Click here to switch to the map view.

The map label for this gene is ycaK [C]

Identifier: 77456942

GI number: 77456942

Start: 843112

End: 843687

Strand: Reverse

Name: ycaK [C]

Synonym: Pfl01_0714

Alternate gene names: 77456942

Gene position: 843687-843112 (Counterclockwise)

Preceding gene: 77456943

Following gene: 77456941

Centisome position: 13.1

GC content: 61.63

Gene sequence:

>576_bases
ATGGGCAAGCGGATTCTGCTGATTCTCGGCCATCCATCCAATGAAAGTTTTTGCGCGGCACTGGCCGGACGCTACGCTCT
ATCGGCCCGAGCGGCCGGGCACGAAGTACGGGAAATCGTACTCGGCCAACTCGATTTCGACCCGATCCTGCGCGAAGGCT
ACCGTCAGGTTCAAACCCTTGAACCGGATCTGCTCCAGGCTCAGGCCGACCTGCTGTGGGCCGAACATCTGACGCTGGTG
TACCCGATCTGGTGGGGTGGAATTCCGGCACTGCTCAAAGGTTTTTTCGACCGGGTCCTGCTCCCCGGTTTCGCGTTCAA
ATACCGCGCGGGCAAAGCGTTTCCCGACAAGCTCCTGCACGGTCGCAGCGCCCATTTGCTGGTCACCATGGACACCCCGC
CCTGGTATTACCGCTGGATCTATCGCATGCCCGGCCTGCACGAAGTACGAAGGAACACGCTGGCGTTCTGCGGTATCGAA
CCACGCCGGACGCTGACCTTCGGGCCGGTGCTCGGCGCCAGCGACCATCAGCGCGAAAGCTGGCTGAAGCAGGCCGGATC
GATTGCCCGGCATTGA

Upstream 100 bases:

>100_bases
CGCCGCTCTCCCCGCTTATGCCCGCGCCTTGCTCGACGCCTTGACTCTGCCCTGAGGGGCAGACTTTACCCTTGGGGTTT
CTTCTTCAAGGACAGTGATT

Downstream 100 bases:

>100_bases
GTTTTCCGCTATTGGTGCGTGAGCCCGCCGACGGAGAAAAGGGATTTGCACATGTACATCGGCCAGGCCGCACAGCGTTC
GGGAACCACGATCAAGACCA

Product: NAD(P)H dehydrogenase (quinone)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MGKRILLILGHPSNESFCAALAGRYALSARAAGHEVREIVLGQLDFDPILREGYRQVQTLEPDLLQAQADLLWAEHLTLV
YPIWWGGIPALLKGFFDRVLLPGFAFKYRAGKAFPDKLLHGRSAHLLVTMDTPPWYYRWIYRMPGLHEVRRNTLAFCGIE
PRRTLTFGPVLGASDHQRESWLKQAGSIARH

Sequences:

>Translated_191_residues
MGKRILLILGHPSNESFCAALAGRYALSARAAGHEVREIVLGQLDFDPILREGYRQVQTLEPDLLQAQADLLWAEHLTLV
YPIWWGGIPALLKGFFDRVLLPGFAFKYRAGKAFPDKLLHGRSAHLLVTMDTPPWYYRWIYRMPGLHEVRRNTLAFCGIE
PRRTLTFGPVLGASDHQRESWLKQAGSIARH
>Mature_190_residues
GKRILLILGHPSNESFCAALAGRYALSARAAGHEVREIVLGQLDFDPILREGYRQVQTLEPDLLQAQADLLWAEHLTLVY
PIWWGGIPALLKGFFDRVLLPGFAFKYRAGKAFPDKLLHGRSAHLLVTMDTPPWYYRWIYRMPGLHEVRRNTLAFCGIEP
RRTLTFGPVLGASDHQRESWLKQAGSIARH

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Escherichia coli, GI1787129, Length=110, Percent_Identity=30, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 21715; Mature: 21583

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRILLILGHPSNESFCAALAGRYALSARAAGHEVREIVLGQLDFDPILREGYRQVQTL
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
EPDLLQAQADLLWAEHLTLVYPIWWGGIPALLKGFFDRVLLPGFAFKYRAGKAFPDKLLH
CHHHHHHHHHHHHHHHHHEEEEHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHC
GRSAHLLVTMDTPPWYYRWIYRMPGLHEVRRNTLAFCGIEPRRTLTFGPVLGASDHQRES
CCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHEEEECCCCCCEEEECCCCCCCCHHHHH
WLKQAGSIARH
HHHHHHHHCCC
>Mature Secondary Structure 
GKRILLILGHPSNESFCAALAGRYALSARAAGHEVREIVLGQLDFDPILREGYRQVQTL
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
EPDLLQAQADLLWAEHLTLVYPIWWGGIPALLKGFFDRVLLPGFAFKYRAGKAFPDKLLH
CHHHHHHHHHHHHHHHHHEEEEHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHC
GRSAHLLVTMDTPPWYYRWIYRMPGLHEVRRNTLAFCGIEPRRTLTFGPVLGASDHQRES
CCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHEEEECCCCCCEEEECCCCCCCCHHHHH
WLKQAGSIARH
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]