| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is dipZ [H]
Identifier: 77456849
GI number: 77456849
Start: 729081
End: 730838
Strand: Reverse
Name: dipZ [H]
Synonym: Pfl01_0621
Alternate gene names: 77456849
Gene position: 730838-729081 (Counterclockwise)
Preceding gene: 77456850
Following gene: 77456848
Centisome position: 11.35
GC content: 63.31
Gene sequence:
>1758_bases ATGCGCCGTCTGCTCTGCCTGCTGTTTTTCATCTTCGCCCTGCCGGCCGGCGCCGCCGGTCTGTTCGACAGCAAACCCAG CGCCACACTGGGCTCGGTCAATAACAGTGCCGATTTCCTGCCGGTGCGCGAAGCCTTTCAACTGAGCCTGGTCGAGAGCA CGCCGCAATCGGTCAAACTGCGCTTCGTTGCCACCGAAGGCTATTACCTCTACCGCCATCGCTTCCAGTTCCGTGCCGAG CCTGCCGAGGTGAAACTCGGTGCCGCACAACTGCCCCAAGGCGAACAGAAGCACGACGAGTATTTCGGCGACGTCGAGGT CTACCACGGCATTCTCGATGTAGAACTGCCGCGCAATGATTCCCGGTCGTTCACGCTGGCCGTCACCTATCAGGGCTGTG CCGACAAGGGTTTGTGCTATCCACCGGAAACCGAACGCCTGAGCATCGAGGGCAACGCGGCGGCAAATGACGCGTCCGCT CCGGTGGCGGGTTGGGACTGGCGTGATCTGGCGCTGTTTTTCCTGGCGGGCCTGGGCCTGACCTTCACGCCTTGTGTATT GCCGATGCTGCCGATCCTGTCCGGTGTGGTGTTGCGTGGGCAGGTCGGCGGTTTGCGTGGCTTCAATCTGTCGCTGGCTT ATGTGCTGCCGATGGCCGCGTGTTTCGCGCTGCTCGGCGCATTGATGGGGCTGTTCGGCGCGCAACTGAATCTGCAGGCA CGGCTGCAATCGGCTTGGGTACTGGTGCCGTTCGCGATGTTCTTTGCGGTGTTCGCACTGGCGATGTTCGGCGTGTTCGA GCTGAAACTGCCGCACTTCATCAGCAGCCGACTCGACCGGATTGCCGGGCGCACCGAAGGCGGCTCGTTGTGGGGCGCGG CGGTGTTGGGCGTGGTGTCGAGTCTGCTGGTCTCGCCGTGCGTTTCCGCACCGCTGGCCGGCGCACTGCTTTATATCAGC GCCAGCGGCGATGCGCTGGGCGGTGGCCTGAAGCTGTTCATGCTCGGCCTGGGCATGGGCGCGCCGCTGTTGCTGGTGGC CACCGGCGGCGCGGCGTGGCTGCCGAAAAGCGGGCCGTGGATGATGTACGTGAAGAACGGCATCGGCGTATTGCTGCTCG GGCTGGCGATCGGCCTGCTCAGCCGGGTACTGCCGGGGCAGATCACGTTGCTGCTGATCGGCTTGCTGGCTGGTGGCGTT GGCCTGTTCCTCGGTGCTCTGGAATTTGTCTACAAACCGCCGCGCAAACGCCTCGGCCAGCTGCTCGGCCTGTTCCTGCT GTTTTATGCGCTGGCCTGCTGGTACGGCGCGTTCAGCGGGCAGACCGACCCGTTGAATCCGATAGCCCCGGCACGCCTTG CCGACAGCGGTTCGACTGCGCAAAACAGCGGTTCGTGGCAGACCGTCAGCACCCCGGCGGAACTGGATCGGGTGCTGCTC GAAGCGAAAACCGCCGGCACCCCGCTGCTGCTCGACTGGTACGCCGACTGGTGCATCAGCTGCAAAGTCATCGAACACGA AGTACTCAATGACGCCACAGTCTTGGATCGGCTCAAGGGTTATCGGCTGATCCGCTTCGATATCACCGCCAGCAATGCCG AACAGCGCACCCTGCTCGACCGCTACAGCCTGTTCGGCCCACCGGCGCTGATGTTCTTCGGCAAGGACGGGGTGGAACGT CGCGATGTGCGAGTGATCGGCGAGATCAACGCCGGCGACTTCGCCGAACGTGTCGCCAAAGCGAATGACCGGATTTAA
Upstream 100 bases:
>100_bases GGCGGTCAGCTGCACACTGCCGTGCAGGCGTTCCGCGTGTGACACACAGCGCAGGGCCAAGTCCGCTATCATTCCCGCAC CTTTGATTCGCGAGATTGTC
Downstream 100 bases:
>100_bases TCAGTCAGTCACATATTTTGCGCAAACATCGGACATCGTGCTGGCTATTGCAGAGAACTGGACAGTCACAAAGTCTTTGC GGCATAGTCGCCGGGTTCTG
Product: thiol:disulfide interchange protein
Products: NA
Alternate protein names: Protein-disulfide reductase 1; Disulfide reductase 1 [H]
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MRRLLCLLFFIFALPAGAAGLFDSKPSATLGSVNNSADFLPVREAFQLSLVESTPQSVKLRFVATEGYYLYRHRFQFRAE PAEVKLGAAQLPQGEQKHDEYFGDVEVYHGILDVELPRNDSRSFTLAVTYQGCADKGLCYPPETERLSIEGNAAANDASA PVAGWDWRDLALFFLAGLGLTFTPCVLPMLPILSGVVLRGQVGGLRGFNLSLAYVLPMAACFALLGALMGLFGAQLNLQA RLQSAWVLVPFAMFFAVFALAMFGVFELKLPHFISSRLDRIAGRTEGGSLWGAAVLGVVSSLLVSPCVSAPLAGALLYIS ASGDALGGGLKLFMLGLGMGAPLLLVATGGAAWLPKSGPWMMYVKNGIGVLLLGLAIGLLSRVLPGQITLLLIGLLAGGV GLFLGALEFVYKPPRKRLGQLLGLFLLFYALACWYGAFSGQTDPLNPIAPARLADSGSTAQNSGSWQTVSTPAELDRVLL EAKTAGTPLLLDWYADWCISCKVIEHEVLNDATVLDRLKGYRLIRFDITASNAEQRTLLDRYSLFGPPALMFFGKDGVER RDVRVIGEINAGDFAERVAKANDRI
Sequences:
>Translated_585_residues MRRLLCLLFFIFALPAGAAGLFDSKPSATLGSVNNSADFLPVREAFQLSLVESTPQSVKLRFVATEGYYLYRHRFQFRAE PAEVKLGAAQLPQGEQKHDEYFGDVEVYHGILDVELPRNDSRSFTLAVTYQGCADKGLCYPPETERLSIEGNAAANDASA PVAGWDWRDLALFFLAGLGLTFTPCVLPMLPILSGVVLRGQVGGLRGFNLSLAYVLPMAACFALLGALMGLFGAQLNLQA RLQSAWVLVPFAMFFAVFALAMFGVFELKLPHFISSRLDRIAGRTEGGSLWGAAVLGVVSSLLVSPCVSAPLAGALLYIS ASGDALGGGLKLFMLGLGMGAPLLLVATGGAAWLPKSGPWMMYVKNGIGVLLLGLAIGLLSRVLPGQITLLLIGLLAGGV GLFLGALEFVYKPPRKRLGQLLGLFLLFYALACWYGAFSGQTDPLNPIAPARLADSGSTAQNSGSWQTVSTPAELDRVLL EAKTAGTPLLLDWYADWCISCKVIEHEVLNDATVLDRLKGYRLIRFDITASNAEQRTLLDRYSLFGPPALMFFGKDGVER RDVRVIGEINAGDFAERVAKANDRI >Mature_585_residues MRRLLCLLFFIFALPAGAAGLFDSKPSATLGSVNNSADFLPVREAFQLSLVESTPQSVKLRFVATEGYYLYRHRFQFRAE PAEVKLGAAQLPQGEQKHDEYFGDVEVYHGILDVELPRNDSRSFTLAVTYQGCADKGLCYPPETERLSIEGNAAANDASA PVAGWDWRDLALFFLAGLGLTFTPCVLPMLPILSGVVLRGQVGGLRGFNLSLAYVLPMAACFALLGALMGLFGAQLNLQA RLQSAWVLVPFAMFFAVFALAMFGVFELKLPHFISSRLDRIAGRTEGGSLWGAAVLGVVSSLLVSPCVSAPLAGALLYIS ASGDALGGGLKLFMLGLGMGAPLLLVATGGAAWLPKSGPWMMYVKNGIGVLLLGLAIGLLSRVLPGQITLLLIGLLAGGV GLFLGALEFVYKPPRKRLGQLLGLFLLFYALACWYGAFSGQTDPLNPIAPARLADSGSTAQNSGSWQTVSTPAELDRVLL EAKTAGTPLLLDWYADWCISCKVIEHEVLNDATVLDRLKGYRLIRFDITASNAEQRTLLDRYSLFGPPALMFFGKDGVER RDVRVIGEINAGDFAERVAKANDRI
Specific function: Involved in the formation of correct disulfide bonds in some periplasmic proteins and in the assembly of the periplasmic C-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790578, Length=578, Percent_Identity=36.5051903114187, Blast_Score=313, Evalue=2e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003834 - InterPro: IPR022910 - InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02683 DsbD [H]
EC number: =1.8.1.8 [H]
Molecular weight: Translated: 62940; Mature: 62940
