Click here to switch to the map view.

The map label for this gene is 77456872

Identifier: 77456872

GI number: 77456872

Start: 754818

End: 755708

Strand: Reverse

Name: 77456872

Synonym: Pfl01_0644

Alternate gene names: NA

Gene position: 755708-754818 (Counterclockwise)

Preceding gene: 77456873

Following gene: 77456871

Centisome position: 11.74

GC content: 64.09

Gene sequence:

>891_bases
ATGACCATGCCTCTGATGATCAGCGCCCTGTTGATGCTGGGCGCTGCACTGTTGCTGATCAGCGGCCTGCTCGACCGCCG
CCGTCGCTCGCGACAGGTCACGCGGCGGCTGGAAGGTGCGCTGCTGCGCGACAATCGTTTCGGCAACCTGCTGCAAGTAC
TTGGCGGCAGCGCCCTCGGCCAGCGCGCAGTCAAGCTCGACAACGAAACCCAGACCCTGCTCAACCGCCTCGGCTGGCGC
AGCGCCCGCCAGCGTTCGCTGTTCGCCGCCTGCCAGATCGGTACGCCGCTGCTGTTGCTGAGCGTGGCGGTCTTGCTGCA
AGGGGTGCTGTTTCCTCACATCGAGCGTCAATGGATCGCCCCGCTGTTTGCCCTCGGCATCGGCTACCTGTTGCCCAAAC
GCCTGCTGGCGATGGCCGCCGGCCGCCGGCAAAAACAACTGGCCACGGAAATCTCCACCTTCATTCCTTTGCTGCGCATC
CTGTTCGAAGCCGGCATGGCCGTCGAGCAGGCGTTGCGCGTGCTCAGCCATGAAGGCCAGACGTTGCTGCCGGTGCTGAC
CCAGGAATTGCGTCTGGTGCTGGCCCGGGTCGACTCGGGCCTGGAGCTGGGCGAGGAACTGAACAAGGCCACGCGCCTGC
TGGCGGTGGACGAATTCACCGACACCTGCGTGATCCTTCAGCAACTGCTGCAACAGGGCGGGGGCGCGATGAAATCGCTG
CTGGCGCTCAAGCAACTGCTCGATGACCGACGCCTGACCAGGCTGCAGGAATACATCTCGAAAATGTCCGCCAAAATGTC
CGTCGTGATGATGATGTTTCTCTTCCCGGCGCTGTTGATCGTCCTCGCAGGCCCGGGCTTCAGTGCCCTGGCGCGGGCAC
TGGGCTCATAG

Upstream 100 bases:

>100_bases
TCGCCATGTGGAACGACCATTCCGGCCAGATGATGCTCGCCAGCGCCTTCGGCCTGCAGGTGATCGGCAGCCTGCTGCTC
TGGCGGATGTTGCGCAGCCT

Downstream 100 bases:

>100_bases
AAGGAATCGCCATGAAAGCAATGATTGCCAGCTTGACCCTGCTGATGCTCGGCGGCTGCGCCAGCAACGGCCAGACGCCG
TGGAGCGCCCTGAACCCGAA

Product: type II secretion system protein

Products: NA

Alternate protein names: Type II Secretion System Protein F Subunit; Type II Secretion System Protein F Domain; Type II/IV Secretion System Membrane Protein

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTMPLMISALLMLGAALLLISGLLDRRRRSRQVTRRLEGALLRDNRFGNLLQVLGGSALGQRAVKLDNETQTLLNRLGWR
SARQRSLFAACQIGTPLLLLSVAVLLQGVLFPHIERQWIAPLFALGIGYLLPKRLLAMAAGRRQKQLATEISTFIPLLRI
LFEAGMAVEQALRVLSHEGQTLLPVLTQELRLVLARVDSGLELGEELNKATRLLAVDEFTDTCVILQQLLQQGGGAMKSL
LALKQLLDDRRLTRLQEYISKMSAKMSVVMMMFLFPALLIVLAGPGFSALARALGS

Sequences:

>Translated_296_residues
MTMPLMISALLMLGAALLLISGLLDRRRRSRQVTRRLEGALLRDNRFGNLLQVLGGSALGQRAVKLDNETQTLLNRLGWR
SARQRSLFAACQIGTPLLLLSVAVLLQGVLFPHIERQWIAPLFALGIGYLLPKRLLAMAAGRRQKQLATEISTFIPLLRI
LFEAGMAVEQALRVLSHEGQTLLPVLTQELRLVLARVDSGLELGEELNKATRLLAVDEFTDTCVILQQLLQQGGGAMKSL
LALKQLLDDRRLTRLQEYISKMSAKMSVVMMMFLFPALLIVLAGPGFSALARALGS
>Mature_295_residues
TMPLMISALLMLGAALLLISGLLDRRRRSRQVTRRLEGALLRDNRFGNLLQVLGGSALGQRAVKLDNETQTLLNRLGWRS
ARQRSLFAACQIGTPLLLLSVAVLLQGVLFPHIERQWIAPLFALGIGYLLPKRLLAMAAGRRQKQLATEISTFIPLLRIL
FEAGMAVEQALRVLSHEGQTLLPVLTQELRLVLARVDSGLELGEELNKATRLLAVDEFTDTCVILQQLLQQGGGAMKSLL
ALKQLLDDRRLTRLQEYISKMSAKMSVVMMMFLFPALLIVLAGPGFSALARALGS

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32643; Mature: 32512

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPLMISALLMLGAALLLISGLLDRRRRSRQVTRRLEGALLRDNRFGNLLQVLGGSALG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH
QRAVKLDNETQTLLNRLGWRSARQRSLFAACQIGTPLLLLSVAVLLQGVLFPHIERQWIA
HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
PLFALGIGYLLPKRLLAMAAGRRQKQLATEISTFIPLLRILFEAGMAVEQALRVLSHEGQ
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC
TLLPVLTQELRLVLARVDSGLELGEELNKATRLLAVDEFTDTCVILQQLLQQGGGAMKSL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LALKQLLDDRRLTRLQEYISKMSAKMSVVMMMFLFPALLIVLAGPGFSALARALGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
TMPLMISALLMLGAALLLISGLLDRRRRSRQVTRRLEGALLRDNRFGNLLQVLGGSALG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH
QRAVKLDNETQTLLNRLGWRSARQRSLFAACQIGTPLLLLSVAVLLQGVLFPHIERQWIA
HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
PLFALGIGYLLPKRLLAMAAGRRQKQLATEISTFIPLLRILFEAGMAVEQALRVLSHEGQ
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC
TLLPVLTQELRLVLARVDSGLELGEELNKATRLLAVDEFTDTCVILQQLLQQGGGAMKSL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LALKQLLDDRRLTRLQEYISKMSAKMSVVMMMFLFPALLIVLAGPGFSALARALGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA