| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457116
Identifier: 77457116
GI number: 77457116
Start: 1036175
End: 1036537
Strand: Reverse
Name: 77457116
Synonym: Pfl01_0889
Alternate gene names: NA
Gene position: 1036537-1036175 (Counterclockwise)
Preceding gene: 77457117
Following gene: 77457115
Centisome position: 16.1
GC content: 60.61
Gene sequence:
>363_bases GTGTCTGGCGCTCCGGGCGTCAGACTTTTATCATCCGCGCCACGATTTGACTGCACAGAGCCCATCATGACCGAGCAACA ACGCCTCGAACTCGAAGCCGCCGCCTTCCGCCGGCTGGTCGCACACCTGGACAGCCGCAAGGACGTGCAGAACATCGACC TGATGAACCTCGCCGGGTTTTGCCGCAACTGCCTGTCCAAGTGGTACAAGGCCGAGGCCGACGAGCGCCGGATCGAGGTC AGCCTCGACGATGCCCGTGAAGTGGTTTACGGCATGCCGTACGCCGACTGGAAAGCCCAATATCAGCAAGAAGCCAGCGC CGAACAGCAAGCGGCGTTTGCCAAAGGAAAACCCAATGAGTGA
Upstream 100 bases:
>100_bases CCAACGAATCGGTGCTGTACGCCGAAGTCGAAGTCGACAAGCCGCATGCCTTGCGATTTGCCGAATCGGTGTCGATCACC CTCGCGGCCAGCCGCTGAAC
Downstream 100 bases:
>100_bases TCTGAACACCCTGCGCGCCAGCCTCAAGAGCGGCGAACACGTTTTTGCCGACACCCTGTCGTTCATCGCCGCCGGTTACG ACTACCAGCCGCAGGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSGAPGVRLLSSAPRFDCTEPIMTEQQRLELEAAAFRRLVAHLDSRKDVQNIDLMNLAGFCRNCLSKWYKAEADERRIEV SLDDAREVVYGMPYADWKAQYQQEASAEQQAAFAKGKPNE
Sequences:
>Translated_120_residues MSGAPGVRLLSSAPRFDCTEPIMTEQQRLELEAAAFRRLVAHLDSRKDVQNIDLMNLAGFCRNCLSKWYKAEADERRIEV SLDDAREVVYGMPYADWKAQYQQEASAEQQAAFAKGKPNE >Mature_119_residues SGAPGVRLLSSAPRFDCTEPIMTEQQRLELEAAAFRRLVAHLDSRKDVQNIDLMNLAGFCRNCLSKWYKAEADERRIEVS LDDAREVVYGMPYADWKAQYQQEASAEQQAAFAKGKPNE
Specific function: Unknown
COG id: COG3492
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13613; Mature: 13482
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAPGVRLLSSAPRFDCTEPIMTEQQRLELEAAAFRRLVAHLDSRKDVQNIDLMNLAGF CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHH CRNCLSKWYKAEADERRIEVSLDDAREVVYGMPYADWKAQYQQEASAEQQAAFAKGKPNE HHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SGAPGVRLLSSAPRFDCTEPIMTEQQRLELEAAAFRRLVAHLDSRKDVQNIDLMNLAGF CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHH CRNCLSKWYKAEADERRIEVSLDDAREVVYGMPYADWKAQYQQEASAEQQAAFAKGKPNE HHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA