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The map label for this gene is dppC [H]

Identifier: 77457038

GI number: 77457038

Start: 955964

End: 956890

Strand: Reverse

Name: dppC [H]

Synonym: Pfl01_0811

Alternate gene names: 77457038

Gene position: 956890-955964 (Counterclockwise)

Preceding gene: 77457039

Following gene: 77457037

Centisome position: 14.86

GC content: 64.72

Gene sequence:

>927_bases
ATGAGCACTCCAACTTCCTCAGTAGCCACCGCTGCCACCGCCGTGGATCAAAGTCTGCTGTACCCGTCTCCGTACAAAGA
GTTCTGGCAGGCCTTCGCCAAGAACAAGGGCGCCGTCGCCGGCCTGCTGTTCATGCTGCTGGTGATTTTCTGCGCGATCT
TCGCGCCGTGGGTCGCCCCGCATAACCCGAGCGAGCAATACCGCGACTTCCTGCTGACGCCGCCGGCGTGGCTCGAAGGC
GGGCAGATGCAATTCCTGCTCGGCACCGATGAACTGGGCCGCGACCTGCTGTCGCGTCTGATCCAGGGTTCGCGCCTGTC
GCTGCTGATCGGCCTGTCGTCGGTGGTGATGTCGCTGATCCCGGGGATCCTGCTGGGTCTGTTCGCCGGTTTCTTCCCGA
AAGTGGTCGGCCCGACCATCATGCGTCTGATGGACATCATGCTGGCCCTGCCGTCGCTGCTGCTGGCCGTGGCGATCGTC
GCCATCCTCGGCCCAGGCCTGATCAACACCGTGATCGCGATTGCCGTGGTGTCCTTGCCGTCCTACGTGCGTCTGACCCG
TGCCGCCGTGATGGGTGAACTGAACCGCGACTACGTGACCGCCGCGCGCCTGGCCGGTGCCGGTCTGCCACGCCTGATGT
TCATCACCGTGCTGCCGAACTGCATGGCACCGCTGATCGTTCAGGCGACCCTGAGCTTCTCCTCGGCGATCCTCGATGCC
GCCGCCCTGGGCTTCCTCGGCCTCGGCGTCCAGCCGCCAACCCCTGAGTGGGGCACCATGCTGGCTTCGGCCCGCGACTA
CATCGAACGCGCCTGGTGGGTGGTGAGTCTGCCTGGTTTGACCATTTTGCTCAGCGTGCTGGCAATCAACTTGATGGGCG
ACGGCCTGCGCGATGCGCTGGACCCGAAACTCAAGAACGCCGCCTGA

Upstream 100 bases:

>100_bases
TGTTAATCGCCTGCCTGGTGATTCTGGTCAACTTCGTGGTGGATATCCTCTACGGCTTTGCCAACCCACGCATCCGTCAT
CAGCGCTGAGGTCAATACCC

Downstream 100 bases:

>100_bases
GGAGATTCCCATGTCACTGTTAGAAATCAAGAATCTCAACGTTCGCTTCGGCGACAAGAACGCCACCCCGGTCGTCGACG
GCCTCGACCTGAAAGTCGAC

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSTPTSSVATAATAVDQSLLYPSPYKEFWQAFAKNKGAVAGLLFMLLVIFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEG
GQMQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPKVVGPTIMRLMDIMLALPSLLLAVAIV
AILGPGLINTVIAIAVVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDA
AALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLKNAA

Sequences:

>Translated_308_residues
MSTPTSSVATAATAVDQSLLYPSPYKEFWQAFAKNKGAVAGLLFMLLVIFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEG
GQMQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPKVVGPTIMRLMDIMLALPSLLLAVAIV
AILGPGLINTVIAIAVVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDA
AALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLKNAA
>Mature_307_residues
STPTSSVATAATAVDQSLLYPSPYKEFWQAFAKNKGAVAGLLFMLLVIFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEGG
QMQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPKVVGPTIMRLMDIMLALPSLLLAVAIVA
ILGPGLINTVIAIAVVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDAA
ALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLKNAA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=284, Percent_Identity=65.4929577464789, Blast_Score=333, Evalue=7e-93,
Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=41.696113074205, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=44.5283018867925, Blast_Score=213, Evalue=9e-57,
Organism=Escherichia coli, GI1787549, Length=279, Percent_Identity=40.8602150537634, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI1789889, Length=258, Percent_Identity=39.922480620155, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1787498, Length=282, Percent_Identity=29.7872340425532, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1788505, Length=221, Percent_Identity=28.0542986425339, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32832; Mature: 32700

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPTSSVATAATAVDQSLLYPSPYKEFWQAFAKNKGAVAGLLFMLLVIFCAIFAPWVAP
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
HNPSEQYRDFLLTPPAWLEGGQMQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLI
CCCCHHHHHHCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
PGILLGLFAGFFPKVVGPTIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAVVSLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDA
HHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDAL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
DPKLKNAA
CCCCCCCC
>Mature Secondary Structure 
STPTSSVATAATAVDQSLLYPSPYKEFWQAFAKNKGAVAGLLFMLLVIFCAIFAPWVAP
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
HNPSEQYRDFLLTPPAWLEGGQMQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLI
CCCCHHHHHHCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
PGILLGLFAGFFPKVVGPTIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAVVSLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDA
HHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDAL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
DPKLKNAA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]