| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457087
Identifier: 77457087
GI number: 77457087
Start: 1008409
End: 1008981
Strand: Reverse
Name: 77457087
Synonym: Pfl01_0860
Alternate gene names: NA
Gene position: 1008981-1008409 (Counterclockwise)
Preceding gene: 77457088
Following gene: 77457086
Centisome position: 15.67
GC content: 55.67
Gene sequence:
>573_bases ATGTTTAGCAAAAAGTTTCGCAACATCCTGCTGTTCGGTTGCATCGCAGCGATTTTCGGTGCGGTGGGCTACTGGAACAT CAGCCCTGAGCGCTTTCTCGACAAGCCCCCCGTCTCGGCGGCGGAGAGCCCGATCGACTGGTATGCGACCAATACTCACA CGATCCAGTACCTTGAAGACGGCAAAGTGCAGTACGAAATGACGTCCGAGAAGGCAGAGCACGTCAAGGTGACCGACATT ACACTGGTCACCAAGCCCGATCTGAACATGTTCCGCGGCACCGATTTCCCATGGCACGTGACCAGTGAACGCGGTGAAGT GAACTCCGGTGGCACCGAGGTCGAGTTGATCGACTCGGTACGCGTCAAGCGCACCGACGAAAAGAACCGCGACACCTTGA TCACCTCCACTCGCATGACGGTGTTCCCGCAGCAGCAATATGCGCAGACCCAGCAACCCGTTAGAATCGACGGCGCTGGC GGTGTATCGACTGGCGTGGGAATGAAAGCGTATTTGAAGGAAAGCAGGATACACCTGCTATCGAACGTAAGAGGACAGTA TGAGGCTCGTTAA
Upstream 100 bases:
>100_bases CCCGCGGCGGCGAAGGTGCCGCCCGCGAATTCTGCGAACTGATCCTGCGCGCCCAAGGCAGCCTCGACGCCGCCAACAAC GCGTACCTGTGAGTCCAACC
Downstream 100 bases:
>100_bases AACCCTCCCTATTTTGCTCAGTCTGGGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGAACGATAGTCAGCAAC CGATCCGCATCCAGGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MFSKKFRNILLFGCIAAIFGAVGYWNISPERFLDKPPVSAAESPIDWYATNTHTIQYLEDGKVQYEMTSEKAEHVKVTDI TLVTKPDLNMFRGTDFPWHVTSERGEVNSGGTEVELIDSVRVKRTDEKNRDTLITSTRMTVFPQQQYAQTQQPVRIDGAG GVSTGVGMKAYLKESRIHLLSNVRGQYEAR
Sequences:
>Translated_190_residues MFSKKFRNILLFGCIAAIFGAVGYWNISPERFLDKPPVSAAESPIDWYATNTHTIQYLEDGKVQYEMTSEKAEHVKVTDI TLVTKPDLNMFRGTDFPWHVTSERGEVNSGGTEVELIDSVRVKRTDEKNRDTLITSTRMTVFPQQQYAQTQQPVRIDGAG GVSTGVGMKAYLKESRIHLLSNVRGQYEAR >Mature_190_residues MFSKKFRNILLFGCIAAIFGAVGYWNISPERFLDKPPVSAAESPIDWYATNTHTIQYLEDGKVQYEMTSEKAEHVKVTDI TLVTKPDLNMFRGTDFPWHVTSERGEVNSGGTEVELIDSVRVKRTDEKNRDTLITSTRMTVFPQQQYAQTQQPVRIDGAG GVSTGVGMKAYLKESRIHLLSNVRGQYEAR
Specific function: Unknown
COG id: COG3117
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21467; Mature: 21467
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKKFRNILLFGCIAAIFGAVGYWNISPERFLDKPPVSAAESPIDWYATNTHTIQYLED CCCHHHHHHHHHHHHHHHHHHCEECCCCHHHHCCCCCCCCCCCCCEEEECCCEEEEEEEC GKVQYEMTSEKAEHVKVTDITLVTKPDLNMFRGTDFPWHVTSERGEVNSGGTEVELIDSV CEEEEEECCCCCCEEEEEEEEEEECCCCHHHCCCCCCEEEECCCCCCCCCCCEEEEECCE RVKRTDEKNRDTLITSTRMTVFPQQQYAQTQQPVRIDGAGGVSTGVGMKAYLKESRIHLL EEECCCCCCCCEEEEECEEEECCCHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH SNVRGQYEAR HHCCCCCCCC >Mature Secondary Structure MFSKKFRNILLFGCIAAIFGAVGYWNISPERFLDKPPVSAAESPIDWYATNTHTIQYLED CCCHHHHHHHHHHHHHHHHHHCEECCCCHHHHCCCCCCCCCCCCCEEEECCCEEEEEEEC GKVQYEMTSEKAEHVKVTDITLVTKPDLNMFRGTDFPWHVTSERGEVNSGGTEVELIDSV CEEEEEECCCCCCEEEEEEEEEEECCCCHHHCCCCCCEEEECCCCCCCCCCCEEEEECCE RVKRTDEKNRDTLITSTRMTVFPQQQYAQTQQPVRIDGAGGVSTGVGMKAYLKESRIHLL EEECCCCCCCCEEEEECEEEECCCHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH SNVRGQYEAR HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA