| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456881
Identifier: 77456881
GI number: 77456881
Start: 764620
End: 766299
Strand: Reverse
Name: 77456881
Synonym: Pfl01_0653
Alternate gene names: NA
Gene position: 766299-764620 (Counterclockwise)
Preceding gene: 77456882
Following gene: 77456880
Centisome position: 11.9
GC content: 65.48
Gene sequence:
>1680_bases ATGAAAACTCAAGAGTGGTGCAAATCGGCAACAGCGCTGACATTGATTCTTTCCCTGAGCCTGGCCGGCTGCAGCAGCGG CGGTGGCGGTCATCACAGCAGTTCCGGCAGCTCCTCCCCGGACAGCGCCGCCGCGGGCAGTGGTGGTACGGGCGCAACCG GAGGCACGGGTGACACAGCCGGGACTGGCGGAACAGGTGGAACGGGCAACACCGGTGGTACGGGTGGAACCGGCGGGACC GGGACTGGTGGCACGGCTGGCACTGGTGGTACCGGAGGAACCGGTGGCACGGGCGGTACCGACCCGACCAATCCAACTGA TCCGACTGACCCAACGAACCCGACCAACCCCACCACCCCTACGCTGGTGACGACCACCCTGGTACAGGATGTCGGCAACA CCGTCAGTGGTGTGGGCGATGGTGTCGGCCAGGTGGGCGACTCTCTCAGCACGGTCCCGGTCGTTGGAGGGGTGGTGCAG AGCGTTGCCAATACCGCTGGCAATGTGGTCGGCACGCTGGGTGATGGTATGTCCAATGGCATCGGCAAACTGGCCAGCAC CCCGAATGGCGTGGGTGTAACCGCCTCGGCGGTCGGCGGAGTGGTGCAGGATGTTGGCAACGGTGTTTCGGATGTCAGTG GCAAACTGGCGACCGCCACCGGCAGTATTCCGGTAGTCGGCGGGGTGGTGACCAAAGTGGCACCGGTACTCGACGGCGTT GGCGAAAAAGTCACGATGCTTGGCGACACGCTCAGCACCGCCACGACCACCGGACCGCTCGGCGGACTCACCACCCAGGT CAGTCAGAAACTGGTGCCGGTGATTGCCATGGTTGAAAGCACCACCGACAAACTCGGGAGCACCACCGGTCTTGGTGCCC CCCTCAACGGCGTTCTCCAGAAAGTCGGCGGTACCGTGGACGGTCTCGGTGACAACGTGACAGCGGCCGGCAAGGGCAAT GCCCTTACCAACACCCTCGGCGGTGCGCTGAGCAACGTCGGCACCACAGTTGGCAAGGCCGGCGGGCTGGTAGCCAACGG CACGGGTGGCAATTCGGGCGGTATCGGTGGCAGTCTCGGCGGCACCGGTCTGCTGCAAACGGTCGGTGGCGCCGTGGCCA ATGTCGGTGCCGGTCTGGGAGCCGGCAACACTACGCTGAGCGCACCCGGCAATGTGCTGGTATCGACAGGCAACACCGTG GCTTCGCTCAACACCGCACTGGGTGGCTCCGGCACCCCCATCACCACACCCACCACGGCACTGGCCAGTGTCGGCAACGC CGTCGGCGCAGGCCTGAGCCCTGTGACCAGTGCAGTGACCAGCCTGACGCAAAATGTCGGTAATACAACCGGGCTTGGCG GGCCTGTAGCCGGTCTCACAGCGCAAGTGGGTGGCGCCGTGAGCAATCTGGGTGGCACTCTCGCCGGCACCACAACCAAT CCGGTAGTCGCTGCAGTCGGTGGTACCGTCGGCACGGTGGGCAGCACGGTAACCGCCGTCGGCGGTCTGCTCAACGGCGG TGCGGGTACACCGGCCACGACCCCTGTAACAACCGTCGTCAGCAACACTGTCAATACCGTCGGCGGAGCGCTCGCAGGCG CCACCAACGGCGGCAGCGGCGCAGGTCTGGGCGGCGTACTCGGTGGTCTCACCGGCGCATTGGGAGGTAACAAACGCTAA
Upstream 100 bases:
>100_bases GCGACTGATATGAGCACAACGGACGAAGGCATTGCCGGCAACAGAATCGGCGGGCCATCGAAGTCAACGAACGTTGTGAC AGGTGCAAGGAATACCCAAC
Downstream 100 bases:
>100_bases ATTGCACCTGGCCGATTCGACGGCCGAACCTACAGCGCCTACGCTTGGTTGAGGGCGGAAGATTCCCACGAGTCTTCCGC TTTTTTCTTAGGAGAACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MKTQEWCKSATALTLILSLSLAGCSSGGGGHHSSSGSSSPDSAAAGSGGTGATGGTGDTAGTGGTGGTGNTGGTGGTGGT GTGGTAGTGGTGGTGGTGGTDPTNPTDPTDPTNPTNPTTPTLVTTTLVQDVGNTVSGVGDGVGQVGDSLSTVPVVGGVVQ SVANTAGNVVGTLGDGMSNGIGKLASTPNGVGVTASAVGGVVQDVGNGVSDVSGKLATATGSIPVVGGVVTKVAPVLDGV GEKVTMLGDTLSTATTTGPLGGLTTQVSQKLVPVIAMVESTTDKLGSTTGLGAPLNGVLQKVGGTVDGLGDNVTAAGKGN ALTNTLGGALSNVGTTVGKAGGLVANGTGGNSGGIGGSLGGTGLLQTVGGAVANVGAGLGAGNTTLSAPGNVLVSTGNTV ASLNTALGGSGTPITTPTTALASVGNAVGAGLSPVTSAVTSLTQNVGNTTGLGGPVAGLTAQVGGAVSNLGGTLAGTTTN PVVAAVGGTVGTVGSTVTAVGGLLNGGAGTPATTPVTTVVSNTVNTVGGALAGATNGGSGAGLGGVLGGLTGALGGNKR
Sequences:
>Translated_559_residues MKTQEWCKSATALTLILSLSLAGCSSGGGGHHSSSGSSSPDSAAAGSGGTGATGGTGDTAGTGGTGGTGNTGGTGGTGGT GTGGTAGTGGTGGTGGTGGTDPTNPTDPTDPTNPTNPTTPTLVTTTLVQDVGNTVSGVGDGVGQVGDSLSTVPVVGGVVQ SVANTAGNVVGTLGDGMSNGIGKLASTPNGVGVTASAVGGVVQDVGNGVSDVSGKLATATGSIPVVGGVVTKVAPVLDGV GEKVTMLGDTLSTATTTGPLGGLTTQVSQKLVPVIAMVESTTDKLGSTTGLGAPLNGVLQKVGGTVDGLGDNVTAAGKGN ALTNTLGGALSNVGTTVGKAGGLVANGTGGNSGGIGGSLGGTGLLQTVGGAVANVGAGLGAGNTTLSAPGNVLVSTGNTV ASLNTALGGSGTPITTPTTALASVGNAVGAGLSPVTSAVTSLTQNVGNTTGLGGPVAGLTAQVGGAVSNLGGTLAGTTTN PVVAAVGGTVGTVGSTVTAVGGLLNGGAGTPATTPVTTVVSNTVNTVGGALAGATNGGSGAGLGGVLGGLTGALGGNKR >Mature_559_residues MKTQEWCKSATALTLILSLSLAGCSSGGGGHHSSSGSSSPDSAAAGSGGTGATGGTGDTAGTGGTGGTGNTGGTGGTGGT GTGGTAGTGGTGGTGGTGGTDPTNPTDPTDPTNPTNPTTPTLVTTTLVQDVGNTVSGVGDGVGQVGDSLSTVPVVGGVVQ SVANTAGNVVGTLGDGMSNGIGKLASTPNGVGVTASAVGGVVQDVGNGVSDVSGKLATATGSIPVVGGVVTKVAPVLDGV GEKVTMLGDTLSTATTTGPLGGLTTQVSQKLVPVIAMVESTTDKLGSTTGLGAPLNGVLQKVGGTVDGLGDNVTAAGKGN ALTNTLGGALSNVGTTVGKAGGLVANGTGGNSGGIGGSLGGTGLLQTVGGAVANVGAGLGAGNTTLSAPGNVLVSTGNTV ASLNTALGGSGTPITTPTTALASVGNAVGAGLSPVTSAVTSLTQNVGNTTGLGGPVAGLTAQVGGAVSNLGGTLAGTTTN PVVAAVGGTVGTVGSTVTAVGGLLNGGAGTPATTPVTTVVSNTVNTVGGALAGATNGGSGAGLGGVLGGLTGALGGNKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50324; Mature: 50324
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTQEWCKSATALTLILSLSLAGCSSGGGGHHSSSGSSSPDSAAAGSGGTGATGGTGDTA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTGGTGGTGNTGGTGGTGGTGTGGTAGTGGTGGTGGTGGTDPTNPTDPTDPTNPTNPTTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TLVTTTLVQDVGNTVSGVGDGVGQVGDSLSTVPVVGGVVQSVANTAGNVVGTLGDGMSNG HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEHHCCCHHHH IGKLASTPNGVGVTASAVGGVVQDVGNGVSDVSGKLATATGSIPVVGGVVTKVAPVLDGV HHHHHCCCCCCCEEHHHHHHHHHHHCCCHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCC GEKVTMLGDTLSTATTTGPLGGLTTQVSQKLVPVIAMVESTTDKLGSTTGLGAPLNGVLQ CCEEEHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH KVGGTVDGLGDNVTAAGKGNALTNTLGGALSNVGTTVGKAGGLVANGTGGNSGGIGGSLG HHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC GTGLLQTVGGAVANVGAGLGAGNTTLSAPGNVLVSTGNTVASLNTALGGSGTPITTPTTA CHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCHHHHHHHCCCCCCCCCCCHHH LASVGNAVGAGLSPVTSAVTSLTQNVGNTTGLGGPVAGLTAQVGGAVSNLGGTLAGTTTN HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PVVAAVGGTVGTVGSTVTAVGGLLNGGAGTPATTPVTTVVSNTVNTVGGALAGATNGGSG CEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC AGLGGVLGGLTGALGGNKR CCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTQEWCKSATALTLILSLSLAGCSSGGGGHHSSSGSSSPDSAAAGSGGTGATGGTGDTA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTGGTGGTGNTGGTGGTGGTGTGGTAGTGGTGGTGGTGGTDPTNPTDPTDPTNPTNPTTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TLVTTTLVQDVGNTVSGVGDGVGQVGDSLSTVPVVGGVVQSVANTAGNVVGTLGDGMSNG HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEHHCCCHHHH IGKLASTPNGVGVTASAVGGVVQDVGNGVSDVSGKLATATGSIPVVGGVVTKVAPVLDGV HHHHHCCCCCCCEEHHHHHHHHHHHCCCHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCC GEKVTMLGDTLSTATTTGPLGGLTTQVSQKLVPVIAMVESTTDKLGSTTGLGAPLNGVLQ CCEEEHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH KVGGTVDGLGDNVTAAGKGNALTNTLGGALSNVGTTVGKAGGLVANGTGGNSGGIGGSLG HHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC GTGLLQTVGGAVANVGAGLGAGNTTLSAPGNVLVSTGNTVASLNTALGGSGTPITTPTTA CHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCHHHHHHHCCCCCCCCCCCHHH LASVGNAVGAGLSPVTSAVTSLTQNVGNTTGLGGPVAGLTAQVGGAVSNLGGTLAGTTTN HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PVVAAVGGTVGTVGSTVTAVGGLLNGGAGTPATTPVTTVVSNTVNTVGGALAGATNGGSG CEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC AGLGGVLGGLTGALGGNKR CCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA