| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456964
Identifier: 77456964
GI number: 77456964
Start: 863741
End: 864433
Strand: Reverse
Name: 77456964
Synonym: Pfl01_0737
Alternate gene names: NA
Gene position: 864433-863741 (Counterclockwise)
Preceding gene: 77456969
Following gene: 77456963
Centisome position: 13.43
GC content: 44.73
Gene sequence:
>693_bases TTGGCTGGCCCCAAAATACGCTTTCGGACACCATTCGAACCGGAAGCGAAGACATCTTCTATTGCTCATTCCGCCCTATG TGGTGGCCTGGCTGATACCCGTCCCTCAATCCGCATTGCTGTCCACGTACCGATTCCAGTTAGACTGGAGCTAATCATTG CCAACCAGACTGTGAAGTCGATGAACGAAAAAAACTACGAAGCACTAAAGCATAAAAATTCTAAAGATCTCGAGCTCTTG AAATGGCAATTCAAAAAAGAAGAGCTCAGCTACGTTGAAGCTGGGCAACACTTAAGATCACTAAACCAGCAGCTGTGGCA GGTACCTAGTATGGTTATTGCCATAACTGGAGGCATCTGGTTTGGAGCAGCTTCCATAACTAGCGACATGCCAAAAGTAC TTGCGTTATCTTTCGCGGCGGCTGTGAACATTCTGACGATCCCGATCATCATTCGGCTCAGACACCTAATTCAAAAATAT ATAAAACTGCAGCTTGCATTCATGAACAAGGAAGACGGCAAAGGAGGTCGAACAGTTATCACTTGCTGGATTTTACTACT ATCGATTGCGGCTTGTTTGAGCATCGCGGGCGCTAGTCATACCGACAAGATCAATATTGAAACCAAAAAAACAGAACCTT CTGCAACAGAAGTCCATCTTCACCTTCAAAAGATAGAAGTATTTATCCAATGA
Upstream 100 bases:
>100_bases AGCTAGGCCATGCTCATCAGCGTCGGGCCATCTGCAAAAGGTACTCGTTGCTTGACCTCTAGCGCTGAACGAGCTCCCGG TCCGCATCGACAGTTAGCGT
Downstream 100 bases:
>100_bases CGACAAAAAATATTAACTCCTGGGCAAACTATGACGCCGAAAGCTCTCTGTACTTCGAAAATTACAACAAGGTATACTTC TCCAATGTTCATAGACAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAGPKIRFRTPFEPEAKTSSIAHSALCGGLADTRPSIRIAVHVPIPVRLELIIANQTVKSMNEKNYEALKHKNSKDLELL KWQFKKEELSYVEAGQHLRSLNQQLWQVPSMVIAITGGIWFGAASITSDMPKVLALSFAAAVNILTIPIIIRLRHLIQKY IKLQLAFMNKEDGKGGRTVITCWILLLSIAACLSIAGASHTDKINIETKKTEPSATEVHLHLQKIEVFIQ
Sequences:
>Translated_230_residues MAGPKIRFRTPFEPEAKTSSIAHSALCGGLADTRPSIRIAVHVPIPVRLELIIANQTVKSMNEKNYEALKHKNSKDLELL KWQFKKEELSYVEAGQHLRSLNQQLWQVPSMVIAITGGIWFGAASITSDMPKVLALSFAAAVNILTIPIIIRLRHLIQKY IKLQLAFMNKEDGKGGRTVITCWILLLSIAACLSIAGASHTDKINIETKKTEPSATEVHLHLQKIEVFIQ >Mature_229_residues AGPKIRFRTPFEPEAKTSSIAHSALCGGLADTRPSIRIAVHVPIPVRLELIIANQTVKSMNEKNYEALKHKNSKDLELLK WQFKKEELSYVEAGQHLRSLNQQLWQVPSMVIAITGGIWFGAASITSDMPKVLALSFAAAVNILTIPIIIRLRHLIQKYI KLQLAFMNKEDGKGGRTVITCWILLLSIAACLSIAGASHTDKINIETKKTEPSATEVHLHLQKIEVFIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25594; Mature: 25463
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPKIRFRTPFEPEAKTSSIAHSALCGGLADTRPSIRIAVHVPIPVRLELIIANQTVKS CCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEEECHHHHH MNEKNYEALKHKNSKDLELLKWQFKKEELSYVEAGQHLRSLNQQLWQVPSMVIAITGGIW HCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH FGAASITSDMPKVLALSFAAAVNILTIPIIIRLRHLIQKYIKLQLAFMNKEDGKGGRTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHH TCWILLLSIAACLSIAGASHTDKINIETKKTEPSATEVHLHLQKIEVFIQ HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHEEEEEHEEEECC >Mature Secondary Structure AGPKIRFRTPFEPEAKTSSIAHSALCGGLADTRPSIRIAVHVPIPVRLELIIANQTVKS CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEEECHHHHH MNEKNYEALKHKNSKDLELLKWQFKKEELSYVEAGQHLRSLNQQLWQVPSMVIAITGGIW HCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH FGAASITSDMPKVLALSFAAAVNILTIPIIIRLRHLIQKYIKLQLAFMNKEDGKGGRTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHH TCWILLLSIAACLSIAGASHTDKINIETKKTEPSATEVHLHLQKIEVFIQ HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHEEEEEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA