Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77456697
Identifier: 77456697
GI number: 77456697
Start: 543464
End: 544198
Strand: Direct
Name: 77456697
Synonym: Pfl01_0469
Alternate gene names: NA
Gene position: 543464-544198 (Clockwise)
Preceding gene: 77456696
Following gene: 77456698
Centisome position: 8.44
GC content: 60.95
Gene sequence:
>735_bases ATGGCGGGTTGGAATCTGGAGCCTGAATACAGCGATCTTGCACAACACTTCGGTAGCCTCGAAGCGGTATTCGCCCTTCA GGGCGAGCGCCTGACCCGCGATCCTTTGTCCGAAGTCATTCGCGTGCAGCTCAATGGCGTCAATTATTACGTCAAGCGCT ACGTCGGCGCCGGCAAAGGCTTGCGGCGTTATCTGGGCAAGCCCCGGGTGAAGATGGAATGGCAGAACCTCAAGCGCTTC GCCAAGTGGGGCATTCCCACCGCCGAAGTGGTGGCGTGGGGCCTGGAGCGCAACGGCATGGCCTACGATCGCGGGGCGAT GATCACCCGTGAGCTGCCGCGCACCGAAGACCTGTCGGCACTGGCCGAACGCAACGATCCCAAGCTCAAGGATCGCGCCT GGGTCGACGGCGTCAGCCGGCAGTTGGCCGGTTACACCCGGGTCATGCACGACCACCGCTTTACCCATAACGATCTGAAG TGGCGCAACCTGCTGATCGACGATCAGGCGCAGCTGTTTCTGATCGACTGCCCGAACGGCGATTTCTGGCGTGGCTTCTG GCTCAAGTACCGGATCACCAAGGATCTGGCCTGCCTCGACAAGGTGGCCAAGTATCACCTGTCGAACACCCAGCGCCTGC GCTTCTACCTGCAATACCGCCAGCGTGACCGGCTGAATGCCGCCGACAAGCAACGGATTCGCCACGTGGTGAGATTTTTC GAGGGACGCGAATGA
Upstream 100 bases:
>100_bases TGCGCCGGATCCTGGCCGAAGAAGCGCCGTTGCTGAGCTGGCTTGAAGGCAAGGCCAACAAGCTCTACGCGCGCAAGCAG CGTTACGGGGATGCGCTCTG
Downstream 100 bases:
>100_bases CTGATTTTCTGTCCGCTGAAGACCGTGCGCTGCTGGAGCGCCACGGTCTCGGCACGTTCGATGCGCTGTGGTCCAAGCAG CTCGACGCCGTGGATGAGCC
Product: lipopolysaccharide core biosynthesis protein
Products: NA
Alternate protein names: Lipopolysaccharide Kinase; Serine/Threonine Protein Kinase; Mn2+-Dependent Serine/Threonine Protein Kinase
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MAGWNLEPEYSDLAQHFGSLEAVFALQGERLTRDPLSEVIRVQLNGVNYYVKRYVGAGKGLRRYLGKPRVKMEWQNLKRF AKWGIPTAEVVAWGLERNGMAYDRGAMITRELPRTEDLSALAERNDPKLKDRAWVDGVSRQLAGYTRVMHDHRFTHNDLK WRNLLIDDQAQLFLIDCPNGDFWRGFWLKYRITKDLACLDKVAKYHLSNTQRLRFYLQYRQRDRLNAADKQRIRHVVRFF EGRE
Sequences:
>Translated_244_residues MAGWNLEPEYSDLAQHFGSLEAVFALQGERLTRDPLSEVIRVQLNGVNYYVKRYVGAGKGLRRYLGKPRVKMEWQNLKRF AKWGIPTAEVVAWGLERNGMAYDRGAMITRELPRTEDLSALAERNDPKLKDRAWVDGVSRQLAGYTRVMHDHRFTHNDLK WRNLLIDDQAQLFLIDCPNGDFWRGFWLKYRITKDLACLDKVAKYHLSNTQRLRFYLQYRQRDRLNAADKQRIRHVVRFF EGRE >Mature_243_residues AGWNLEPEYSDLAQHFGSLEAVFALQGERLTRDPLSEVIRVQLNGVNYYVKRYVGAGKGLRRYLGKPRVKMEWQNLKRFA KWGIPTAEVVAWGLERNGMAYDRGAMITRELPRTEDLSALAERNDPKLKDRAWVDGVSRQLAGYTRVMHDHRFTHNDLKW RNLLIDDQAQLFLIDCPNGDFWRGFWLKYRITKDLACLDKVAKYHLSNTQRLRFYLQYRQRDRLNAADKQRIRHVVRFFE GRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28862; Mature: 28731
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: PS00108 PROTEIN_KINASE_ST
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGWNLEPEYSDLAQHFGSLEAVFALQGERLTRDPLSEVIRVQLNGVNYYVKRYVGAGKG CCCCCCCCCHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHH LRRYLGKPRVKMEWQNLKRFAKWGIPTAEVVAWGLERNGMAYDRGAMITRELPRTEDLSA HHHHHCCCCEEECHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCCHHHHCCCCCHHHHH LAERNDPKLKDRAWVDGVSRQLAGYTRVMHDHRFTHNDLKWRNLLIDDQAQLFLIDCPNG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCEEEEECCCC DFWRGFWLKYRITKDLACLDKVAKYHLSNTQRLRFYLQYRQRDRLNAADKQRIRHVVRFF CCEEHEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EGRE CCCC >Mature Secondary Structure AGWNLEPEYSDLAQHFGSLEAVFALQGERLTRDPLSEVIRVQLNGVNYYVKRYVGAGKG CCCCCCCCHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHH LRRYLGKPRVKMEWQNLKRFAKWGIPTAEVVAWGLERNGMAYDRGAMITRELPRTEDLSA HHHHHCCCCEEECHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCCHHHHCCCCCHHHHH LAERNDPKLKDRAWVDGVSRQLAGYTRVMHDHRFTHNDLKWRNLLIDDQAQLFLIDCPNG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCEEEEECCCC DFWRGFWLKYRITKDLACLDKVAKYHLSNTQRLRFYLQYRQRDRLNAADKQRIRHVVRFF CCEEHEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EGRE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA