| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is accC [H]
Identifier: 77456846
GI number: 77456846
Start: 726625
End: 727983
Strand: Reverse
Name: accC [H]
Synonym: Pfl01_0618
Alternate gene names: 77456846
Gene position: 727983-726625 (Counterclockwise)
Preceding gene: 77456847
Following gene: 77456845
Centisome position: 11.31
GC content: 60.85
Gene sequence:
>1359_bases ATGACTGCGAAGTTGGAAAAAGTTCTGATCGCTAACCGCGGTGAGATCGCCCTGCGGATTCTGCGTGCCTGCAAAGAGAT GGGCATCAAGACCGTCGCCGTTTACTCCAAGGCCGACAAAGAGCTGATGCACCTGGGTCTGGCAGACGAATCCGTCTGCA TCGGCCCGGCTTCTGCCGCGCACTCCTACCTGCACATCCCGGCAATCATTGCGGCCGCTGAAGTGACTGGCGCTACCGCC ATTCACCCAGGCTACGGTTTCCTCGCGGAAAACGCCGACTTTGCCGAGCAGGTCGAGAACTCCGGCTTCGCCTTCATCGG CCCGAAAGCCGAAACCATTCGCCTGATGGGCGACAAGGTATCGGCCAAGCACGCGATGATCGAAGCGGGCGTGCCAACCG TTCCAGGTTCCGACGGCCCGCTGCCGGAAGACGAGGAAACGGCGCTGCGCATCGGTCGTGAAGTCGGCTATCCGGTGATC ATCAAGGCCGCCGGCGGCGGTGGTGGTCGCGGCATGCGTGTGGTGCACAAGGAAGAAGACCTGATCGCCTCGGCAAAGCT GACCCGCTCCGAAGCTGGCGCGGCGTTCGGCAACCCGATGGTCTATCTGGAAAAATTCCTGACCAATCCGCGTCACGTCG AAGTGCAGGTTCTGTCCGACGGCCAGGGCAACGCCATCCATCTGGGCGACCGCGATTGCTCGCTGCAACGCCGTCACCAG AAAGTTCTCGAAGAAGCACCGGCACCGGGCATCGATGAGAACGCGCGCAAGGAAGTCCTGGCCCGCTGCGTCAAGGCGTG CATCGACATCGGCTACCGTGGCGCCGGCACCTTCGAGTTCCTGTACGAGAACGGTCGTTTCTACTTCATCGAAATGAACA CCCGTGTTCAGGTGGAGCACCCGGTTTCGGAAATGGTCACCGGTATCGACATCGTCAAGGAGATGCTCAGCATCGCCGCT GGCAACAAGCTGTCGTATACCCAGGATGATGTGGTGATCCGCGGTCACTCGCTGGAATGCCGGATCAACGCCGAAGACCC GAAAACCTTCATGCCGAGCCCGGGCACGGTCAAGCATTTCCACGCACCAGGCGGCAACGGCGTTCGCGTCGATTCGCACC TGTACAGCGGTTATGCCGTTCCGCCGAACTACGACTCGCTGATCGGCAAGCTGATCACTTACGGCGCGACCCGCGACGAA GCCATGGCCCGCATGCGCAATGCCCTGGACGAAATCGTGGTCGACGGGATCAAGACCAACATCCCGCTGCACCGTGATCT GACCCGCGACGAAGGCTTCTGCAAAGGGGGCGTGAACATTCACTACCTCGAGCACAAGCTGGCTGGCGAGAAGCACTAA
Upstream 100 bases:
>100_bases AAACCAGCGGTGTGATCGAGTCCATCCTCGTCGAAGACGGCCAGCCGGTTGAGTACGACCAACCGCTGTTCACCATCGTT TGAACTGCGGAGAGCCTTTG
Downstream 100 bases:
>100_bases GCTTCAGCCCGCACCTGACAAGGCCGCCTTCGGGCGGCTTTGTTGTTTCCGAAGGTTTCATCTGCTCACACATTCCCCGC TCCCACAAAACCGTCGCGCT
Product: acetyl-CoA carboxylase biotin carboxylase subunit
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MTAKLEKVLIANRGEIALRILRACKEMGIKTVAVYSKADKELMHLGLADESVCIGPASAAHSYLHIPAIIAAAEVTGATA IHPGYGFLAENADFAEQVENSGFAFIGPKAETIRLMGDKVSAKHAMIEAGVPTVPGSDGPLPEDEETALRIGREVGYPVI IKAAGGGGGRGMRVVHKEEDLIASAKLTRSEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDGQGNAIHLGDRDCSLQRRHQ KVLEEAPAPGIDENARKEVLARCVKACIDIGYRGAGTFEFLYENGRFYFIEMNTRVQVEHPVSEMVTGIDIVKEMLSIAA GNKLSYTQDDVVIRGHSLECRINAEDPKTFMPSPGTVKHFHAPGGNGVRVDSHLYSGYAVPPNYDSLIGKLITYGATRDE AMARMRNALDEIVVDGIKTNIPLHRDLTRDEGFCKGGVNIHYLEHKLAGEKH
Sequences:
>Translated_452_residues MTAKLEKVLIANRGEIALRILRACKEMGIKTVAVYSKADKELMHLGLADESVCIGPASAAHSYLHIPAIIAAAEVTGATA IHPGYGFLAENADFAEQVENSGFAFIGPKAETIRLMGDKVSAKHAMIEAGVPTVPGSDGPLPEDEETALRIGREVGYPVI IKAAGGGGGRGMRVVHKEEDLIASAKLTRSEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDGQGNAIHLGDRDCSLQRRHQ KVLEEAPAPGIDENARKEVLARCVKACIDIGYRGAGTFEFLYENGRFYFIEMNTRVQVEHPVSEMVTGIDIVKEMLSIAA GNKLSYTQDDVVIRGHSLECRINAEDPKTFMPSPGTVKHFHAPGGNGVRVDSHLYSGYAVPPNYDSLIGKLITYGATRDE AMARMRNALDEIVVDGIKTNIPLHRDLTRDEGFCKGGVNIHYLEHKLAGEKH >Mature_451_residues TAKLEKVLIANRGEIALRILRACKEMGIKTVAVYSKADKELMHLGLADESVCIGPASAAHSYLHIPAIIAAAEVTGATAI HPGYGFLAENADFAEQVENSGFAFIGPKAETIRLMGDKVSAKHAMIEAGVPTVPGSDGPLPEDEETALRIGREVGYPVII KAAGGGGGRGMRVVHKEEDLIASAKLTRSEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDGQGNAIHLGDRDCSLQRRHQK VLEEAPAPGIDENARKEVLARCVKACIDIGYRGAGTFEFLYENGRFYFIEMNTRVQVEHPVSEMVTGIDIVKEMLSIAAG NKLSYTQDDVVIRGHSLECRINAEDPKTFMPSPGTVKHFHAPGGNGVRVDSHLYSGYAVPPNYDSLIGKLITYGATRDEA MARMRNALDEIVVDGIKTNIPLHRDLTRDEGFCKGGVNIHYLEHKLAGEKH
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI189095269, Length=443, Percent_Identity=47.1783295711061, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI65506442, Length=443, Percent_Identity=47.1783295711061, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI295821183, Length=443, Percent_Identity=47.1783295711061, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI116805327, Length=442, Percent_Identity=45.0226244343891, Blast_Score=395, Evalue=1e-110, Organism=Homo sapiens, GI106049528, Length=447, Percent_Identity=45.413870246085, Blast_Score=379, Evalue=1e-105, Organism=Homo sapiens, GI106049295, Length=447, Percent_Identity=45.413870246085, Blast_Score=379, Evalue=1e-105, Organism=Homo sapiens, GI106049292, Length=447, Percent_Identity=45.413870246085, Blast_Score=379, Evalue=1e-105, Organism=Homo sapiens, GI38679960, Length=511, Percent_Identity=31.8982387475538, Blast_Score=227, Evalue=1e-59, Organism=Homo sapiens, GI38679977, Length=511, Percent_Identity=31.8982387475538, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI38679967, Length=511, Percent_Identity=31.8982387475538, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI38679974, Length=511, Percent_Identity=31.8982387475538, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI38679971, Length=511, Percent_Identity=31.8982387475538, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI134142062, Length=515, Percent_Identity=30.2912621359223, Blast_Score=219, Evalue=4e-57, Organism=Escherichia coli, GI1789654, Length=443, Percent_Identity=69.7516930022573, Blast_Score=632, Evalue=0.0, Organism=Escherichia coli, GI1786216, Length=192, Percent_Identity=25, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17567343, Length=444, Percent_Identity=46.3963963963964, Blast_Score=404, Evalue=1e-113, Organism=Caenorhabditis elegans, GI71987519, Length=444, Percent_Identity=44.8198198198198, Blast_Score=367, Evalue=1e-102, Organism=Caenorhabditis elegans, GI17562816, Length=450, Percent_Identity=43.7777777777778, Blast_Score=359, Evalue=2e-99, Organism=Caenorhabditis elegans, GI71997168, Length=509, Percent_Identity=29.0766208251473, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI71997163, Length=509, Percent_Identity=29.0766208251473, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI133931226, Length=496, Percent_Identity=27.6209677419355, Blast_Score=189, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6319695, Length=447, Percent_Identity=46.0850111856823, Blast_Score=361, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6319685, Length=442, Percent_Identity=43.6651583710407, Blast_Score=361, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6321376, Length=447, Percent_Identity=46.0850111856823, Blast_Score=352, Evalue=1e-97, Organism=Saccharomyces cerevisiae, GI6324343, Length=526, Percent_Identity=30.4182509505703, Blast_Score=217, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6323863, Length=461, Percent_Identity=31.4533622559653, Blast_Score=209, Evalue=5e-55, Organism=Drosophila