Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is glnP [H]
Identifier: 77456604
GI number: 77456604
Start: 431365
End: 432324
Strand: Direct
Name: glnP [H]
Synonym: Pfl01_0376
Alternate gene names: 77456604
Gene position: 431365-432324 (Clockwise)
Preceding gene: 77456603
Following gene: 77456605
Centisome position: 6.7
GC content: 63.44
Gene sequence:
>960_bases ATGAAACAGAAAAAAGCCCAATGGCCCTGGCACGTCCTGACCGTGCTGGTGCTGGTCGGCCTGGCCGGCGCGCTGTATTA CGCCACGTCGCTGATGTCCTACGAATGGCGCTGGAACCGCGTGCCGCAGTACTTCGCCTATCAGGCCGAGGAAACCCAGC GCGCGACCGACATTTCCACCGTCAGCGAACTGGTGCGCAAAGGTGGCAGCGCGCAGGTCACCCTGCGCAACGATGCCGGT GACGAGCAGCACCTGACCGTCGACGAAAACAGCCTGCAATTCGCTCAGGGCGACGATGTGGCCGAAGGCGACGTCGTGGG CGTGACCCGGCATTGGGCGGCGGGCCCGCTGTTGTGGGGCCTGTGGACCACGCTTTGGCTGTCGGTGGTGTCCGGCGTGC TGGGCTTGCTCATCGGTCTGGCCACCGGGCTGTGCCGGCTGTCGAGCAACCCGACCCTGCGCGACCTGTCGACGATCTAT GTCGAACTGGTGCGCGGCACGCCGCTGCTGGTGCAGATCTTCATTTTCTATTTCTTCATCGGCACGGTGATGAACCTGTC CCGGGAGTTCGCCGGGATCGCCGCGCTGTCGCTGTTCACCGGTGCCTACGTGGCGGAAATCATCCGTTCCGGTGTGCAGT CGATTGCCCGTGGCCAGAACGAAGCGGCGCGTTCGCTGGGTCTGAGTGCCGGCCAGTCGATGCGTCATGTGGTGCTGCCG CAGGCGTTCAAGCGCGTGCTGCCACCGCTGGCCGGGCAGTTCATCAGTCTGGTCAAAGACACTTCGCTGGTGTCGGTGAT CGCCATCACTGAGCTGCTGAAAAGCGGCCGTGAAGTCATCACCACGTCGTTCTCGCCGTTCGAGATCCTGTTCTGCGTCG CCGGCCTGTACCTGTTGATCAACCTGCCGCTGTCGAAAATCGCCAGCCGGCTTGAGCGGAGGCTCGCGCAAAGTGATTGA
Upstream 100 bases:
>100_bases ACATTGGAATGCGTTCCCTGTGGGAGCGGCGGTGCGACGATTCCACTTGCCCGCGAAGGCGGCCTCCCCGGCGACATAAC TTTCGGATTTCGCTAAACCC
Downstream 100 bases:
>100_bases AGTCCGCGATCTGGTAAAAGTCTTCGACACCCGTGGGCAAGTGGTGCGCGCGGTGGATAACGTCAGCACCCGTGTCGCCA AGGGCGAAGTGCTGGTGGTG
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKQKKAQWPWHVLTVLVLVGLAGALYYATSLMSYEWRWNRVPQYFAYQAEETQRATDISTVSELVRKGGSAQVTLRNDAG DEQHLTVDENSLQFAQGDDVAEGDVVGVTRHWAAGPLLWGLWTTLWLSVVSGVLGLLIGLATGLCRLSSNPTLRDLSTIY VELVRGTPLLVQIFIFYFFIGTVMNLSREFAGIAALSLFTGAYVAEIIRSGVQSIARGQNEAARSLGLSAGQSMRHVVLP QAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGLYLLINLPLSKIASRLERRLAQSD
Sequences:
>Translated_319_residues MKQKKAQWPWHVLTVLVLVGLAGALYYATSLMSYEWRWNRVPQYFAYQAEETQRATDISTVSELVRKGGSAQVTLRNDAG DEQHLTVDENSLQFAQGDDVAEGDVVGVTRHWAAGPLLWGLWTTLWLSVVSGVLGLLIGLATGLCRLSSNPTLRDLSTIY VELVRGTPLLVQIFIFYFFIGTVMNLSREFAGIAALSLFTGAYVAEIIRSGVQSIARGQNEAARSLGLSAGQSMRHVVLP QAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGLYLLINLPLSKIASRLERRLAQSD >Mature_319_residues MKQKKAQWPWHVLTVLVLVGLAGALYYATSLMSYEWRWNRVPQYFAYQAEETQRATDISTVSELVRKGGSAQVTLRNDAG DEQHLTVDENSLQFAQGDDVAEGDVVGVTRHWAAGPLLWGLWTTLWLSVVSGVLGLLIGLATGLCRLSSNPTLRDLSTIY VELVRGTPLLVQIFIFYFFIGTVMNLSREFAGIAALSLFTGAYVAEIIRSGVQSIARGQNEAARSLGLSAGQSMRHVVLP QAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGLYLLINLPLSKIASRLERRLAQSD
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=42.7884615384615, Blast_Score=148, Evalue=4e-37, Organism=Escherichia coli, GI1788226, Length=204, Percent_Identity=36.7647058823529, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=36.3636363636364, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1786874, Length=210, Percent_Identity=30, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788645, Length=220, Percent_Identity=31.8181818181818, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI87082239, Length=217, Percent_Identity=32.258064516129, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI48994930, Length=135, Percent_Identity=37.037037037037, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=27.2300469483568, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787087, Length=130, Percent_Identity=33.0769230769231, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787086, Length=210, Percent_Identity=29.0476190476191, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35034; Mature: 35034
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKKAQWPWHVLTVLVLVGLAGALYYATSLMSYEWRWNRVPQYFAYQAEETQRATDIST CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHH VSELVRKGGSAQVTLRNDAGDEQHLTVDENSLQFAQGDDVAEGDVVGVTRHWAAGPLLWG HHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHH LWTTLWLSVVSGVLGLLIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYFFI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH GTVMNLSREFAGIAALSLFTGAYVAEIIRSGVQSIARGQNEAARSLGLSAGQSMRHVVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH QAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGLYLLI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHH NLPLSKIASRLERRLAQSD HCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKQKKAQWPWHVLTVLVLVGLAGALYYATSLMSYEWRWNRVPQYFAYQAEETQRATDIST CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHH VSELVRKGGSAQVTLRNDAGDEQHLTVDENSLQFAQGDDVAEGDVVGVTRHWAAGPLLWG HHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHH LWTTLWLSVVSGVLGLLIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYFFI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH GTVMNLSREFAGIAALSLFTGAYVAEIIRSGVQSIARGQNEAARSLGLSAGQSMRHVVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH QAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGLYLLI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHH NLPLSKIASRLERRLAQSD HCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]