNEREQ GSKLTVVELFRNGYARPTLLIWATFFVSLILLYFMISWLPSLLLESGLKLNEANLVTSMFLFAGTLGAICMAWFADRLKS KVRLLSGVLAGAAVCTILLGLNHDNPRYLVACVFTAGFCIIGGQLTLNAFASNFYPAHVRATGTGWALGVGRFGSILGPL FGSLLLATHIPVEQIFFFCAIPAVIAALLIIQVRSPATALFSGQPRSVADGPAVPSGEVAESGRR
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI166064021, Length=454, Percent_Identity=25.3303964757709, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI24308167, Length=451, Percent_Identity=23.5033259423503, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI7662270, Length=170, Percent_Identity=28.8235294117647, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI8923870, Length=384, Percent_Identity=25.78125, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI24497490, Length=344, Percent_Identity=25, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87081723, Length=384, Percent_Identity=33.3333333333333, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1788068, Length=444, Percent_Identity=24.3243243243243, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI87082404, Length=383, Percent_Identity=23.4986945169713, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786229, Length=368, Percent_Identity=24.4565217391304, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082231, Length=415, Percent_Identity=22.6506024096386, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI87082159, Length=391, Percent_Identity=25.3196930946292, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1788074, Length=413, Percent_Identity=20.8232445520581, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082320, Length=363, Percent_Identity=21.763085399449, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1787880, Length=157, Percent_Identity=27.3885350318471, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI32564663, Length=418, Percent_Identity=23.6842105263158, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560496, Length=403, Percent_Identity=22.5806451612903, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24640198, Length=477, Percent_Identity=21.5932914046122, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24640196, Length=477, Percent_Identity=21.5932914046122, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24640200, Length=477, Percent_Identity=21.5932914046122, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI19922616, Length=349, Percent_Identity=23.7822349570201, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50055; Mature: 50055
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNQIASFRAALDARPVSRFQWLLLILLALLLVTDGYDAQVLGYVVPALAQDWGLEKSAF CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHC GPVFSANLLGLTLGSLAVTPLADRFGVRRILLACVLIYASLTVLMVFADSLNTLMIARFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGIGMGGAMPSAMALMSEYSPPRLRTLMVTLAACGFSFGGAAGGFVAAGFIDRFGWQAVF HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH LAGGVTPLLLFPFLWWMLPESLPRLLRDAPPYARLRKVTARMLPDWQPPAASVEQNEREQ HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHC GSKLTVVELFRNGYARPTLLIWATFFVSLILLYFMISWLPSLLLESGLKLNEANLVTSMF CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LFAGTLGAICMAWFADRLKSKVRLLSGVLAGAAVCTILLGLNHDNPRYLVACVFTAGFCI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IGGQLTLNAFASNFYPAHVRATGTGWALGVGRFGSILGPLFGSLLLATHIPVEQIFFFCA CCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IPAVIAALLIIQVRSPATALFSGQPRSVADGPAVPSGEVAESGRR HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure MHNQIASFRAALDARPVSRFQWLLLILLALLLVTDGYDAQVLGYVVPALAQDWGLEKSAF CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHC GPVFSANLLGLTLGSLAVTPLADRFGVRRILLACVLIYASLTVLMVFADSLNTLMIARFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGIGMGGAMPSAMALMSEYSPPRLRTLMVTLAACGFSFGGAAGGFVAAGFIDRFGWQAVF HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH LAGGVTPLLLFPFLWWMLPESLPRLLRDAPPYARLRKVTARMLPDWQPPAASVEQNEREQ HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHC GSKLTVVELFRNGYARPTLLIWATFFVSLILLYFMISWLPSLLLESGLKLNEANLVTSMF CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LFAGTLGAICMAWFADRLKSKVRLLSGVLAGAAVCTILLGLNHDNPRYLVACVFTAGFCI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IGGQLTLNAFASNFYPAHVRATGTGWALGVGRFGSILGPLFGSLLLATHIPVEQIFFFCA CCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IPAVIAALLIIQVRSPATALFSGQPRSVADGPAVPSGEVAESGRR HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]