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The map label for this gene is ychE [C]

Identifier: 77456838

GI number: 77456838

Start: 716093

End: 716689

Strand: Reverse

Name: ychE [C]

Synonym: Pfl01_0610

Alternate gene names: 77456838

Gene position: 716689-716093 (Counterclockwise)

Preceding gene: 77456839

Following gene: 77456831

Centisome position: 11.13

GC content: 59.46

Gene sequence:

>597_bases
ATGCTCCACGTGTTATTCAGTGTTTACCTGAAGATGCTGGTGCTCTACAGCCCGTTCTTCGTGTTGTCCTGCTTCATCAG
CCTGACCCGTGGTTACTCGCGCAAGGAACAACGCCGCCTGGCCTGGAAAGTGGCTGTCGCCACCCTGGTCTCGAGCGTAT
TGCTGTACCTGTTCGGGCGGGTAATCTTCGATGTGTTCGGCATCACCGTGGATGCCTTCCGCATCGGTGCCGGCAGCGTA
CTGTTCATTTCGGCGCTGGGCATGGCGCAGGGCAAGTCCGCCGTGCAGACCGACAACGTGCAGCAGGACGTGACGATTGT
CCCGCTGACCATTCCGCTGACCGTCGGCCCCGGCACCATCGGTGCGCTATTGGTGATGGGCGTCAGCCAGCCACACTGGG
ACGACAAGCTCTTTGCGATCATGAGCATCGCCCTCGCCAGCTTCACGGTGGGCGTGGTGCTGTATCTGTCCAACCGCATC
GAACGGATTCTTGGCGATCAGGGTCTGCAGATCGTCAGCCGCCTGATGGGACTGTTTGTCTGCGCCCTCGCTGCGCAAAT
CATCTTTACCGGTGTGAAAGGTTATCTGGTGCCGTGA

Upstream 100 bases:

>100_bases
GTGATCAGCAGAACCGAGCGACGACGCAACCGTCGTGAGCCGACAGACACGATAGCGCCTGTTAGACTCCCCCGACTTTC
CCCGCCAGCGAGCCCGCGCC

Downstream 100 bases:

>100_bases
AGCAGAAATACACAAGGCCGCCGATGCAGACATCAGCGGCCTTTTTTGGTGGCCATCGAATCAGCGGGTGAACGATTCAC
TCGTTGCGATCAACGCCTTC

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGYSRKEQRRLAWKVAVATLVSSVLLYLFGRVIFDVFGITVDAFRIGAGSV
LFISALGMAQGKSAVQTDNVQQDVTIVPLTIPLTVGPGTIGALLVMGVSQPHWDDKLFAIMSIALASFTVGVVLYLSNRI
ERILGDQGLQIVSRLMGLFVCALAAQIIFTGVKGYLVP

Sequences:

>Translated_198_residues
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGYSRKEQRRLAWKVAVATLVSSVLLYLFGRVIFDVFGITVDAFRIGAGSV
LFISALGMAQGKSAVQTDNVQQDVTIVPLTIPLTVGPGTIGALLVMGVSQPHWDDKLFAIMSIALASFTVGVVLYLSNRI
ERILGDQGLQIVSRLMGLFVCALAAQIIFTGVKGYLVP
>Mature_198_residues
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGYSRKEQRRLAWKVAVATLVSSVLLYLFGRVIFDVFGITVDAFRIGAGSV
LFISALGMAQGKSAVQTDNVQQDVTIVPLTIPLTVGPGTIGALLVMGVSQPHWDDKLFAIMSIALASFTVGVVLYLSNRI
ERILGDQGLQIVSRLMGLFVCALAAQIIFTGVKGYLVP

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=202, Percent_Identity=29.7029702970297, Blast_Score=85, Evalue=2e-18,
Organism=Escherichia coli, GI1787809, Length=196, Percent_Identity=27.0408163265306, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789842, Length=199, Percent_Identity=25.1256281407035, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21550; Mature: 21550

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGYSRKEQRRLAWKVAVATLVSSVLLYLFGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFDVFGITVDAFRIGAGSVLFISALGMAQGKSAVQTDNVQQDVTIVPLTIPLTVGPGTI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEEEEEEECCHHH
GALLVMGVSQPHWDDKLFAIMSIALASFTVGVVLYLSNRIERILGDQGLQIVSRLMGLFV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
CALAAQIIFTGVKGYLVP
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGYSRKEQRRLAWKVAVATLVSSVLLYLFGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFDVFGITVDAFRIGAGSVLFISALGMAQGKSAVQTDNVQQDVTIVPLTIPLTVGPGTI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEEEEEEECCHHH
GALLVMGVSQPHWDDKLFAIMSIALASFTVGVVLYLSNRIERILGDQGLQIVSRLMGLFV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
CALAAQIIFTGVKGYLVP
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]