melanogaster, GI281363050, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652224, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652222, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652220, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652218, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652212, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652210, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652214, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-108, Organism=Drosophila melanogaster, GI19921944, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652216, Length=447, Percent_Identity=47.6510067114094, Blast_Score=390, Evalue=1e-108, Organism=Drosophila melanogaster, GI24651757, Length=447, Percent_Identity=42.7293064876958, Blast_Score=382, Evalue=1e-106, Organism=Drosophila melanogaster, GI24651759, Length=409, Percent_Identity=42.2982885085575, Blast_Score=340, Evalue=1e-93, Organism=Drosophila melanogaster, GI24586458, Length=511, Percent_Identity=28.9628180039139, Blast_Score=204, Evalue=9e-53, Organism=Drosophila melanogaster, GI161076409, Length=511, Percent_Identity=28.9628180039139, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI161076407, Length=511, Percent_Identity=28.9628180039139, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24586460, Length=511, Percent_Identity=28.9628180039139, Blast_Score=204, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 48973; Mature: 48841
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKLEKVLIANRGEIALRILRACKEMGIKTVAVYSKADKELMHLGLADESVCIGPASAA CCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCEEECCHHHH HSYLHIPAIIAAAEVTGATAIHPGYGFLAENADFAEQVENSGFAFIGPKAETIRLMGDKV CCEEEHHHHHHHHHHCCCEEECCCCCEEECCCHHHHHHHCCCEEEECCCCEEEEEECCCH SAKHAMIEAGVPTVPGSDGPLPEDEETALRIGREVGYPVIIKAAGGGGGRGMRVVHKEED HHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCH LIASAKLTRSEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDGQGNAIHLGDRDCSLQRRHQ HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHH KVLEEAPAPGIDENARKEVLARCVKACIDIGYRGAGTFEFLYENGRFYFIEMNTRVQVEH HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCEEEECC PVSEMVTGIDIVKEMLSIAAGNKLSYTQDDVVIRGHSLECRINAEDPKTFMPSPGTVKHF CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEE HAPGGNGVRVDSHLYSGYAVPPNYDSLIGKLITYGATRDEAMARMRNALDEIVVDGIKTN ECCCCCCEEECCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCC IPLHRDLTRDEGFCKGGVNIHYLEHKLAGEKH CCCCCCCCCCCCCEECCCEEEEEEHHHCCCCC >Mature Secondary Structure TAKLEKVLIANRGEIALRILRACKEMGIKTVAVYSKADKELMHLGLADESVCIGPASAA CCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCEEECCHHHH HSYLHIPAIIAAAEVTGATAIHPGYGFLAENADFAEQVENSGFAFIGPKAETIRLMGDKV CCEEEHHHHHHHHHHCCCEEECCCCCEEECCCHHHHHHHCCCEEEECCCCEEEEEECCCH SAKHAMIEAGVPTVPGSDGPLPEDEETALRIGREVGYPVIIKAAGGGGGRGMRVVHKEED HHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCH LIASAKLTRSEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDGQGNAIHLGDRDCSLQRRHQ HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHH KVLEEAPAPGIDENARKEVLARCVKACIDIGYRGAGTFEFLYENGRFYFIEMNTRVQVEH HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCEEEECC PVSEMVTGIDIVKEMLSIAAGNKLSYTQDDVVIRGHSLECRINAEDPKTFMPSPGTVKHF CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEE HAPGGNGVRVDSHLYSGYAVPPNYDSLIGKLITYGATRDEAMARMRNALDEIVVDGIKTN ECCCCCCEEECCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCC IPLHRDLTRDEGFCKGGVNIHYLEHKLAGEKH CCCCCCCCCCCCCEECCCEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7693652; 10984043 [H]