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLCLLFFIFALPAGAAGLFDSKPSATLGSVNNSADFLPVREAFQLSLVESTPQSVKL CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE RFVATEGYYLYRHRFQFRAEPAEVKLGAAQLPQGEQKHDEYFGDVEVYHGILDVELPRND EEEEECCEEEEEEEEHCCCCCCCEEECHHCCCCCCHHHHHHCCCHHHHCCEEEEEECCCC SRSFTLAVTYQGCADKGLCYPPETERLSIEGNAAANDASAPVAGWDWRDLALFFLAGLGL CCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC TFTPCVLPMLPILSGVVLRGQVGGLRGFNLSLAYVLPMAACFALLGALMGLFGAQLNLQA HHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RLQSAWVLVPFAMFFAVFALAMFGVFELKLPHFISSRLDRIAGRTEGGSLWGAAVLGVVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH SLLVSPCVSAPLAGALLYISASGDALGGGLKLFMLGLGMGAPLLLVATGGAAWLPKSGPW HHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCEECCCCCCE MMYVKNGIGVLLLGLAIGLLSRVLPGQITLLLIGLLAGGVGLFLGALEFVYKPPRKRLGQ EEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LLGLFLLFYALACWYGAFSGQTDPLNPIAPARLADSGSTAQNSGSWQTVSTPAELDRVLL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHH EAKTAGTPLLLDWYADWCISCKVIEHEVLNDATVLDRLKGYRLIRFDITASNAEQRTLLD HHHCCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEEECCCCHHHHHHH RYSLFGPPALMFFGKDGVERRDVRVIGEINAGDFAERVAKANDRI HHHHCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCC >Mature Secondary Structure MRRLLCLLFFIFALPAGAAGLFDSKPSATLGSVNNSADFLPVREAFQLSLVESTPQSVKL CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE RFVATEGYYLYRHRFQFRAEPAEVKLGAAQLPQGEQKHDEYFGDVEVYHGILDVELPRND EEEEECCEEEEEEEEHCCCCCCCEEECHHCCCCCCHHHHHHCCCHHHHCCEEEEEECCCC SRSFTLAVTYQGCADKGLCYPPETERLSIEGNAAANDASAPVAGWDWRDLALFFLAGLGL CCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC TFTPCVLPMLPILSGVVLRGQVGGLRGFNLSLAYVLPMAACFALLGALMGLFGAQLNLQA HHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RLQSAWVLVPFAMFFAVFALAMFGVFELKLPHFISSRLDRIAGRTEGGSLWGAAVLGVVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH SLLVSPCVSAPLAGALLYISASGDALGGGLKLFMLGLGMGAPLLLVATGGAAWLPKSGPW HHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCEECCCCCCE MMYVKNGIGVLLLGLAIGLLSRVLPGQITLLLIGLLAGGVGLFLGALEFVYKPPRKRLGQ EEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LLGLFLLFYALACWYGAFSGQTDPLNPIAPARLADSGSTAQNSGSWQTVSTPAELDRVLL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHH EAKTAGTPLLLDWYADWCISCKVIEHEVLNDATVLDRLKGYRLIRFDITASNAEQRTLLD HHHCCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEEECCCCHHHHHHH RYSLFGPPALMFFGKDGVERRDVRVIGEINAGDFAERVAKANDRI HHHHCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353916; 10984043 [H]