Click here to switch to the map view.

The map label for this gene is 77454856

Identifier: 77454856

GI number: 77454856

Start: 262337

End: 262849

Strand: Direct

Name: 77454856

Synonym: pREL1_0289

Alternate gene names: NA

Gene position: 262337-262849 (Clockwise)

Preceding gene: 77454855

Following gene: 77454857

Centisome position: 96.6

GC content: 67.45

Gene sequence:

>513_bases
GTGGACCGGCTGACCGCGCTGCTCGGTGTGGTGCGGGCATTTGCCCTGGTCGGCCGGTCGCGGGCCACCCATCACCGGCA
GGCGAACCCGACTCTGCGCCCGTACGGGCCACACCCCAAAGCCCGCCATCCTGCCGAGCTCACCGCCGCCGAGCGCGCCG
CGATATTGGAGGTGCTCACCAGCGATGGCTACGCCGATCTGTCCGTGGCCCAGGTGTGGGCCCGCGAGTTCGACGCCGGC
CGGTACTACTGCTCGCAGCGCACGATGCACCGGATCCTAGCCGCGCACCGGATGAACGGTGAGCGCCGCCGGCACGCCAC
CCATCCACCGCGCAAGATTCCCGAACTGGTCACTACCAGGCAAAATGACGTCTGGTCCTCCAGGGGATATCACGAAAATG
CGGGGCCCGACCAAGGGCATCTGGTACCACGCTCACGTCGTCATCGACATCTTCTCCCGCTACGTCGTGGGCTGGTGCAT
CGAGACCGTCGGAGACGGCGAACTAGCCGCTGA

Upstream 100 bases:

>100_bases
CGTTGGAGGTCATGGGAAAAGGTGTCGCGTTCTTGGAAGCGCTCTCCAGGAAGAACAAGGAGTGAGCCGGGCGGCCTGGC
GCACCTGGCAGGCCGAGACC

Downstream 100 bases:

>100_bases
CCTGGTCGCCGACGCCATCGCCGAGCAAGGCCGAGCACCGGGATATCTCCACGCCGACGGGGGCGCGGCGATGACCTCGA
AACCGCTGGCCTCACTCCTG

Product: putative transposase

Products: NA

Alternate protein names: Integrase; Integrase Catalytic Subunit; Transposase For Insertion Sequence Element; Integrase Catalytic Domain-Containing Protein; Transposase Of; Integrase Catalytic Region

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MDRLTALLGVVRAFALVGRSRATHHRQANPTLRPYGPHPKARHPAELTAAERAAILEVLTSDGYADLSVAQVWAREFDAG
RYYCSQRTMHRILAAHRMNGERRRHATHPPRKIPELVTTRQNDVWSSRGYHENAGPDQGHLVPRSRRHRHLLPLRRGLVH
RDRRRRRTSR

Sequences:

>Translated_170_residues
MDRLTALLGVVRAFALVGRSRATHHRQANPTLRPYGPHPKARHPAELTAAERAAILEVLTSDGYADLSVAQVWAREFDAG
RYYCSQRTMHRILAAHRMNGERRRHATHPPRKIPELVTTRQNDVWSSRGYHENAGPDQGHLVPRSRRHRHLLPLRRGLVH
RDRRRRRTSR
>Mature_170_residues
MDRLTALLGVVRAFALVGRSRATHHRQANPTLRPYGPHPKARHPAELTAAERAAILEVLTSDGYADLSVAQVWAREFDAG
RYYCSQRTMHRILAAHRMNGERRRHATHPPRKIPELVTTRQNDVWSSRGYHENAGPDQGHLVPRSRRHRHLLPLRRGLVH
RDRRRRRTSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19680; Mature: 19680

Theoretical pI: Translated: 12.23; Mature: 12.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLTALLGVVRAFALVGRSRATHHRQANPTLRPYGPHPKARHPAELTAAERAAILEVLT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SDGYADLSVAQVWAREFDAGRYYCSQRTMHRILAAHRMNGERRRHATHPPRKIPELVTTR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCC
QNDVWSSRGYHENAGPDQGHLVPRSRRHRHLLPLRRGLVHRDRRRRRTSR
CCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRLTALLGVVRAFALVGRSRATHHRQANPTLRPYGPHPKARHPAELTAAERAAILEVLT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SDGYADLSVAQVWAREFDAGRYYCSQRTMHRILAAHRMNGERRRHATHPPRKIPELVTTR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCC
QNDVWSSRGYHENAGPDQGHLVPRSRRHRHLLPLRRGLVHRDRRRRRTSR
CCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA