Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
---|---|
Accession | NC_007491 |
Length | 271,577 |
Click here to switch to the map view.
The map label for this gene is 77454845
Identifier: 77454845
GI number: 77454845
Start: 255500
End: 255856
Strand: Direct
Name: 77454845
Synonym: pREL1_0278
Alternate gene names: NA
Gene position: 255500-255856 (Clockwise)
Preceding gene: 77454842
Following gene: 77454847
Centisome position: 94.08
GC content: 64.71
Gene sequence:
>357_bases GTGAAGCGTACTTCGTGGTCGGCCGGTCTGTCGTTCTCCGCCTGTGATGTCGGGGTGATTTCTCACGCCGGGACGATCGC TCCCCGCCTTTTGGCTGATCGGGTCGGCCTGACCGCCGAACTGTCCAAGGCGATGGCACGCCGCCGGTCCGTCCCGATCC ACGACCGTGGTCGCGTGCTGACCGATGTCGCGGTCATGCTCGCCGGTGGCGGCGAGACCATCGCCGATATCCGCGTTCTG CGCCACCAATCCGGCCACGGCAACTCACCGAAGATCAGGCCGCGCCGACCTCAACGTCGGTGGAACGAGGTTAAGTCGGA ACCGATTGGTTTTTCCCGAGGATGCGGGAATCGGTGA
Upstream 100 bases:
>100_bases CTTCGGTTTTCTGGGCCGAAATAGACCGAAGTGCTTCCTGAGCAGGGGAAACTGGGAGTTGTCTAAAGCTCCAGGTTCTC AAGCAGAAAGCACTCGGTAG
Downstream 100 bases:
>100_bases GGCTCCGCACAACGCGGCGAACGAGGATTCCGATCGAAGCCGTTCAGGATTCGAGCCTGCGGTCACCAGGAGCGTAGCCG TGGTGATCACGGCAAACCCT
Product: putative transposase
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKRTSWSAGLSFSACDVGVISHAGTIAPRLLADRVGLTAELSKAMARRRSVPIHDRGRVLTDVAVMLAGGGETIADIRVL RHQSGHGNSPKIRPRRPQRRWNEVKSEPIGFSRGCGNR
Sequences:
>Translated_118_residues MKRTSWSAGLSFSACDVGVISHAGTIAPRLLADRVGLTAELSKAMARRRSVPIHDRGRVLTDVAVMLAGGGETIADIRVL RHQSGHGNSPKIRPRRPQRRWNEVKSEPIGFSRGCGNR >Mature_118_residues MKRTSWSAGLSFSACDVGVISHAGTIAPRLLADRVGLTAELSKAMARRRSVPIHDRGRVLTDVAVMLAGGGETIADIRVL RHQSGHGNSPKIRPRRPQRRWNEVKSEPIGFSRGCGNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12851; Mature: 12851
Theoretical pI: Translated: 12.14; Mature: 12.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTSWSAGLSFSACDVGVISHAGTIAPRLLADRVGLTAELSKAMARRRSVPIHDRGRVL CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHH TDVAVMLAGGGETIADIRVLRHQSGHGNSPKIRPRRPQRRWNEVKSEPIGFSRGCGNR HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKRTSWSAGLSFSACDVGVISHAGTIAPRLLADRVGLTAELSKAMARRRSVPIHDRGRVL CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHH TDVAVMLAGGGETIADIRVLRHQSGHGNSPKIRPRRPQRRWNEVKSEPIGFSRGCGNR HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA